RNA–Protein interactions for RNA: ENST00000556336.5

RPGRIP1-210, Transcript of RPGR interacting protein 1, humanhuman

TSL 5 BASIC

Gene RPGRIP1, Length 2,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-210ENST00000556336 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
RPGRIP1-210ENST00000556336 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
RPGRIP1-210ENST00000556336 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
RPGRIP1-210ENST00000556336 SHROOM4Q9ULL8 1493 aa26.47■■□□□ 1.83
RPGRIP1-210ENST00000556336 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
RPGRIP1-210ENST00000556336 ABCC9O60706 1549 aa25.73■■□□□ 1.71
RPGRIP1-210ENST00000556336 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
RPGRIP1-210ENST00000556336 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
RPGRIP1-210ENST00000556336 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
RPGRIP1-210ENST00000556336 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
RPGRIP1-210ENST00000556336 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
RPGRIP1-210ENST00000556336 NACADO15069 1562 aa25.09■■□□□ 1.61
RPGRIP1-210ENST00000556336 MYT1Q01538 1121 aa24.93■■□□□ 1.58
RPGRIP1-210ENST00000556336 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
RPGRIP1-210ENST00000556336 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
RPGRIP1-210ENST00000556336 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
RPGRIP1-210ENST00000556336 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
RPGRIP1-210ENST00000556336 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
RPGRIP1-210ENST00000556336 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
RPGRIP1-210ENST00000556336 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.49
RPGRIP1-210ENST00000556336 WIZO95785 1651 aa24.21■■□□□ 1.47
RPGRIP1-210ENST00000556336 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.46
RPGRIP1-210ENST00000556336 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
RPGRIP1-210ENST00000556336 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
RPGRIP1-210ENST00000556336 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
RPGRIP1-210ENST00000556336 HRCP23327 699 aa23.9■■□□□ 1.42
RPGRIP1-210ENST00000556336 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
RPGRIP1-210ENST00000556336 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
RPGRIP1-210ENST00000556336 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
RPGRIP1-210ENST00000556336 FAM9AQ8IZU1 332 aaPredicted RBP23.77■■□□□ 1.4
RPGRIP1-210ENST00000556336 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
RPGRIP1-210ENST00000556336 PRKCSHP14314 528 aaPredicted RBP23.67■■□□□ 1.38
RPGRIP1-210ENST00000556336 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
RPGRIP1-210ENST00000556336 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
RPGRIP1-210ENST00000556336 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
RPGRIP1-210ENST00000556336 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
RPGRIP1-210ENST00000556336 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
RPGRIP1-210ENST00000556336 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
RPGRIP1-210ENST00000556336 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
RPGRIP1-210ENST00000556336 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
RPGRIP1-210ENST00000556336 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
RPGRIP1-210ENST00000556336 BCL11AQ9H165 835 aa23.28■■□□□ 1.32
RPGRIP1-210ENST00000556336 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
RPGRIP1-210ENST00000556336 SOGA1O94964 1423 aa23.16■■□□□ 1.3
RPGRIP1-210ENST00000556336 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
RPGRIP1-210ENST00000556336 HMGXB3Q12766 1538 aa23.14■■□□□ 1.29
RPGRIP1-210ENST00000556336 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
RPGRIP1-210ENST00000556336 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.29
RPGRIP1-210ENST00000556336 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
RPGRIP1-210ENST00000556336 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
RPGRIP1-210ENST00000556336 ERICH6Q7L0X2 663 aa23■■□□□ 1.27
RPGRIP1-210ENST00000556336 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
RPGRIP1-210ENST00000556336 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
RPGRIP1-210ENST00000556336 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
RPGRIP1-210ENST00000556336 CFTRP13569 1480 aa22.9■■□□□ 1.26
RPGRIP1-210ENST00000556336 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
RPGRIP1-210ENST00000556336 APLP2Q06481 763 aa22.81■■□□□ 1.24
RPGRIP1-210ENST00000556336 EEA1Q15075 1411 aa22.78■■□□□ 1.24
RPGRIP1-210ENST00000556336 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
RPGRIP1-210ENST00000556336 CUX1P39880 1505 aa22.75■■□□□ 1.23
RPGRIP1-210ENST00000556336 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
RPGRIP1-210ENST00000556336 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
RPGRIP1-210ENST00000556336 NESP48681 1621 aa22.7■■□□□ 1.23
RPGRIP1-210ENST00000556336 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
RPGRIP1-210ENST00000556336 TNIKQ9UKE5 1360 aa22.66■■□□□ 1.22
RPGRIP1-210ENST00000556336 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
RPGRIP1-210ENST00000556336 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
RPGRIP1-210ENST00000556336 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
RPGRIP1-210ENST00000556336 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
RPGRIP1-210ENST00000556336 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
RPGRIP1-210ENST00000556336 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.21
RPGRIP1-210ENST00000556336 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
RPGRIP1-210ENST00000556336 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
RPGRIP1-210ENST00000556336 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
RPGRIP1-210ENST00000556336 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
RPGRIP1-210ENST00000556336 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
RPGRIP1-210ENST00000556336 KIF21BO75037 1637 aa22.47■■□□□ 1.19
RPGRIP1-210ENST00000556336 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
RPGRIP1-210ENST00000556336 CUX2O14529 1486 aa22.46■■□□□ 1.19
RPGRIP1-210ENST00000556336 CLIP1P30622 1438 aa22.42■■□□□ 1.18
RPGRIP1-210ENST00000556336 NEUROD1Q13562 356 aa22.39■■□□□ 1.18
RPGRIP1-210ENST00000556336 PRXQ9BXM0 1461 aa22.39■■□□□ 1.17
RPGRIP1-210ENST00000556336 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
RPGRIP1-210ENST00000556336 IGF1RP08069 1367 aa22.37■■□□□ 1.17
RPGRIP1-210ENST00000556336 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
RPGRIP1-210ENST00000556336 LAMC3Q9Y6N6 1575 aa22.34■■□□□ 1.17
RPGRIP1-210ENST00000556336 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
RPGRIP1-210ENST00000556336 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
RPGRIP1-210ENST00000556336 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
RPGRIP1-210ENST00000556336 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
RPGRIP1-210ENST00000556336 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
RPGRIP1-210ENST00000556336 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
RPGRIP1-210ENST00000556336 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
RPGRIP1-210ENST00000556336 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
RPGRIP1-210ENST00000556336 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
RPGRIP1-210ENST00000556336 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
RPGRIP1-210ENST00000556336 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
RPGRIP1-210ENST00000556336 ANP32EQ9BTT0 268 aa22.12■■□□□ 1.13
RPGRIP1-210ENST00000556336 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
RPGRIP1-210ENST00000556336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms