RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
RPH3AL-222ENST00000618002 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
RPH3AL-222ENST00000618002 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
RPH3AL-222ENST00000618002 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
RPH3AL-222ENST00000618002 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
RPH3AL-222ENST00000618002 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
RPH3AL-222ENST00000618002 CHIC1Q5VXU3 224 aa29.03■■■□□ 2.24
RPH3AL-222ENST00000618002 HRCP23327 699 aa28.95■■■□□ 2.23
RPH3AL-222ENST00000618002 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
RPH3AL-222ENST00000618002 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
RPH3AL-222ENST00000618002 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
RPH3AL-222ENST00000618002 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
RPH3AL-222ENST00000618002 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
RPH3AL-222ENST00000618002 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
RPH3AL-222ENST00000618002 ABCC9O60706 1549 aa27.77■■■□□ 2.04
RPH3AL-222ENST00000618002 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
RPH3AL-222ENST00000618002 TRIM41Q8WV44 630 aa27.54■■■□□ 2
RPH3AL-222ENST00000618002 ZEB1P37275 1124 aaPredicted RBP27.5■■□□□ 1.99
RPH3AL-222ENST00000618002 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
RPH3AL-222ENST00000618002 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
RPH3AL-222ENST00000618002 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
RPH3AL-222ENST00000618002 EHMT2Q96KQ7 1210 aa27.19■■□□□ 1.94
RPH3AL-222ENST00000618002 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
RPH3AL-222ENST00000618002 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
RPH3AL-222ENST00000618002 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
RPH3AL-222ENST00000618002 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
RPH3AL-222ENST00000618002 WIZO95785 1651 aa26.83■■□□□ 1.89
RPH3AL-222ENST00000618002 NACADO15069 1562 aa26.82■■□□□ 1.88
RPH3AL-222ENST00000618002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
RPH3AL-222ENST00000618002 CCER1Q8TC90 406 aaPredicted RBP26.71■■□□□ 1.87
RPH3AL-222ENST00000618002 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
RPH3AL-222ENST00000618002 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
RPH3AL-222ENST00000618002 ACIN1Q9UKV3 1341 aaKnown RBP26.56■■□□□ 1.84
RPH3AL-222ENST00000618002 NEUROD1Q13562 356 aa26.52■■□□□ 1.84
RPH3AL-222ENST00000618002 WRNQ14191 1432 aaPredicted RBP eCLIP26.46■■□□□ 1.83
RPH3AL-222ENST00000618002 DIEXFQ68CQ4 756 aaKnown RBP26.46■■□□□ 1.83
RPH3AL-222ENST00000618002 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
RPH3AL-222ENST00000618002 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
RPH3AL-222ENST00000618002 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
RPH3AL-222ENST00000618002 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
RPH3AL-222ENST00000618002 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
RPH3AL-222ENST00000618002 SOGA1O94964 1423 aa26.32■■□□□ 1.8
RPH3AL-222ENST00000618002 TNIKQ9UKE5 1360 aa26.3■■□□□ 1.8
RPH3AL-222ENST00000618002 CENPBP07199 599 aaPredicted RBP26.29■■□□□ 1.8
RPH3AL-222ENST00000618002 GTF3C3Q9Y5Q9 886 aa26.29■■□□□ 1.8
RPH3AL-222ENST00000618002 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
RPH3AL-222ENST00000618002 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
RPH3AL-222ENST00000618002 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
RPH3AL-222ENST00000618002 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
RPH3AL-222ENST00000618002 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
RPH3AL-222ENST00000618002 EEA1Q15075 1411 aa26.15■■□□□ 1.78
RPH3AL-222ENST00000618002 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
RPH3AL-222ENST00000618002 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
RPH3AL-222ENST00000618002 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
RPH3AL-222ENST00000618002 HNRNPUL2Q1KMD3 747 aaKnown RBP25.91■■□□□ 1.74
RPH3AL-222ENST00000618002 YTHDC1Q96MU7 727 aaKnown RBP25.9■■□□□ 1.74
RPH3AL-222ENST00000618002 MIER1Q8N108 512 aa25.86■■□□□ 1.73
RPH3AL-222ENST00000618002 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
RPH3AL-222ENST00000618002 CLIP1P30622 1438 aa25.79■■□□□ 1.72
RPH3AL-222ENST00000618002 KIF21BO75037 1637 aa25.77■■□□□ 1.72
RPH3AL-222ENST00000618002 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
RPH3AL-222ENST00000618002 VPS8Q8N3P4 1428 aa25.73■■□□□ 1.71
RPH3AL-222ENST00000618002 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
RPH3AL-222ENST00000618002 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
RPH3AL-222ENST00000618002 MYT1Q01538 1121 aa25.65■■□□□ 1.7
RPH3AL-222ENST00000618002 APLP2Q06481 763 aa25.65■■□□□ 1.7
RPH3AL-222ENST00000618002 RAPGEF2Q9Y4G8 1499 aa25.63■■□□□ 1.69
RPH3AL-222ENST00000618002 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
RPH3AL-222ENST00000618002 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
RPH3AL-222ENST00000618002 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
RPH3AL-222ENST00000618002 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
RPH3AL-222ENST00000618002 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
RPH3AL-222ENST00000618002 DHX57Q6P158 1386 aaKnown RBP25.42■■□□□ 1.66
RPH3AL-222ENST00000618002 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
RPH3AL-222ENST00000618002 KANK4Q5T7N3 995 aaPredicted RBP25.33■■□□□ 1.65
RPH3AL-222ENST00000618002 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
RPH3AL-222ENST00000618002 PRXQ9BXM0 1461 aa25.29■■□□□ 1.64
RPH3AL-222ENST00000618002 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
RPH3AL-222ENST00000618002 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
RPH3AL-222ENST00000618002 SUPT16HQ9Y5B9 1047 aaKnown RBP25.21■■□□□ 1.63
RPH3AL-222ENST00000618002 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.63
RPH3AL-222ENST00000618002 CUX2O14529 1486 aa25.12■■□□□ 1.61
RPH3AL-222ENST00000618002 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
RPH3AL-222ENST00000618002 CUX1P39880 1505 aa25.05■■□□□ 1.6
RPH3AL-222ENST00000618002 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
RPH3AL-222ENST00000618002 ITGAEP38570 1179 aa25.04■■□□□ 1.6
RPH3AL-222ENST00000618002 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
RPH3AL-222ENST00000618002 KCNH8Q96L42 1107 aa24.96■■□□□ 1.59
RPH3AL-222ENST00000618002 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
RPH3AL-222ENST00000618002 TSHZ2Q9NRE2 1034 aa24.92■■□□□ 1.58
RPH3AL-222ENST00000618002 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
RPH3AL-222ENST00000618002 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
RPH3AL-222ENST00000618002 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
RPH3AL-222ENST00000618002 CFTRP13569 1480 aa24.83■■□□□ 1.57
RPH3AL-222ENST00000618002 SETD5Q9C0A6 1442 aa24.81■■□□□ 1.56
RPH3AL-222ENST00000618002 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
RPH3AL-222ENST00000618002 IGF1RP08069 1367 aa24.79■■□□□ 1.56
RPH3AL-222ENST00000618002 MAP3K1Q13233 1512 aa24.77■■□□□ 1.56
RPH3AL-222ENST00000618002 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
RPH3AL-222ENST00000618002 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms