Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 NEFHP1-201ENST00000412845 2629 ntBASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 AC021242.3-201ENST00000607598 1377 ntBASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV13-2A0A0B4J235 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 AC010980.1-201ENST00000587192 1142 ntBASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV13-2A0A0B4J235 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms