RNA–Protein interactions for RNA: ENST00000380392.3

C2CD4B-201, Transcript of C2 calcium dependent domain containing 4B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2CD4B, Length 1,579 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4B-201ENST00000380392 NISCHQ9Y2I1 1504 aa53.01■■■■■ 6.08
C2CD4B-201ENST00000380392 CCDC180Q9P1Z9 1646 aa47.02■■■■■ 5.12
C2CD4B-201ENST00000380392 ABCC9O60706 1549 aa45.45■■■■■ 4.87
C2CD4B-201ENST00000380392 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
C2CD4B-201ENST00000380392 NACADO15069 1562 aa44.03■■■■■ 4.64
C2CD4B-201ENST00000380392 RB1CC1Q8TDY2 1594 aa43.97■■■■■ 4.63
C2CD4B-201ENST00000380392 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
C2CD4B-201ENST00000380392 DCAF8L2P0C7V8 631 aa43.91■■■■■ 4.62
C2CD4B-201ENST00000380392 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
C2CD4B-201ENST00000380392 UNC13AQ9UPW8 1703 aa43.13■■■■■ 4.49
C2CD4B-201ENST00000380392 SCRIBQ14160 1630 aa42.88■■■■■ 4.45
C2CD4B-201ENST00000380392 BICRAQ9NZM4 1560 aa42.68■■■■■ 4.42
C2CD4B-201ENST00000380392 PABPN1Q86U42 306 aaKnown RBP eCLIP42.48■■■■■ 4.39
C2CD4B-201ENST00000380392 SHROOM4Q9ULL8 1493 aa42.23■■■■■ 4.35
C2CD4B-201ENST00000380392 EIF4G1Q04637 1599 aaKnown RBP41.48■■■■■ 4.23
C2CD4B-201ENST00000380392 DNAJC5BQ9UF47 199 aa41.29■■■■■ 4.2
C2CD4B-201ENST00000380392 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
C2CD4B-201ENST00000380392 CC2D2AQ9P2K1 1620 aa41.2■■■■■ 4.19
C2CD4B-201ENST00000380392 SMARCA4P51532 1647 aa41.08■■■■■ 4.17
C2CD4B-201ENST00000380392 BAZ1AQ9NRL2 1556 aaPredicted RBP41.06■■■■■ 4.16
C2CD4B-201ENST00000380392 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
C2CD4B-201ENST00000380392 PEG3Q9GZU2 1588 aa40.69■■■■■ 4.1
C2CD4B-201ENST00000380392 ATAD2BQ9ULI0 1458 aa40.68■■■■■ 4.1
C2CD4B-201ENST00000380392 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
C2CD4B-201ENST00000380392 NCAPD3P42695 1498 aa40.59■■■■■ 4.09
C2CD4B-201ENST00000380392 RSF1Q96T23 1441 aaPredicted RBP40.52■■■■■ 4.08
C2CD4B-201ENST00000380392 WIZO95785 1651 aa40.49■■■■■ 4.07
C2CD4B-201ENST00000380392 HMGXB3Q12766 1538 aa40.49■■■■■ 4.07
C2CD4B-201ENST00000380392 BAZ1BQ9UIG0 1483 aaKnown RBP40.36■■■■■ 4.05
C2CD4B-201ENST00000380392 TOP2AP11388 1531 aaKnown RBP40.07■■■■■ 4
C2CD4B-201ENST00000380392 SUPT5HO00267 1087 aaKnown RBP39.71■■■■□ 3.95
C2CD4B-201ENST00000380392 CCDC88BA6NC98 1476 aa39.54■■■■□ 3.92
C2CD4B-201ENST00000380392 NESP48681 1621 aa39.49■■■■□ 3.91
C2CD4B-201ENST00000380392 LAMC3Q9Y6N6 1575 aa39.49■■■■□ 3.91
C2CD4B-201ENST00000380392 CADPSQ9ULU8 1353 aa39.39■■■■□ 3.9
C2CD4B-201ENST00000380392 CFTRP13569 1480 aa39.3■■■■□ 3.88
C2CD4B-201ENST00000380392 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
C2CD4B-201ENST00000380392 KIF21AQ7Z4S6 1674 aa39.14■■■■□ 3.86
C2CD4B-201ENST00000380392 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
C2CD4B-201ENST00000380392 ERCC6Q03468 1493 aa39.12■■■■□ 3.85
C2CD4B-201ENST00000380392 FANCD2Q9BXW9 1451 aa38.97■■■■□ 3.83
C2CD4B-201ENST00000380392 CEP164Q9UPV0 1460 aa38.89■■■■□ 3.82
C2CD4B-201ENST00000380392 THOC2Q8NI27 1593 aaKnown RBP38.89■■■■□ 3.82
C2CD4B-201ENST00000380392 MRC2Q9UBG0 1479 aa38.75■■■■□ 3.79
C2CD4B-201ENST00000380392 WDR62O43379 1518 aa38.65■■■■□ 3.78
C2CD4B-201ENST00000380392 URB2Q14146 1524 aaKnown RBP38.59■■■■□ 3.77
C2CD4B-201ENST00000380392 CUX2O14529 1486 aa38.58■■■■□ 3.77
C2CD4B-201ENST00000380392 DNMBPQ6XZF7 1577 aa38.44■■■■□ 3.74
C2CD4B-201ENST00000380392 TOPBP1Q92547 1522 aa38.42■■■■□ 3.74
C2CD4B-201ENST00000380392 ABCC8Q09428 1581 aa38.41■■■■□ 3.74
C2CD4B-201ENST00000380392 CUX1P39880 1505 aa38.31■■■■□ 3.72
C2CD4B-201ENST00000380392 WRNQ14191 1432 aaPredicted RBP eCLIP38.18■■■■□ 3.7
C2CD4B-201ENST00000380392 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
C2CD4B-201ENST00000380392 SYNJ1O43426 1573 aa38.15■■■■□ 3.7
C2CD4B-201ENST00000380392 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
C2CD4B-201ENST00000380392 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
C2CD4B-201ENST00000380392 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
C2CD4B-201ENST00000380392 IFT140Q96RY7 1462 aa38.05■■■■□ 3.68
C2CD4B-201ENST00000380392 TARBP1Q13395 1621 aaKnown RBP38.03■■■■□ 3.68
C2CD4B-201ENST00000380392 RAD54L2Q9Y4B4 1467 aa37.93■■■■□ 3.66
C2CD4B-201ENST00000380392 SOGA1O94964 1423 aa37.91■■■■□ 3.66
C2CD4B-201ENST00000380392 WDR97A6NE52 1622 aa37.89■■■■□ 3.66
C2CD4B-201ENST00000380392 ZNF608Q9ULD9 1512 aaPredicted RBP37.85■■■■□ 3.65
C2CD4B-201ENST00000380392 EIF4G3O43432 1585 aaKnown RBP37.79■■■■□ 3.64
C2CD4B-201ENST00000380392 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
C2CD4B-201ENST00000380392 AQRO60306 1485 aaKnown RBP eCLIP37.66■■■■□ 3.62
C2CD4B-201ENST00000380392 TDRD9Q8NDG6 1382 aaKnown RBP37.64■■■■□ 3.62
C2CD4B-201ENST00000380392 ABCA5Q8WWZ7 1642 aa37.63■■■■□ 3.62
C2CD4B-201ENST00000380392 PBRM1Q86U86 1689 aa37.54■■■■□ 3.6
C2CD4B-201ENST00000380392 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.6
C2CD4B-201ENST00000380392 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
C2CD4B-201ENST00000380392 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
C2CD4B-201ENST00000380392 SNAPC4Q5SXM2 1469 aa37.36■■■■□ 3.57
C2CD4B-201ENST00000380392 CHIC1Q5VXU3 224 aa37.35■■■■□ 3.57
C2CD4B-201ENST00000380392 MAGI1Q96QZ7 1491 aaPredicted RBP37.33■■■■□ 3.57
C2CD4B-201ENST00000380392 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
C2CD4B-201ENST00000380392 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.56
C2CD4B-201ENST00000380392 CHD1O14646 1710 aa37.26■■■■□ 3.56
C2CD4B-201ENST00000380392 ADAMTS12P58397 1594 aa37.22■■■■□ 3.55
C2CD4B-201ENST00000380392 RUSC2Q8N2Y8 1516 aa37.18■■■■□ 3.54
C2CD4B-201ENST00000380392 SYNJ2O15056 1496 aa37.17■■■■□ 3.54
C2CD4B-201ENST00000380392 IGF1RP08069 1367 aa37.11■■■■□ 3.53
C2CD4B-201ENST00000380392 CUL7Q14999 1698 aa37.11■■■■□ 3.53
C2CD4B-201ENST00000380392 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
C2CD4B-201ENST00000380392 FBLN2P98095 1184 aa37.02■■■■□ 3.52
C2CD4B-201ENST00000380392 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
C2CD4B-201ENST00000380392 GRIN2AQ12879 1464 aa37■■■■□ 3.51
C2CD4B-201ENST00000380392 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
C2CD4B-201ENST00000380392 EEA1Q15075 1411 aa36.92■■■■□ 3.5
C2CD4B-201ENST00000380392 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
C2CD4B-201ENST00000380392 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
C2CD4B-201ENST00000380392 CLASP1Q7Z460 1538 aa36.83■■■■□ 3.49
C2CD4B-201ENST00000380392 NUP160Q12769 1436 aa36.82■■■■□ 3.48
C2CD4B-201ENST00000380392 DNAJC5Q9H3Z4 198 aa36.8■■■■□ 3.48
C2CD4B-201ENST00000380392 PRXQ9BXM0 1461 aa36.77■■■■□ 3.48
C2CD4B-201ENST00000380392 RAPGEF2Q9Y4G8 1499 aa36.76■■■■□ 3.47
C2CD4B-201ENST00000380392 CSRNP3Q8WYN3 585 aa36.74■■■■□ 3.47
C2CD4B-201ENST00000380392 FAM9AQ8IZU1 332 aaPredicted RBP36.69■■■■□ 3.46
C2CD4B-201ENST00000380392 KIF21BO75037 1637 aa36.59■■■■□ 3.45
C2CD4B-201ENST00000380392 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms