Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
VGLL3A8MV65 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VGLL3A8MV65 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.67■□□□□ 0.74
VGLL3A8MV65 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 HYMAI-201ENST00000635591 3347 ntBASIC19.66■□□□□ 0.74
VGLL3A8MV65 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 AC027702.1-201ENST00000563810 1770 ntBASIC19.66■□□□□ 0.74
VGLL3A8MV65 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
VGLL3A8MV65 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VGLL3A8MV65 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 AC099778.1-201ENST00000568593 1911 ntBASIC19.65■□□□□ 0.74
VGLL3A8MV65 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VGLL3A8MV65 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.65■□□□□ 0.74
VGLL3A8MV65 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.64■□□□□ 0.74
VGLL3A8MV65 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VGLL3A8MV65 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 AL592293.1-201ENST00000502889 1188 ntBASIC19.64■□□□□ 0.73
VGLL3A8MV65 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 HTR7P1-202ENST00000624664 4411 ntBASIC19.64■□□□□ 0.73
VGLL3A8MV65 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VGLL3A8MV65 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.64■□□□□ 0.73
VGLL3A8MV65 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VGLL3A8MV65 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms