RNA–Protein interactions for RNA: ENST00000370104.5

SRPK3-203, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRPK3, Length 1,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-203ENST00000370104 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
SRPK3-203ENST00000370104 CCDC180Q9P1Z9 1646 aa43.6■■■■■ 4.57
SRPK3-203ENST00000370104 ZCCHC6Q5VYS8 1495 aaKnown RBP42.13■■■■■ 4.33
SRPK3-203ENST00000370104 ABCC9O60706 1549 aa41.44■■■■■ 4.23
SRPK3-203ENST00000370104 DCAF1Q9Y4B6 1507 aa41.43■■■■■ 4.22
SRPK3-203ENST00000370104 DCAF8L2P0C7V8 631 aa41.3■■■■■ 4.2
SRPK3-203ENST00000370104 SHROOM4Q9ULL8 1493 aa41.02■■■■■ 4.16
SRPK3-203ENST00000370104 MYO15BQ96JP2 1530 aa40.86■■■■■ 4.13
SRPK3-203ENST00000370104 NACADO15069 1562 aa40.54■■■■■ 4.08
SRPK3-203ENST00000370104 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
SRPK3-203ENST00000370104 SCRIBQ14160 1630 aa40.11■■■■■ 4.01
SRPK3-203ENST00000370104 SUPT5HO00267 1087 aaKnown RBP39.61■■■■□ 3.93
SRPK3-203ENST00000370104 UNC13AQ9UPW8 1703 aa39.42■■■■□ 3.9
SRPK3-203ENST00000370104 BICRAQ9NZM4 1560 aa39.03■■■■□ 3.84
SRPK3-203ENST00000370104 RSF1Q96T23 1441 aaPredicted RBP38.97■■■■□ 3.83
SRPK3-203ENST00000370104 CECR2Q9BXF3 1484 aa38.93■■■■□ 3.82
SRPK3-203ENST00000370104 PABPN1Q86U42 306 aaKnown RBP eCLIP38.89■■■■□ 3.82
SRPK3-203ENST00000370104 MROH2BQ7Z745 1585 aa38.73■■■■□ 3.79
SRPK3-203ENST00000370104 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
SRPK3-203ENST00000370104 SMARCA4P51532 1647 aa38.48■■■■□ 3.75
SRPK3-203ENST00000370104 WIZO95785 1651 aa38.45■■■■□ 3.75
SRPK3-203ENST00000370104 CHIC1Q5VXU3 224 aa38.06■■■■□ 3.68
SRPK3-203ENST00000370104 TOP2AP11388 1531 aaKnown RBP38.02■■■■□ 3.68
SRPK3-203ENST00000370104 PEG3Q9GZU2 1588 aa38■■■■□ 3.67
SRPK3-203ENST00000370104 EIF4G1Q04637 1599 aaKnown RBP37.89■■■■□ 3.66
SRPK3-203ENST00000370104 ATAD2BQ9ULI0 1458 aa37.78■■■■□ 3.64
SRPK3-203ENST00000370104 SMARCA2P51531 1590 aa37.76■■■■□ 3.63
SRPK3-203ENST00000370104 CCDC88BA6NC98 1476 aa37.66■■■■□ 3.62
SRPK3-203ENST00000370104 BAZ1BQ9UIG0 1483 aaKnown RBP37.57■■■■□ 3.6
SRPK3-203ENST00000370104 CC2D2AQ9P2K1 1620 aa37.52■■■■□ 3.6
SRPK3-203ENST00000370104 NCAPD3P42695 1498 aa37.42■■■■□ 3.58
SRPK3-203ENST00000370104 HMGXB3Q12766 1538 aa37.37■■■■□ 3.57
SRPK3-203ENST00000370104 DNAJC5BQ9UF47 199 aa37.28■■■■□ 3.56
SRPK3-203ENST00000370104 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
SRPK3-203ENST00000370104 ABCC8Q09428 1581 aa36.94■■■■□ 3.5
SRPK3-203ENST00000370104 WRNQ14191 1432 aaPredicted RBP eCLIP36.65■■■■□ 3.46
SRPK3-203ENST00000370104 CFTRP13569 1480 aa36.65■■■■□ 3.46
SRPK3-203ENST00000370104 LOC105371045A0A1W2PR82 267 aa36.63■■■■□ 3.45
SRPK3-203ENST00000370104 FAM9AQ8IZU1 332 aaPredicted RBP36.55■■■■□ 3.44
SRPK3-203ENST00000370104 PRDM2Q13029 1718 aa36.53■■■■□ 3.44
SRPK3-203ENST00000370104 SYNJ1O43426 1573 aa36.51■■■■□ 3.44
SRPK3-203ENST00000370104 CADPSQ9ULU8 1353 aa36.47■■■■□ 3.43
SRPK3-203ENST00000370104 TOP2BQ02880 1626 aa36.35■■■■□ 3.41
SRPK3-203ENST00000370104 BIVM-ERCC5R4GMW8 1640 aa36.32■■■■□ 3.41
SRPK3-203ENST00000370104 SOGA1O94964 1423 aa36.29■■■■□ 3.4
SRPK3-203ENST00000370104 EEA1Q15075 1411 aa36.26■■■■□ 3.4
SRPK3-203ENST00000370104 CUX1P39880 1505 aa36.2■■■■□ 3.38
SRPK3-203ENST00000370104 NESP48681 1621 aa36.16■■■■□ 3.38
SRPK3-203ENST00000370104 RUSC2Q8N2Y8 1516 aa36.15■■■■□ 3.38
SRPK3-203ENST00000370104 LAMC3Q9Y6N6 1575 aa36.1■■■■□ 3.37
SRPK3-203ENST00000370104 FANCD2Q9BXW9 1451 aa36.06■■■■□ 3.36
SRPK3-203ENST00000370104 CSRNP3Q8WYN3 585 aa36.06■■■■□ 3.36
SRPK3-203ENST00000370104 EHMT2Q96KQ7 1210 aa36.01■■■■□ 3.35
SRPK3-203ENST00000370104 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
SRPK3-203ENST00000370104 KIF21BO75037 1637 aa35.8■■■■□ 3.32
SRPK3-203ENST00000370104 CEP164Q9UPV0 1460 aa35.8■■■■□ 3.32
SRPK3-203ENST00000370104 DNMBPQ6XZF7 1577 aa35.79■■■■□ 3.32
SRPK3-203ENST00000370104 GOLGA3Q08378 1498 aa35.76■■■■□ 3.32
SRPK3-203ENST00000370104 FGD5Q6ZNL6 1462 aa35.75■■■■□ 3.31
SRPK3-203ENST00000370104 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
SRPK3-203ENST00000370104 TNIKQ9UKE5 1360 aa35.72■■■■□ 3.31
SRPK3-203ENST00000370104 TOPBP1Q92547 1522 aa35.71■■■■□ 3.31
SRPK3-203ENST00000370104 KIF27Q86VH2 1401 aa35.71■■■■□ 3.31
SRPK3-203ENST00000370104 URB2Q14146 1524 aaKnown RBP35.61■■■■□ 3.29
SRPK3-203ENST00000370104 UBTFP17480 764 aaKnown RBP35.61■■■■□ 3.29
SRPK3-203ENST00000370104 ERCC6Q03468 1493 aa35.58■■■■□ 3.29
SRPK3-203ENST00000370104 CUX2O14529 1486 aa35.56■■■■□ 3.28
SRPK3-203ENST00000370104 POLA1P09884 1462 aaPredicted RBP35.55■■■■□ 3.28
SRPK3-203ENST00000370104 PRXQ9BXM0 1461 aa35.54■■■■□ 3.28
SRPK3-203ENST00000370104 RAPGEF2Q9Y4G8 1499 aa35.53■■■■□ 3.28
SRPK3-203ENST00000370104 CEP162Q5TB80 1403 aa35.53■■■■□ 3.28
SRPK3-203ENST00000370104 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
SRPK3-203ENST00000370104 ABCA10Q8WWZ4 1543 aa35.45■■■■□ 3.27
SRPK3-203ENST00000370104 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
SRPK3-203ENST00000370104 MRC2Q9UBG0 1479 aa35.43■■■■□ 3.26
SRPK3-203ENST00000370104 THOC2Q8NI27 1593 aaKnown RBP35.39■■■■□ 3.26
SRPK3-203ENST00000370104 IGF1RP08069 1367 aa35.39■■■■□ 3.26
SRPK3-203ENST00000370104 WDR97A6NE52 1622 aa35.34■■■■□ 3.25
SRPK3-203ENST00000370104 WDR62O43379 1518 aa35.3■■■■□ 3.24
SRPK3-203ENST00000370104 CARMIL1Q5VZK9 1371 aa35.21■■■■□ 3.23
SRPK3-203ENST00000370104 CLIP1P30622 1438 aa35.21■■■■□ 3.23
SRPK3-203ENST00000370104 TARBP1Q13395 1621 aaKnown RBP35.17■■■■□ 3.22
SRPK3-203ENST00000370104 PCGF6Q9BYE7 350 aa35.17■■■■□ 3.22
SRPK3-203ENST00000370104 ABCA5Q8WWZ7 1642 aa35.15■■■■□ 3.22
SRPK3-203ENST00000370104 TRIM26Q12899 539 aaPredicted RBP35.13■■■■□ 3.21
SRPK3-203ENST00000370104 CUL7Q14999 1698 aa35.1■■■■□ 3.21
SRPK3-203ENST00000370104 TDRD9Q8NDG6 1382 aaKnown RBP35.07■■■■□ 3.2
SRPK3-203ENST00000370104 GAPVD1Q14C86 1478 aa35.05■■■■□ 3.2
SRPK3-203ENST00000370104 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
SRPK3-203ENST00000370104 RANGAP1P46060 587 aaPredicted RBP34.94■■■■□ 3.18
SRPK3-203ENST00000370104 VPS8Q8N3P4 1428 aa34.93■■■■□ 3.18
SRPK3-203ENST00000370104 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
SRPK3-203ENST00000370104 PPARGC1BQ86YN6 1023 aaKnown RBP34.87■■■■□ 3.17
SRPK3-203ENST00000370104 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
SRPK3-203ENST00000370104 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.16
SRPK3-203ENST00000370104 ARHGAP35Q9NRY4 1499 aa34.8■■■■□ 3.16
SRPK3-203ENST00000370104 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
SRPK3-203ENST00000370104 CTTNBP2Q8WZ74 1663 aa34.77■■■■□ 3.16
SRPK3-203ENST00000370104 GRIN2BQ13224 1484 aa34.73■■■■□ 3.15
SRPK3-203ENST00000370104 FHAD1B1AJZ9 1412 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms