RNA–Protein interactions for RNA: ENST00000369792.4

ALX3-201, Transcript of ALX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX3, Length 1,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3-201ENST00000369792 NISCHQ9Y2I1 1504 aa46.69■■■■■ 5.06
ALX3-201ENST00000369792 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
ALX3-201ENST00000369792 ZCCHC6Q5VYS8 1495 aaKnown RBP39.26■■■■□ 3.88
ALX3-201ENST00000369792 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.76
ALX3-201ENST00000369792 DCAF1Q9Y4B6 1507 aa38.52■■■■□ 3.76
ALX3-201ENST00000369792 SHROOM4Q9ULL8 1493 aa38.45■■■■□ 3.75
ALX3-201ENST00000369792 ABCC9O60706 1549 aa38.12■■■■□ 3.69
ALX3-201ENST00000369792 MYO15BQ96JP2 1530 aa37.91■■■■□ 3.66
ALX3-201ENST00000369792 NACADO15069 1562 aa37.63■■■■□ 3.61
ALX3-201ENST00000369792 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
ALX3-201ENST00000369792 RB1CC1Q8TDY2 1594 aa37.23■■■■□ 3.55
ALX3-201ENST00000369792 SUPT5HO00267 1087 aaKnown RBP37.15■■■■□ 3.54
ALX3-201ENST00000369792 UNC13AQ9UPW8 1703 aa36.58■■■■□ 3.45
ALX3-201ENST00000369792 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
ALX3-201ENST00000369792 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
ALX3-201ENST00000369792 BICRAQ9NZM4 1560 aa36.21■■■■□ 3.39
ALX3-201ENST00000369792 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
ALX3-201ENST00000369792 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
ALX3-201ENST00000369792 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
ALX3-201ENST00000369792 WIZO95785 1651 aa35.86■■■■□ 3.33
ALX3-201ENST00000369792 SMARCA4P51532 1647 aa35.81■■■■□ 3.32
ALX3-201ENST00000369792 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
ALX3-201ENST00000369792 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
ALX3-201ENST00000369792 PEG3Q9GZU2 1588 aa35.31■■■■□ 3.24
ALX3-201ENST00000369792 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
ALX3-201ENST00000369792 SMARCA2P51531 1590 aa35.14■■■■□ 3.22
ALX3-201ENST00000369792 CCDC88BA6NC98 1476 aa35.14■■■■□ 3.22
ALX3-201ENST00000369792 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
ALX3-201ENST00000369792 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
ALX3-201ENST00000369792 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
ALX3-201ENST00000369792 NCAPD3P42695 1498 aa34.78■■■■□ 3.16
ALX3-201ENST00000369792 HMGXB3Q12766 1538 aa34.7■■■■□ 3.14
ALX3-201ENST00000369792 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
ALX3-201ENST00000369792 CC2D2AQ9P2K1 1620 aa34.46■■■■□ 3.11
ALX3-201ENST00000369792 LOC105371045A0A1W2PR82 267 aa34.46■■■■□ 3.11
ALX3-201ENST00000369792 FAM9AQ8IZU1 332 aaPredicted RBP34.31■■■■□ 3.08
ALX3-201ENST00000369792 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.07
ALX3-201ENST00000369792 CFTRP13569 1480 aa34.1■■■■□ 3.05
ALX3-201ENST00000369792 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
ALX3-201ENST00000369792 SOGA1O94964 1423 aa33.97■■■■□ 3.03
ALX3-201ENST00000369792 CADPSQ9ULU8 1353 aa33.93■■■■□ 3.02
ALX3-201ENST00000369792 PRDM2Q13029 1718 aa33.88■■■■□ 3.01
ALX3-201ENST00000369792 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
ALX3-201ENST00000369792 RUSC2Q8N2Y8 1516 aa33.86■■■■□ 3.01
ALX3-201ENST00000369792 EHMT2Q96KQ7 1210 aa33.86■■■■□ 3.01
ALX3-201ENST00000369792 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
ALX3-201ENST00000369792 EEA1Q15075 1411 aa33.81■■■■□ 3
ALX3-201ENST00000369792 CUX1P39880 1505 aa33.75■■■□□ 2.99
ALX3-201ENST00000369792 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
ALX3-201ENST00000369792 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
ALX3-201ENST00000369792 NESP48681 1621 aa33.6■■■□□ 2.97
ALX3-201ENST00000369792 FANCD2Q9BXW9 1451 aa33.55■■■□□ 2.96
ALX3-201ENST00000369792 LAMC3Q9Y6N6 1575 aa33.49■■■□□ 2.95
ALX3-201ENST00000369792 GOLGA3Q08378 1498 aa33.4■■■□□ 2.94
ALX3-201ENST00000369792 TNIKQ9UKE5 1360 aa33.4■■■□□ 2.94
ALX3-201ENST00000369792 KIF21BO75037 1637 aa33.39■■■□□ 2.94
ALX3-201ENST00000369792 CEP164Q9UPV0 1460 aa33.37■■■□□ 2.93
ALX3-201ENST00000369792 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
ALX3-201ENST00000369792 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
ALX3-201ENST00000369792 KIF27Q86VH2 1401 aa33.28■■■□□ 2.92
ALX3-201ENST00000369792 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
ALX3-201ENST00000369792 CEP162Q5TB80 1403 aa33.25■■■□□ 2.91
ALX3-201ENST00000369792 PDS5BQ9NTI5 1447 aa33.24■■■□□ 2.91
ALX3-201ENST00000369792 TOPBP1Q92547 1522 aa33.24■■■□□ 2.91
ALX3-201ENST00000369792 RAPGEF2Q9Y4G8 1499 aa33.23■■■□□ 2.91
ALX3-201ENST00000369792 PRXQ9BXM0 1461 aa33.18■■■□□ 2.9
ALX3-201ENST00000369792 CUX2O14529 1486 aa33.16■■■□□ 2.9
ALX3-201ENST00000369792 PCGF6Q9BYE7 350 aa33.16■■■□□ 2.9
ALX3-201ENST00000369792 URB2Q14146 1524 aaKnown RBP33.15■■■□□ 2.9
ALX3-201ENST00000369792 KIF21AQ7Z4S6 1674 aa33.13■■■□□ 2.89
ALX3-201ENST00000369792 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
ALX3-201ENST00000369792 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
ALX3-201ENST00000369792 RAD54L2Q9Y4B4 1467 aa33.06■■■□□ 2.88
ALX3-201ENST00000369792 IGF1RP08069 1367 aa33.03■■■□□ 2.88
ALX3-201ENST00000369792 TRIM26Q12899 539 aaPredicted RBP33.01■■■□□ 2.88
ALX3-201ENST00000369792 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
ALX3-201ENST00000369792 CLIP1P30622 1438 aa32.92■■■□□ 2.86
ALX3-201ENST00000369792 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
ALX3-201ENST00000369792 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
ALX3-201ENST00000369792 PPARGC1BQ86YN6 1023 aaKnown RBP32.82■■■□□ 2.85
ALX3-201ENST00000369792 MRC2Q9UBG0 1479 aa32.81■■■□□ 2.84
ALX3-201ENST00000369792 RANGAP1P46060 587 aaPredicted RBP32.76■■■□□ 2.83
ALX3-201ENST00000369792 TARBP1Q13395 1621 aaKnown RBP32.71■■■□□ 2.83
ALX3-201ENST00000369792 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
ALX3-201ENST00000369792 ABCA5Q8WWZ7 1642 aa32.7■■■□□ 2.82
ALX3-201ENST00000369792 VPS8Q8N3P4 1428 aa32.66■■■□□ 2.82
ALX3-201ENST00000369792 GAPVD1Q14C86 1478 aa32.63■■■□□ 2.81
ALX3-201ENST00000369792 WDR62O43379 1518 aa32.62■■■□□ 2.81
ALX3-201ENST00000369792 CUL7Q14999 1698 aa32.62■■■□□ 2.81
ALX3-201ENST00000369792 ARAP1Q96P48 1450 aa32.59■■■□□ 2.81
ALX3-201ENST00000369792 ERCC6Q03468 1493 aa32.57■■■□□ 2.8
ALX3-201ENST00000369792 ARHGAP35Q9NRY4 1499 aa32.52■■■□□ 2.8
ALX3-201ENST00000369792 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
ALX3-201ENST00000369792 TTBK1Q5TCY1 1321 aaPredicted RBP32.46■■■□□ 2.79
ALX3-201ENST00000369792 IFT140Q96RY7 1462 aa32.45■■■□□ 2.79
ALX3-201ENST00000369792 HRCP23327 699 aa32.45■■■□□ 2.79
ALX3-201ENST00000369792 AQRO60306 1485 aaKnown RBP eCLIP32.44■■■□□ 2.78
ALX3-201ENST00000369792 PBRM1Q86U86 1689 aa32.4■■■□□ 2.78
ALX3-201ENST00000369792 ZNF608Q9ULD9 1512 aaPredicted RBP32.37■■■□□ 2.77
ALX3-201ENST00000369792 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms