RNA–Protein interactions for RNA: ENST00000006658.10

SPATA20-201, Transcript of spermatogenesis associated 20, humanhuman

TSL 1 (best) BASIC

Gene SPATA20, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA20-201ENST00000006658 NISCHQ9Y2I1 1504 aa32.02■■■□□ 2.72
SPATA20-201ENST00000006658 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
SPATA20-201ENST00000006658 ZCCHC6Q5VYS8 1495 aaKnown RBP26.96■■□□□ 1.91
SPATA20-201ENST00000006658 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
SPATA20-201ENST00000006658 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
SPATA20-201ENST00000006658 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
SPATA20-201ENST00000006658 PELP1Q8IZL8 1130 aaKnown RBP26.2■■□□□ 1.78
SPATA20-201ENST00000006658 ABCC9O60706 1549 aa26.07■■□□□ 1.76
SPATA20-201ENST00000006658 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
SPATA20-201ENST00000006658 HRCP23327 699 aa25.94■■□□□ 1.74
SPATA20-201ENST00000006658 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
SPATA20-201ENST00000006658 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
SPATA20-201ENST00000006658 NACADO15069 1562 aa25.57■■□□□ 1.68
SPATA20-201ENST00000006658 MYT1Q01538 1121 aa25.41■■□□□ 1.66
SPATA20-201ENST00000006658 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
SPATA20-201ENST00000006658 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
SPATA20-201ENST00000006658 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
SPATA20-201ENST00000006658 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
SPATA20-201ENST00000006658 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
SPATA20-201ENST00000006658 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
SPATA20-201ENST00000006658 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
SPATA20-201ENST00000006658 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
SPATA20-201ENST00000006658 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.57
SPATA20-201ENST00000006658 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.576e-7■■■■■ 27.5
SPATA20-201ENST00000006658 WIZO95785 1651 aa24.7■■□□□ 1.54
SPATA20-201ENST00000006658 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
SPATA20-201ENST00000006658 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
SPATA20-201ENST00000006658 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
SPATA20-201ENST00000006658 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
SPATA20-201ENST00000006658 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
SPATA20-201ENST00000006658 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
SPATA20-201ENST00000006658 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.46
SPATA20-201ENST00000006658 SMARCA2P51531 1590 aa24.14■■□□□ 1.46
SPATA20-201ENST00000006658 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
SPATA20-201ENST00000006658 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
SPATA20-201ENST00000006658 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
SPATA20-201ENST00000006658 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
SPATA20-201ENST00000006658 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
SPATA20-201ENST00000006658 TTBK1Q5TCY1 1321 aaPredicted RBP24.06■■□□□ 1.44
SPATA20-201ENST00000006658 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
SPATA20-201ENST00000006658 NEUROD1Q13562 356 aa24.03■■□□□ 1.44
SPATA20-201ENST00000006658 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
SPATA20-201ENST00000006658 GTF3C3Q9Y5Q9 886 aa23.98■■□□□ 1.43
SPATA20-201ENST00000006658 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
SPATA20-201ENST00000006658 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
SPATA20-201ENST00000006658 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
SPATA20-201ENST00000006658 CENPBP07199 599 aaPredicted RBP23.71■■□□□ 1.39
SPATA20-201ENST00000006658 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
SPATA20-201ENST00000006658 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
SPATA20-201ENST00000006658 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
SPATA20-201ENST00000006658 SOGA1O94964 1423 aa23.6■■□□□ 1.37
SPATA20-201ENST00000006658 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SPATA20-201ENST00000006658 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
SPATA20-201ENST00000006658 SYNJ1O43426 1573 aa23.5■■□□□ 1.35
SPATA20-201ENST00000006658 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
SPATA20-201ENST00000006658 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
SPATA20-201ENST00000006658 PRKCSHP14314 528 aaPredicted RBP23.34■■□□□ 1.33
SPATA20-201ENST00000006658 CFTRP13569 1480 aa23.33■■□□□ 1.33
SPATA20-201ENST00000006658 DIEXFQ68CQ4 756 aaKnown RBP23.29■■□□□ 1.32
SPATA20-201ENST00000006658 EEA1Q15075 1411 aa23.27■■□□□ 1.32
SPATA20-201ENST00000006658 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
SPATA20-201ENST00000006658 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
SPATA20-201ENST00000006658 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
SPATA20-201ENST00000006658 CUX1P39880 1505 aa23.2■■□□□ 1.3
SPATA20-201ENST00000006658 ANP32EQ9BTT0 268 aa23.19■■□□□ 1.3
SPATA20-201ENST00000006658 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
SPATA20-201ENST00000006658 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
SPATA20-201ENST00000006658 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
SPATA20-201ENST00000006658 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.3
SPATA20-201ENST00000006658 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
SPATA20-201ENST00000006658 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
SPATA20-201ENST00000006658 NESP48681 1621 aa23.05■■□□□ 1.28
SPATA20-201ENST00000006658 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
SPATA20-201ENST00000006658 YTHDC1Q96MU7 727 aaKnown RBP23.03■■□□□ 1.28
SPATA20-201ENST00000006658 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
SPATA20-201ENST00000006658 KIF21BO75037 1637 aa23■■□□□ 1.27
SPATA20-201ENST00000006658 RANGAP1P46060 587 aaPredicted RBP22.99■■□□□ 1.27
SPATA20-201ENST00000006658 FANCD2Q9BXW9 1451 aa22.97■■□□□ 1.27
SPATA20-201ENST00000006658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
SPATA20-201ENST00000006658 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
SPATA20-201ENST00000006658 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
SPATA20-201ENST00000006658 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
SPATA20-201ENST00000006658 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
SPATA20-201ENST00000006658 CLIP1P30622 1438 aa22.85■■□□□ 1.25
SPATA20-201ENST00000006658 CUX2O14529 1486 aa22.85■■□□□ 1.25
SPATA20-201ENST00000006658 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
SPATA20-201ENST00000006658 IGF1RP08069 1367 aa22.76■■□□□ 1.23
SPATA20-201ENST00000006658 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
SPATA20-201ENST00000006658 TSHZ2Q9NRE2 1034 aa22.75■■□□□ 1.23
SPATA20-201ENST00000006658 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
SPATA20-201ENST00000006658 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
SPATA20-201ENST00000006658 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
SPATA20-201ENST00000006658 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
SPATA20-201ENST00000006658 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
SPATA20-201ENST00000006658 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
SPATA20-201ENST00000006658 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
SPATA20-201ENST00000006658 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
SPATA20-201ENST00000006658 ZNF316A6NFI3 1004 aaPredicted RBP22.65■■□□□ 1.22
SPATA20-201ENST00000006658 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.21
SPATA20-201ENST00000006658 SUPT16HQ9Y5B9 1047 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms