RNA–Protein interactions for RNA: ENST00000506784.5

CDK18-217, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best) BASIC

Gene CDK18, Length 2,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-217ENST00000506784 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
CDK18-217ENST00000506784 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
CDK18-217ENST00000506784 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
CDK18-217ENST00000506784 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
CDK18-217ENST00000506784 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
CDK18-217ENST00000506784 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
CDK18-217ENST00000506784 SUPT5HO00267 1087 aaKnown RBP33.29■■■□□ 2.92
CDK18-217ENST00000506784 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
CDK18-217ENST00000506784 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
CDK18-217ENST00000506784 ABCC9O60706 1549 aa32.46■■■□□ 2.79
CDK18-217ENST00000506784 NACADO15069 1562 aa32.39■■■□□ 2.78
CDK18-217ENST00000506784 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
CDK18-217ENST00000506784 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
CDK18-217ENST00000506784 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
CDK18-217ENST00000506784 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.67
CDK18-217ENST00000506784 MROH2BQ7Z745 1585 aa31.61■■■□□ 2.65
CDK18-217ENST00000506784 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
CDK18-217ENST00000506784 WIZO95785 1651 aa31.45■■■□□ 2.63
CDK18-217ENST00000506784 BAZ1AQ9NRL2 1556 aaPredicted RBP31.38■■■□□ 2.61
CDK18-217ENST00000506784 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
CDK18-217ENST00000506784 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
CDK18-217ENST00000506784 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
CDK18-217ENST00000506784 BICRAQ9NZM4 1560 aa31.03■■■□□ 2.56
CDK18-217ENST00000506784 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
CDK18-217ENST00000506784 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
CDK18-217ENST00000506784 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
CDK18-217ENST00000506784 PABPN1Q86U42 306 aaKnown RBP eCLIP30.81■■■□□ 2.526e-7■■□□□ 12
CDK18-217ENST00000506784 PCGF6Q9BYE7 350 aa30.8■■■□□ 2.52
CDK18-217ENST00000506784 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
CDK18-217ENST00000506784 FAM9AQ8IZU1 332 aaPredicted RBP30.73■■■□□ 2.51
CDK18-217ENST00000506784 HRCP23327 699 aa30.67■■■□□ 2.5
CDK18-217ENST00000506784 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
CDK18-217ENST00000506784 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
CDK18-217ENST00000506784 TRIM26Q12899 539 aaPredicted RBP30.46■■■□□ 2.47
CDK18-217ENST00000506784 ATAD2BQ9ULI0 1458 aa30.39■■■□□ 2.46
CDK18-217ENST00000506784 EHMT2Q96KQ7 1210 aa30.35■■■□□ 2.45
CDK18-217ENST00000506784 BAZ1BQ9UIG0 1483 aaKnown RBP30.28■■■□□ 2.44
CDK18-217ENST00000506784 SOGA1O94964 1423 aa30.13■■■□□ 2.41
CDK18-217ENST00000506784 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
CDK18-217ENST00000506784 EEA1Q15075 1411 aa30.1■■■□□ 2.41
CDK18-217ENST00000506784 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
CDK18-217ENST00000506784 RUSC2Q8N2Y8 1516 aa30■■■□□ 2.39
CDK18-217ENST00000506784 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
CDK18-217ENST00000506784 PPARGC1BQ86YN6 1023 aaKnown RBP29.93■■■□□ 2.38
CDK18-217ENST00000506784 CSRNP3Q8WYN3 585 aa29.93■■■□□ 2.38
CDK18-217ENST00000506784 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
CDK18-217ENST00000506784 TNIKQ9UKE5 1360 aa29.89■■■□□ 2.38
CDK18-217ENST00000506784 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
CDK18-217ENST00000506784 GOLGA3Q08378 1498 aa29.81■■■□□ 2.36
CDK18-217ENST00000506784 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
CDK18-217ENST00000506784 KIF21BO75037 1637 aa29.74■■■□□ 2.35
CDK18-217ENST00000506784 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
CDK18-217ENST00000506784 CEP164Q9UPV0 1460 aa29.69■■■□□ 2.34
CDK18-217ENST00000506784 UBTFP17480 764 aaKnown RBP29.69■■■□□ 2.34
CDK18-217ENST00000506784 ZEB1P37275 1124 aaPredicted RBP29.68■■■□□ 2.34
CDK18-217ENST00000506784 CFTRP13569 1480 aa29.54■■■□□ 2.32
CDK18-217ENST00000506784 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
CDK18-217ENST00000506784 CUX1P39880 1505 aa29.48■■■□□ 2.31
CDK18-217ENST00000506784 RAPGEF2Q9Y4G8 1499 aa29.46■■■□□ 2.31
CDK18-217ENST00000506784 CLIP1P30622 1438 aa29.39■■■□□ 2.3
CDK18-217ENST00000506784 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
CDK18-217ENST00000506784 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
CDK18-217ENST00000506784 TTBK1Q5TCY1 1321 aaPredicted RBP29.31■■■□□ 2.28
CDK18-217ENST00000506784 PRXQ9BXM0 1461 aa29.3■■■□□ 2.28
CDK18-217ENST00000506784 VPS8Q8N3P4 1428 aa29.26■■■□□ 2.27
CDK18-217ENST00000506784 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
CDK18-217ENST00000506784 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
CDK18-217ENST00000506784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
CDK18-217ENST00000506784 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
CDK18-217ENST00000506784 RANGAP1P46060 587 aaPredicted RBP29.04■■■□□ 2.24
CDK18-217ENST00000506784 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
CDK18-217ENST00000506784 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
CDK18-217ENST00000506784 CUX2O14529 1486 aa28.99■■■□□ 2.23
CDK18-217ENST00000506784 APLP2Q06481 763 aa28.97■■■□□ 2.23
CDK18-217ENST00000506784 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
CDK18-217ENST00000506784 IGF1RP08069 1367 aa28.9■■■□□ 2.22
CDK18-217ENST00000506784 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
CDK18-217ENST00000506784 ARHGAP35Q9NRY4 1499 aa28.82■■■□□ 2.2
CDK18-217ENST00000506784 NESP48681 1621 aa28.81■■■□□ 2.2
CDK18-217ENST00000506784 CARMIL1Q5VZK9 1371 aa28.77■■■□□ 2.2
CDK18-217ENST00000506784 TOPBP1Q92547 1522 aa28.76■■■□□ 2.2
CDK18-217ENST00000506784 HNRNPUL2Q1KMD3 747 aaKnown RBP28.75■■■□□ 2.19
CDK18-217ENST00000506784 LAMC3Q9Y6N6 1575 aa28.74■■■□□ 2.19
CDK18-217ENST00000506784 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
CDK18-217ENST00000506784 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.19
CDK18-217ENST00000506784 RAD54L2Q9Y4B4 1467 aa28.68■■■□□ 2.18
CDK18-217ENST00000506784 KANK4Q5T7N3 995 aaPredicted RBP28.66■■■□□ 2.18
CDK18-217ENST00000506784 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
CDK18-217ENST00000506784 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
CDK18-217ENST00000506784 CUL7Q14999 1698 aa28.57■■■□□ 2.16
CDK18-217ENST00000506784 RRBP1Q9P2E9 1410 aaKnown RBP28.54■■■□□ 2.16
CDK18-217ENST00000506784 MAP3K1Q13233 1512 aa28.51■■■□□ 2.16
CDK18-217ENST00000506784 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
CDK18-217ENST00000506784 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
CDK18-217ENST00000506784 CTTNBP2Q8WZ74 1663 aa28.46■■■□□ 2.15
CDK18-217ENST00000506784 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
CDK18-217ENST00000506784 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
CDK18-217ENST00000506784 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
CDK18-217ENST00000506784 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
CDK18-217ENST00000506784 EFCAB5A4FU69 1503 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms