RNA–Protein interactions for RNA: ENST00000374907.7

ITGAV-202, Transcript of integrin subunit alpha V, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGAV, Length 6,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-202ENST00000374907 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
ITGAV-202ENST00000374907 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
ITGAV-202ENST00000374907 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.85
ITGAV-202ENST00000374907 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
ITGAV-202ENST00000374907 APLP2Q06481 763 aa26.1■■□□□ 1.77
ITGAV-202ENST00000374907 PELP1Q8IZL8 1130 aaKnown RBP26.09■■□□□ 1.77
ITGAV-202ENST00000374907 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
ITGAV-202ENST00000374907 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
ITGAV-202ENST00000374907 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.71
ITGAV-202ENST00000374907 ATP1B4Q9UN42 357 aaPredicted RBP25.68■■□□□ 1.7
ITGAV-202ENST00000374907 ERICH6Q7L0X2 663 aa25.38■■□□□ 1.65
ITGAV-202ENST00000374907 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
ITGAV-202ENST00000374907 CCER1Q8TC90 406 aaPredicted RBP25.02■■□□□ 1.6
ITGAV-202ENST00000374907 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
ITGAV-202ENST00000374907 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
ITGAV-202ENST00000374907 UBTFP17480 764 aaKnown RBP24.7■■□□□ 1.54
ITGAV-202ENST00000374907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
ITGAV-202ENST00000374907 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
ITGAV-202ENST00000374907 POLR3GLQ9BT43 218 aa24.64■■□□□ 1.54
ITGAV-202ENST00000374907 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
ITGAV-202ENST00000374907 NEFLP07196 543 aa24.57■■□□□ 1.52
ITGAV-202ENST00000374907 SLC4A1APQ9BWU0 796 aaKnown RBP24.57■■□□□ 1.52
ITGAV-202ENST00000374907 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
ITGAV-202ENST00000374907 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
ITGAV-202ENST00000374907 YTHDC1Q96MU7 727 aaKnown RBP24.44■■□□□ 1.5
ITGAV-202ENST00000374907 CNGB1Q14028 1251 aaPredicted RBP24.44■■□□□ 1.5
ITGAV-202ENST00000374907 DAXXQ9UER7 740 aaPredicted RBP24.36■■□□□ 1.49
ITGAV-202ENST00000374907 MYT1Q01538 1121 aa24.36■■□□□ 1.49
ITGAV-202ENST00000374907 ITGAEP38570 1179 aa24.27■■□□□ 1.48
ITGAV-202ENST00000374907 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
ITGAV-202ENST00000374907 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
ITGAV-202ENST00000374907 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
ITGAV-202ENST00000374907 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
ITGAV-202ENST00000374907 BCANQ96GW7 911 aa23.82■■□□□ 1.4
ITGAV-202ENST00000374907 BCL11AQ9H165 835 aa23.73■■□□□ 1.39
ITGAV-202ENST00000374907 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
ITGAV-202ENST00000374907 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
ITGAV-202ENST00000374907 FBLN2P98095 1184 aa23.56■■□□□ 1.36
ITGAV-202ENST00000374907 ZBTB47Q9UFB7 747 aaPredicted RBP23.55■■□□□ 1.36
ITGAV-202ENST00000374907 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
ITGAV-202ENST00000374907 FAM50AQ14320 339 aaKnown RBP23.44■■□□□ 1.34
ITGAV-202ENST00000374907 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.34
ITGAV-202ENST00000374907 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
ITGAV-202ENST00000374907 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
ITGAV-202ENST00000374907 NEFMP07197 916 aa23.22■■□□□ 1.31
ITGAV-202ENST00000374907 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
ITGAV-202ENST00000374907 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
ITGAV-202ENST00000374907 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
ITGAV-202ENST00000374907 A0A0G2JS52 829 aa23.11■■□□□ 1.29
ITGAV-202ENST00000374907 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
ITGAV-202ENST00000374907 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
ITGAV-202ENST00000374907 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
ITGAV-202ENST00000374907 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
ITGAV-202ENST00000374907 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.26
ITGAV-202ENST00000374907 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
ITGAV-202ENST00000374907 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
ITGAV-202ENST00000374907 PLEKHG5O94827 1062 aa22.87■■□□□ 1.25
ITGAV-202ENST00000374907 HRCP23327 699 aa22.82■■□□□ 1.24
ITGAV-202ENST00000374907 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
ITGAV-202ENST00000374907 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
ITGAV-202ENST00000374907 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
ITGAV-202ENST00000374907 ANP32CO43423 234 aa22.73■■□□□ 1.23
ITGAV-202ENST00000374907 ABCC9O60706 1549 aa22.65■■□□□ 1.22
ITGAV-202ENST00000374907 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
ITGAV-202ENST00000374907 CDK11AQ9UQ88 783 aaPredicted RBP22.6■■□□□ 1.21
ITGAV-202ENST00000374907 DIEXFQ68CQ4 756 aaKnown RBP22.59■■□□□ 1.21
ITGAV-202ENST00000374907 HSP90AA1P07900 732 aaKnown RBP22.58■■□□□ 1.21
ITGAV-202ENST00000374907 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.2
ITGAV-202ENST00000374907 C14orf37Q86TY3 774 aa22.57■■□□□ 1.2
ITGAV-202ENST00000374907 CDK11BP21127 795 aaKnown RBP22.55■■□□□ 1.2
ITGAV-202ENST00000374907 TULP1O00294 542 aaPredicted RBP22.52■■□□□ 1.19
ITGAV-202ENST00000374907 HAP1P54257 671 aaPredicted RBP22.52■■□□□ 1.19
ITGAV-202ENST00000374907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.192e-6■□□□□ 8.8
ITGAV-202ENST00000374907 ARXQ96QS3 562 aa22.44■■□□□ 1.18
ITGAV-202ENST00000374907 ANP32BQ92688 251 aaKnown RBP22.43■■□□□ 1.18
ITGAV-202ENST00000374907 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
ITGAV-202ENST00000374907 ARID4BQ4LE39 1312 aaPredicted RBP22.3■■□□□ 1.16
ITGAV-202ENST00000374907 ANP32AP39687 249 aaKnown RBP22.29■■□□□ 1.16
ITGAV-202ENST00000374907 NPHP1O15259 732 aa22.28■■□□□ 1.16
ITGAV-202ENST00000374907 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
ITGAV-202ENST00000374907 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
ITGAV-202ENST00000374907 NCBP3Q53F19 620 aaKnown RBP22.22■■□□□ 1.15
ITGAV-202ENST00000374907 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
ITGAV-202ENST00000374907 LMOD2Q6P5Q4 547 aa22.11■■□□□ 1.13
ITGAV-202ENST00000374907 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
ITGAV-202ENST00000374907 MYH16Q9H6N6 1097 aa22.08■■□□□ 1.13
ITGAV-202ENST00000374907 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.12
ITGAV-202ENST00000374907 TAOK2Q9UL54 1235 aa22.07■■□□□ 1.12
ITGAV-202ENST00000374907 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
ITGAV-202ENST00000374907 EIF5BO60841 1220 aaKnown RBP22.04■■□□□ 1.12
ITGAV-202ENST00000374907 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
ITGAV-202ENST00000374907 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
ITGAV-202ENST00000374907 GOLGA6L2Q8N9W4 650 aaPredicted RBP22■■□□□ 1.11
ITGAV-202ENST00000374907 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
ITGAV-202ENST00000374907 TPRNQ4KMQ1 711 aa21.96■■□□□ 1.11
ITGAV-202ENST00000374907 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
ITGAV-202ENST00000374907 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.11
ITGAV-202ENST00000374907 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
ITGAV-202ENST00000374907 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
ITGAV-202ENST00000374907 CLSTN1O94985 981 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms