Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHS1P30084 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHS1P30084 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHS1P30084 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ECHS1P30084 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHS1P30084 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.65■□□□□ 0.9
ECHS1P30084 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ECHS1P30084 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.65■□□□□ 0.9
ECHS1P30084 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ECHS1P30084 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.65■□□□□ 0.9
ECHS1P30084 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.65■□□□□ 0.9
ECHS1P30084 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ECHS1P30084 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
ECHS1P30084 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ECHS1P30084 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ECHS1P30084 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ECHS1P30084 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ECHS1P30084 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.64■□□□□ 0.89
ECHS1P30084 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
ECHS1P30084 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.64■□□□□ 0.89
ECHS1P30084 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
ECHS1P30084 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ECHS1P30084 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ECHS1P30084 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ECHS1P30084 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ECHS1P30084 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.64■□□□□ 0.89
ECHS1P30084 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.64■□□□□ 0.89
ECHS1P30084 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ECHS1P30084 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
ECHS1P30084 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHS1P30084 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ECHS1P30084 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 AC010141.2-201ENST00000452426 721 ntBASIC20.63■□□□□ 0.89
ECHS1P30084 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.63■□□□□ 0.89
ECHS1P30084 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHS1P30084 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.63■□□□□ 0.89
ECHS1P30084 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.63■□□□□ 0.89
ECHS1P30084 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.63■□□□□ 0.89
ECHS1P30084 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHS1P30084 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHS1P30084 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ECHS1P30084 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHS1P30084 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.62■□□□□ 0.89
ECHS1P30084 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.62■□□□□ 0.89
ECHS1P30084 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHS1P30084 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.62■□□□□ 0.89
ECHS1P30084 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ECHS1P30084 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ECHS1P30084 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ECHS1P30084 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.61■□□□□ 0.89
ECHS1P30084 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.61■□□□□ 0.89
ECHS1P30084 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 AC091799.1-201ENST00000422823 811 ntBASIC20.61■□□□□ 0.89
ECHS1P30084 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.61■□□□□ 0.89
ECHS1P30084 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.61■□□□□ 0.89
ECHS1P30084 AC079140.4-201ENST00000507448 529 ntBASIC20.61■□□□□ 0.89
ECHS1P30084 SLC7A5P2-201ENST00000553010 536 ntBASIC20.61■□□□□ 0.89
ECHS1P30084 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
ECHS1P30084 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHS1P30084 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms