RNA–Protein interactions for RNA: ENST00000292616.9

LRWD1-201, Transcript of leucine rich repeats and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRWD1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRWD1-201ENST00000292616 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
LRWD1-201ENST00000292616 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
LRWD1-201ENST00000292616 ZCCHC6Q5VYS8 1495 aaKnown RBP35.44■■■■□ 3.26
LRWD1-201ENST00000292616 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
LRWD1-201ENST00000292616 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
LRWD1-201ENST00000292616 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
LRWD1-201ENST00000292616 ABCC9O60706 1549 aa34.32■■■■□ 3.08
LRWD1-201ENST00000292616 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
LRWD1-201ENST00000292616 NACADO15069 1562 aa33.87■■■■□ 3.01
LRWD1-201ENST00000292616 SCRIBQ14160 1630 aa33.7■■■□□ 2.99
LRWD1-201ENST00000292616 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
LRWD1-201ENST00000292616 RB1CC1Q8TDY2 1594 aa33.49■■■□□ 2.95
LRWD1-201ENST00000292616 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
LRWD1-201ENST00000292616 RSF1Q96T23 1441 aaPredicted RBP32.87■■■□□ 2.85
LRWD1-201ENST00000292616 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
LRWD1-201ENST00000292616 MROH2BQ7Z745 1585 aa32.6■■■□□ 2.81
LRWD1-201ENST00000292616 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
LRWD1-201ENST00000292616 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
LRWD1-201ENST00000292616 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.79
LRWD1-201ENST00000292616 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
LRWD1-201ENST00000292616 WIZO95785 1651 aa32.37■■■□□ 2.77
LRWD1-201ENST00000292616 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
LRWD1-201ENST00000292616 TOP2AP11388 1531 aaKnown RBP31.96■■■□□ 2.71
LRWD1-201ENST00000292616 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.68
LRWD1-201ENST00000292616 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
LRWD1-201ENST00000292616 SMARCA2P51531 1590 aa31.71■■■□□ 2.67
LRWD1-201ENST00000292616 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
LRWD1-201ENST00000292616 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
LRWD1-201ENST00000292616 EIF4G1Q04637 1599 aaKnown RBP31.59■■■□□ 2.65
LRWD1-201ENST00000292616 BAZ1BQ9UIG0 1483 aaKnown RBP31.5■■■□□ 2.63
LRWD1-201ENST00000292616 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
LRWD1-201ENST00000292616 LOC105371045A0A1W2PR82 267 aa31.28■■■□□ 2.6
LRWD1-201ENST00000292616 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
LRWD1-201ENST00000292616 ABCC8Q09428 1581 aa31.21■■■□□ 2.59
LRWD1-201ENST00000292616 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
LRWD1-201ENST00000292616 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.56
LRWD1-201ENST00000292616 WRNQ14191 1432 aaPredicted RBP eCLIP30.91■■■□□ 2.54
LRWD1-201ENST00000292616 HRCP23327 699 aa30.88■■■□□ 2.53
LRWD1-201ENST00000292616 PCGF6Q9BYE7 350 aa30.8■■■□□ 2.52
LRWD1-201ENST00000292616 SYNJ1O43426 1573 aa30.78■■■□□ 2.52
LRWD1-201ENST00000292616 CFTRP13569 1480 aa30.73■■■□□ 2.51
LRWD1-201ENST00000292616 EHMT2Q96KQ7 1210 aa30.73■■■□□ 2.51
LRWD1-201ENST00000292616 SOGA1O94964 1423 aa30.72■■■□□ 2.51
LRWD1-201ENST00000292616 DNAJC5BQ9UF47 199 aa30.69■■■□□ 2.5
LRWD1-201ENST00000292616 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
LRWD1-201ENST00000292616 EEA1Q15075 1411 aa30.6■■■□□ 2.49
LRWD1-201ENST00000292616 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
LRWD1-201ENST00000292616 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
LRWD1-201ENST00000292616 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
LRWD1-201ENST00000292616 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
LRWD1-201ENST00000292616 CSRNP3Q8WYN3 585 aa30.51■■■□□ 2.48
LRWD1-201ENST00000292616 CUX1P39880 1505 aa30.44■■■□□ 2.46
LRWD1-201ENST00000292616 TRIM26Q12899 539 aaPredicted RBP30.42■■■□□ 2.46
LRWD1-201ENST00000292616 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
LRWD1-201ENST00000292616 GOLGA3Q08378 1498 aa30.26■■■□□ 2.43
LRWD1-201ENST00000292616 NESP48681 1621 aa30.23■■■□□ 2.43
LRWD1-201ENST00000292616 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
LRWD1-201ENST00000292616 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
LRWD1-201ENST00000292616 KIF21BO75037 1637 aa30.21■■■□□ 2.43
LRWD1-201ENST00000292616 UBTFP17480 764 aaKnown RBP30.2■■■□□ 2.42
LRWD1-201ENST00000292616 CEP162Q5TB80 1403 aa30.15■■■□□ 2.42
LRWD1-201ENST00000292616 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
LRWD1-201ENST00000292616 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
LRWD1-201ENST00000292616 RAPGEF2Q9Y4G8 1499 aa30.06■■■□□ 2.4
LRWD1-201ENST00000292616 PPARGC1BQ86YN6 1023 aaKnown RBP30.04■■■□□ 2.4
LRWD1-201ENST00000292616 FGD5Q6ZNL6 1462 aa30.04■■■□□ 2.4
LRWD1-201ENST00000292616 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
LRWD1-201ENST00000292616 PRXQ9BXM0 1461 aa29.98■■■□□ 2.39
LRWD1-201ENST00000292616 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
LRWD1-201ENST00000292616 CUX2O14529 1486 aa29.93■■■□□ 2.38
LRWD1-201ENST00000292616 ERICH3Q5RHP9 1530 aa29.92■■■□□ 2.38
LRWD1-201ENST00000292616 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
LRWD1-201ENST00000292616 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
LRWD1-201ENST00000292616 URB2Q14146 1524 aaKnown RBP29.84■■■□□ 2.37
LRWD1-201ENST00000292616 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
LRWD1-201ENST00000292616 CLIP1P30622 1438 aa29.82■■■□□ 2.36
LRWD1-201ENST00000292616 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
LRWD1-201ENST00000292616 IGF1RP08069 1367 aa29.81■■■□□ 2.36
LRWD1-201ENST00000292616 RAD54L2Q9Y4B4 1467 aa29.79■■■□□ 2.36
LRWD1-201ENST00000292616 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
LRWD1-201ENST00000292616 RANGAP1P46060 587 aaPredicted RBP29.68■■■□□ 2.34
LRWD1-201ENST00000292616 CARMIL1Q5VZK9 1371 aa29.66■■■□□ 2.34
LRWD1-201ENST00000292616 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
LRWD1-201ENST00000292616 VPS8Q8N3P4 1428 aa29.59■■■□□ 2.33
LRWD1-201ENST00000292616 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
LRWD1-201ENST00000292616 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
LRWD1-201ENST00000292616 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
LRWD1-201ENST00000292616 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
LRWD1-201ENST00000292616 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
LRWD1-201ENST00000292616 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
LRWD1-201ENST00000292616 CUL7Q14999 1698 aa29.45■■■□□ 2.31
LRWD1-201ENST00000292616 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.3
LRWD1-201ENST00000292616 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
LRWD1-201ENST00000292616 ARHGAP35Q9NRY4 1499 aa29.4■■■□□ 2.3
LRWD1-201ENST00000292616 APLP2Q06481 763 aa29.35■■■□□ 2.29
LRWD1-201ENST00000292616 WDR62O43379 1518 aa29.33■■■□□ 2.29
LRWD1-201ENST00000292616 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
LRWD1-201ENST00000292616 AQRO60306 1485 aaKnown RBP eCLIP29.21■■■□□ 2.275e-6■■■■■ 28
LRWD1-201ENST00000292616 CTTNBP2Q8WZ74 1663 aa29.21■■■□□ 2.27
LRWD1-201ENST00000292616 IFT140Q96RY7 1462 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms