Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 AC244015.2-201ENST00000616358 1861 ntBASIC9.84□□□□□ -0.83
PRAC1Q96KF2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 LBX2-AS1-202ENST00000603175 2083 ntBASIC9.84□□□□□ -0.83
PRAC1Q96KF2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PRAC1Q96KF2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
PRAC1Q96KF2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 OR6D1P-203ENST00000641209 4860 ntBASIC9.83□□□□□ -0.84
PRAC1Q96KF2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 PCDH8P1-201ENST00000428983 2773 ntBASIC9.83□□□□□ -0.84
PRAC1Q96KF2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 NOC2LP2-201ENST00000407594 1944 ntBASIC9.83□□□□□ -0.84
PRAC1Q96KF2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
PRAC1Q96KF2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PRAC1Q96KF2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms