Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV13-2A0A0B4J235 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TRAV13-2A0A0B4J235 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.02■■□□□ 1.12
TRAV13-2A0A0B4J235 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV13-2A0A0B4J235 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV13-2A0A0B4J235 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRAV13-2A0A0B4J235 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV13-2A0A0B4J235 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV13-2A0A0B4J235 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.29■■□□□ 1
TRAV13-2A0A0B4J235 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV13-2A0A0B4J235 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.17■□□□□ 0.98
TRAV13-2A0A0B4J235 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.15■□□□□ 0.98
TRAV13-2A0A0B4J235 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV13-2A0A0B4J235 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV13-2A0A0B4J235 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAV13-2A0A0B4J235 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TRAV13-2A0A0B4J235 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRAV13-2A0A0B4J235 AL356512.1-201ENST00000607453 1739 ntBASIC20.81■□□□□ 0.92
TRAV13-2A0A0B4J235 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRAV13-2A0A0B4J235 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV13-2A0A0B4J235 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV13-2A0A0B4J235 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRAV13-2A0A0B4J235 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV13-2A0A0B4J235 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV13-2A0A0B4J235 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV13-2A0A0B4J235 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV13-2A0A0B4J235 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
TRAV13-2A0A0B4J235 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV13-2A0A0B4J235 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV13-2A0A0B4J235 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV13-2A0A0B4J235 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV13-2A0A0B4J235 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV13-2A0A0B4J235 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV13-2A0A0B4J235 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAV13-2A0A0B4J235 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV13-2A0A0B4J235 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV13-2A0A0B4J235 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV13-2A0A0B4J235 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV13-2A0A0B4J235 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV13-2A0A0B4J235 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV13-2A0A0B4J235 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV13-2A0A0B4J235 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV13-2A0A0B4J235 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV13-2A0A0B4J235 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV13-2A0A0B4J235 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV13-2A0A0B4J235 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV13-2A0A0B4J235 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV13-2A0A0B4J235 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV13-2A0A0B4J235 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV13-2A0A0B4J235 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV13-2A0A0B4J235 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV13-2A0A0B4J235 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRAV13-2A0A0B4J235 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV13-2A0A0B4J235 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV13-2A0A0B4J235 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV13-2A0A0B4J235 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRAV13-2A0A0B4J235 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV13-2A0A0B4J235 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TRAV13-2A0A0B4J235 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV13-2A0A0B4J235 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV13-2A0A0B4J235 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV13-2A0A0B4J235 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV13-2A0A0B4J235 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAV13-2A0A0B4J235 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV13-2A0A0B4J235 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV13-2A0A0B4J235 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV13-2A0A0B4J235 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV13-2A0A0B4J235 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TRAV13-2A0A0B4J235 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV13-2A0A0B4J235 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAV13-2A0A0B4J235 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV13-2A0A0B4J235 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV13-2A0A0B4J235 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV13-2A0A0B4J235 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV13-2A0A0B4J235 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV13-2A0A0B4J235 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV13-2A0A0B4J235 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV13-2A0A0B4J235 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAV13-2A0A0B4J235 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV13-2A0A0B4J235 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV13-2A0A0B4J235 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV13-2A0A0B4J235 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV13-2A0A0B4J235 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV13-2A0A0B4J235 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV13-2A0A0B4J235 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV13-2A0A0B4J235 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV13-2A0A0B4J235 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV13-2A0A0B4J235 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV13-2A0A0B4J235 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV13-2A0A0B4J235 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV13-2A0A0B4J235 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAV13-2A0A0B4J235 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV13-2A0A0B4J235 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV13-2A0A0B4J235 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV13-2A0A0B4J235 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAV13-2A0A0B4J235 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV13-2A0A0B4J235 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV13-2A0A0B4J235 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV13-2A0A0B4J235 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV13-2A0A0B4J235 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms