RNA–Protein interactions for RNA: ENST00000378373.5

ARHGEF16-202, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,211 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-202ENST00000378373 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
ARHGEF16-202ENST00000378373 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
ARHGEF16-202ENST00000378373 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
ARHGEF16-202ENST00000378373 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
ARHGEF16-202ENST00000378373 HRCP23327 699 aa28.06■■■□□ 2.08
ARHGEF16-202ENST00000378373 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
ARHGEF16-202ENST00000378373 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
ARHGEF16-202ENST00000378373 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
ARHGEF16-202ENST00000378373 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
ARHGEF16-202ENST00000378373 PCGF6Q9BYE7 350 aa27.49■■□□□ 1.99
ARHGEF16-202ENST00000378373 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
ARHGEF16-202ENST00000378373 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
ARHGEF16-202ENST00000378373 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
ARHGEF16-202ENST00000378373 ABCC9O60706 1549 aa26.99■■□□□ 1.91
ARHGEF16-202ENST00000378373 NACADO15069 1562 aa26.91■■□□□ 1.9
ARHGEF16-202ENST00000378373 PELP1Q8IZL8 1130 aaKnown RBP26.88■■□□□ 1.89
ARHGEF16-202ENST00000378373 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
ARHGEF16-202ENST00000378373 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
ARHGEF16-202ENST00000378373 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
ARHGEF16-202ENST00000378373 ZEB1P37275 1124 aaPredicted RBP26.55■■□□□ 1.84
ARHGEF16-202ENST00000378373 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
ARHGEF16-202ENST00000378373 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
ARHGEF16-202ENST00000378373 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
ARHGEF16-202ENST00000378373 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
ARHGEF16-202ENST00000378373 WIZO95785 1651 aa26.18■■□□□ 1.78
ARHGEF16-202ENST00000378373 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
ARHGEF16-202ENST00000378373 UNC13AQ9UPW8 1703 aa26.07■■□□□ 1.76
ARHGEF16-202ENST00000378373 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
ARHGEF16-202ENST00000378373 SMARCA4P51532 1647 aa25.91■■□□□ 1.74
ARHGEF16-202ENST00000378373 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
ARHGEF16-202ENST00000378373 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
ARHGEF16-202ENST00000378373 MYT1Q01538 1121 aa25.82■■□□□ 1.72
ARHGEF16-202ENST00000378373 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
ARHGEF16-202ENST00000378373 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
ARHGEF16-202ENST00000378373 NEUROD1Q13562 356 aa25.73■■□□□ 1.71
ARHGEF16-202ENST00000378373 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.718e-8■■■□□ 14.7
ARHGEF16-202ENST00000378373 FAM9AQ8IZU1 332 aaPredicted RBP25.73■■□□□ 1.71
ARHGEF16-202ENST00000378373 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
ARHGEF16-202ENST00000378373 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
ARHGEF16-202ENST00000378373 GTF3C3Q9Y5Q9 886 aa25.58■■□□□ 1.69
ARHGEF16-202ENST00000378373 CENPBP07199 599 aaPredicted RBP25.56■■□□□ 1.68
ARHGEF16-202ENST00000378373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
ARHGEF16-202ENST00000378373 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
ARHGEF16-202ENST00000378373 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
ARHGEF16-202ENST00000378373 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
ARHGEF16-202ENST00000378373 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
ARHGEF16-202ENST00000378373 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
ARHGEF16-202ENST00000378373 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.64
ARHGEF16-202ENST00000378373 SOGA1O94964 1423 aa25.2■■□□□ 1.62
ARHGEF16-202ENST00000378373 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
ARHGEF16-202ENST00000378373 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
ARHGEF16-202ENST00000378373 EEA1Q15075 1411 aa25.09■■□□□ 1.61
ARHGEF16-202ENST00000378373 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
ARHGEF16-202ENST00000378373 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
ARHGEF16-202ENST00000378373 CSRNP3Q8WYN3 585 aa25.04■■□□□ 1.6
ARHGEF16-202ENST00000378373 SYNJ1O43426 1573 aa25■■□□□ 1.59
ARHGEF16-202ENST00000378373 TNIKQ9UKE5 1360 aa24.98■■□□□ 1.59
ARHGEF16-202ENST00000378373 CEP162Q5TB80 1403 aa24.94■■□□□ 1.58
ARHGEF16-202ENST00000378373 YTHDC1Q96MU7 727 aaKnown RBP24.94■■□□□ 1.58
ARHGEF16-202ENST00000378373 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
ARHGEF16-202ENST00000378373 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
ARHGEF16-202ENST00000378373 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
ARHGEF16-202ENST00000378373 GOLGA3Q08378 1498 aa24.86■■□□□ 1.57
ARHGEF16-202ENST00000378373 MIER1Q8N108 512 aa24.84■■□□□ 1.57
ARHGEF16-202ENST00000378373 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
ARHGEF16-202ENST00000378373 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
ARHGEF16-202ENST00000378373 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
ARHGEF16-202ENST00000378373 KIF21BO75037 1637 aa24.75■■□□□ 1.55
ARHGEF16-202ENST00000378373 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
ARHGEF16-202ENST00000378373 CFTRP13569 1480 aa24.62■■□□□ 1.53
ARHGEF16-202ENST00000378373 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
ARHGEF16-202ENST00000378373 CUX1P39880 1505 aa24.57■■□□□ 1.52
ARHGEF16-202ENST00000378373 CLIP1P30622 1438 aa24.54■■□□□ 1.52
ARHGEF16-202ENST00000378373 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
ARHGEF16-202ENST00000378373 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
ARHGEF16-202ENST00000378373 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
ARHGEF16-202ENST00000378373 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
ARHGEF16-202ENST00000378373 SUPT16HQ9Y5B9 1047 aaKnown RBP24.42■■□□□ 1.5
ARHGEF16-202ENST00000378373 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
ARHGEF16-202ENST00000378373 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
ARHGEF16-202ENST00000378373 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
ARHGEF16-202ENST00000378373 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
ARHGEF16-202ENST00000378373 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
ARHGEF16-202ENST00000378373 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF16-202ENST00000378373 TSHZ2Q9NRE2 1034 aa24.27■■□□□ 1.48
ARHGEF16-202ENST00000378373 ANP32EQ9BTT0 268 aa24.26■■□□□ 1.47
ARHGEF16-202ENST00000378373 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
ARHGEF16-202ENST00000378373 APLP2Q06481 763 aa24.19■■□□□ 1.46
ARHGEF16-202ENST00000378373 CUX2O14529 1486 aa24.17■■□□□ 1.46
ARHGEF16-202ENST00000378373 IGF1RP08069 1367 aa24.16■■□□□ 1.46
ARHGEF16-202ENST00000378373 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
ARHGEF16-202ENST00000378373 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
ARHGEF16-202ENST00000378373 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
ARHGEF16-202ENST00000378373 ARHGAP35Q9NRY4 1499 aa24.06■■□□□ 1.44
ARHGEF16-202ENST00000378373 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
ARHGEF16-202ENST00000378373 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
ARHGEF16-202ENST00000378373 KANK4Q5T7N3 995 aaPredicted RBP24.01■■□□□ 1.43
ARHGEF16-202ENST00000378373 NESP48681 1621 aa24■■□□□ 1.43
ARHGEF16-202ENST00000378373 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
ARHGEF16-202ENST00000378373 TOPBP1Q92547 1522 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms