RNA–Protein interactions for RNA: ENST00000376286.8

PCCA-203, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-203ENST00000376286 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
PCCA-203ENST00000376286 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
PCCA-203ENST00000376286 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
PCCA-203ENST00000376286 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
PCCA-203ENST00000376286 HRCP23327 699 aa31.07■■■□□ 2.56
PCCA-203ENST00000376286 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
PCCA-203ENST00000376286 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
PCCA-203ENST00000376286 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
PCCA-203ENST00000376286 PCGF6Q9BYE7 350 aa30.67■■■□□ 2.5
PCCA-203ENST00000376286 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
PCCA-203ENST00000376286 PPARGC1BQ86YN6 1023 aaKnown RBP30.34■■■□□ 2.45
PCCA-203ENST00000376286 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
PCCA-203ENST00000376286 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
PCCA-203ENST00000376286 TRIM26Q12899 539 aaPredicted RBP29.92■■■□□ 2.38
PCCA-203ENST00000376286 ABCC9O60706 1549 aa29.61■■■□□ 2.33
PCCA-203ENST00000376286 ZEB1P37275 1124 aaPredicted RBP29.53■■■□□ 2.32
PCCA-203ENST00000376286 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
PCCA-203ENST00000376286 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
PCCA-203ENST00000376286 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
PCCA-203ENST00000376286 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
PCCA-203ENST00000376286 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
PCCA-203ENST00000376286 PELP1Q8IZL8 1130 aaKnown RBP29.14■■■□□ 2.26
PCCA-203ENST00000376286 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
PCCA-203ENST00000376286 EHMT2Q96KQ7 1210 aa28.97■■■□□ 2.23
PCCA-203ENST00000376286 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
PCCA-203ENST00000376286 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
PCCA-203ENST00000376286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.63■■■□□ 2.17
PCCA-203ENST00000376286 CCER1Q8TC90 406 aaPredicted RBP28.6■■■□□ 2.17
PCCA-203ENST00000376286 WIZO95785 1651 aa28.54■■■□□ 2.16
PCCA-203ENST00000376286 ACIN1Q9UKV3 1341 aaKnown RBP28.53■■■□□ 2.16
PCCA-203ENST00000376286 NACADO15069 1562 aa28.51■■■□□ 2.15
PCCA-203ENST00000376286 NEUROD1Q13562 356 aa28.44■■■□□ 2.14
PCCA-203ENST00000376286 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
PCCA-203ENST00000376286 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.13
PCCA-203ENST00000376286 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
PCCA-203ENST00000376286 CENPBP07199 599 aaPredicted RBP28.29■■■□□ 2.12
PCCA-203ENST00000376286 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
PCCA-203ENST00000376286 GTF3C3Q9Y5Q9 886 aa28.23■■■□□ 2.11
PCCA-203ENST00000376286 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.1
PCCA-203ENST00000376286 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
PCCA-203ENST00000376286 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
PCCA-203ENST00000376286 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
PCCA-203ENST00000376286 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
PCCA-203ENST00000376286 TNIKQ9UKE5 1360 aa28.08■■■□□ 2.09
PCCA-203ENST00000376286 SOGA1O94964 1423 aa28.03■■■□□ 2.08
PCCA-203ENST00000376286 ZNF316A6NFI3 1004 aaPredicted RBP27.99■■■□□ 2.07
PCCA-203ENST00000376286 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
PCCA-203ENST00000376286 EEA1Q15075 1411 aa27.95■■■□□ 2.06
PCCA-203ENST00000376286 CSRNP3Q8WYN3 585 aa27.93■■■□□ 2.06
PCCA-203ENST00000376286 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
PCCA-203ENST00000376286 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
PCCA-203ENST00000376286 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
PCCA-203ENST00000376286 MYT1Q01538 1121 aa27.84■■■□□ 2.05
PCCA-203ENST00000376286 GOLGA3Q08378 1498 aa27.81■■■□□ 2.04
PCCA-203ENST00000376286 YTHDC1Q96MU7 727 aaKnown RBP27.76■■■□□ 2.03
PCCA-203ENST00000376286 MIER1Q8N108 512 aa27.67■■■□□ 2.02
PCCA-203ENST00000376286 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
PCCA-203ENST00000376286 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
PCCA-203ENST00000376286 CLIP1P30622 1438 aa27.54■■■□□ 2
PCCA-203ENST00000376286 KIF21BO75037 1637 aa27.51■■■□□ 2
PCCA-203ENST00000376286 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
PCCA-203ENST00000376286 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
PCCA-203ENST00000376286 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
PCCA-203ENST00000376286 APLP2Q06481 763 aa27.43■■□□□ 1.98
PCCA-203ENST00000376286 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
PCCA-203ENST00000376286 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
PCCA-203ENST00000376286 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
PCCA-203ENST00000376286 CLSPNQ9HAW4 1339 aa27.23■■□□□ 1.95
PCCA-203ENST00000376286 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
PCCA-203ENST00000376286 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
PCCA-203ENST00000376286 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
PCCA-203ENST00000376286 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
PCCA-203ENST00000376286 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
PCCA-203ENST00000376286 SUPT16HQ9Y5B9 1047 aaKnown RBP27.05■■□□□ 1.92
PCCA-203ENST00000376286 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
PCCA-203ENST00000376286 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
PCCA-203ENST00000376286 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
PCCA-203ENST00000376286 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
PCCA-203ENST00000376286 PRXQ9BXM0 1461 aa26.95■■□□□ 1.9
PCCA-203ENST00000376286 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
PCCA-203ENST00000376286 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
PCCA-203ENST00000376286 CUX2O14529 1486 aa26.85■■□□□ 1.89
PCCA-203ENST00000376286 CCNB3Q8WWL7 1395 aa26.8■■□□□ 1.88
PCCA-203ENST00000376286 TSHZ2Q9NRE2 1034 aa26.76■■□□□ 1.87
PCCA-203ENST00000376286 ITGAEP38570 1179 aa26.71■■□□□ 1.87
PCCA-203ENST00000376286 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
PCCA-203ENST00000376286 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
PCCA-203ENST00000376286 KCNH8Q96L42 1107 aa26.65■■□□□ 1.86
PCCA-203ENST00000376286 CUX1P39880 1505 aa26.64■■□□□ 1.86
PCCA-203ENST00000376286 RAB3GAP2Q9H2M9 1393 aa26.64■■□□□ 1.86
PCCA-203ENST00000376286 MAPKBP1O60336 1514 aa26.61■■□□□ 1.85
PCCA-203ENST00000376286 ANP32EQ9BTT0 268 aa26.55■■□□□ 1.84
PCCA-203ENST00000376286 SETD5Q9C0A6 1442 aa26.5■■□□□ 1.83
PCCA-203ENST00000376286 BCANQ96GW7 911 aa26.48■■□□□ 1.83
PCCA-203ENST00000376286 DDX10Q13206 875 aaKnown RBP26.48■■□□□ 1.83
PCCA-203ENST00000376286 TIAM1Q13009 1591 aa26.47■■□□□ 1.83
PCCA-203ENST00000376286 MAP3K1Q13233 1512 aa26.46■■□□□ 1.83
PCCA-203ENST00000376286 FKBP8Q14318 412 aa26.45■■□□□ 1.82
PCCA-203ENST00000376286 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
PCCA-203ENST00000376286 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms