RNA–Protein interactions for RNA: ENST00000611745.1

SRRM3-204, Transcript of serine/arginine repetitive matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRRM3, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-204ENST00000611745 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
SRRM3-204ENST00000611745 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
SRRM3-204ENST00000611745 PCGF6Q9BYE7 350 aa31.98■■■□□ 2.71
SRRM3-204ENST00000611745 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
SRRM3-204ENST00000611745 HRCP23327 699 aa31.92■■■□□ 2.7
SRRM3-204ENST00000611745 PPARGC1BQ86YN6 1023 aaKnown RBP31.86■■■□□ 2.69
SRRM3-204ENST00000611745 PELP1Q8IZL8 1130 aaKnown RBP31.13■■■□□ 2.57
SRRM3-204ENST00000611745 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
SRRM3-204ENST00000611745 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.5
SRRM3-204ENST00000611745 LOC105371045A0A1W2PR82 267 aa30.61■■■□□ 2.49
SRRM3-204ENST00000611745 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
SRRM3-204ENST00000611745 SCAF1Q9H7N4 1312 aaKnown RBP30.41■■■□□ 2.46
SRRM3-204ENST00000611745 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
SRRM3-204ENST00000611745 TRIM26Q12899 539 aaPredicted RBP30.29■■■□□ 2.44
SRRM3-204ENST00000611745 ZEB1P37275 1124 aaPredicted RBP30.09■■■□□ 2.41
SRRM3-204ENST00000611745 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
SRRM3-204ENST00000611745 MYT1Q01538 1121 aa29.93■■■□□ 2.38
SRRM3-204ENST00000611745 GTF3C3Q9Y5Q9 886 aa29.84■■■□□ 2.37
SRRM3-204ENST00000611745 CENPBP07199 599 aaPredicted RBP29.77■■■□□ 2.36
SRRM3-204ENST00000611745 YTHDC1Q96MU7 727 aaKnown RBP29.72■■■□□ 2.35
SRRM3-204ENST00000611745 NEUROD1Q13562 356 aa29.71■■■□□ 2.35
SRRM3-204ENST00000611745 TTBK1Q5TCY1 1321 aaPredicted RBP29.69■■■□□ 2.34
SRRM3-204ENST00000611745 ACIN1Q9UKV3 1341 aaKnown RBP29.68■■■□□ 2.34
SRRM3-204ENST00000611745 CCER1Q8TC90 406 aaPredicted RBP29.66■■■□□ 2.34
SRRM3-204ENST00000611745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
SRRM3-204ENST00000611745 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
SRRM3-204ENST00000611745 DIEXFQ68CQ4 756 aaKnown RBP29.4■■■□□ 2.3
SRRM3-204ENST00000611745 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
SRRM3-204ENST00000611745 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
SRRM3-204ENST00000611745 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
SRRM3-204ENST00000611745 ZNF316A6NFI3 1004 aaPredicted RBP28.56■■■□□ 2.16
SRRM3-204ENST00000611745 MIER1Q8N108 512 aa28.52■■■□□ 2.16
SRRM3-204ENST00000611745 HNRNPUL2Q1KMD3 747 aaKnown RBP28.43■■■□□ 2.14
SRRM3-204ENST00000611745 BCANQ96GW7 911 aa28.35■■■□□ 2.13
SRRM3-204ENST00000611745 BCL11AQ9H165 835 aa28.29■■■□□ 2.12
SRRM3-204ENST00000611745 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
SRRM3-204ENST00000611745 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
SRRM3-204ENST00000611745 ANP32EQ9BTT0 268 aa28.1■■■□□ 2.09
SRRM3-204ENST00000611745 SUPT16HQ9Y5B9 1047 aaKnown RBP27.98■■■□□ 2.07
SRRM3-204ENST00000611745 APLP2Q06481 763 aa27.97■■■□□ 2.07
SRRM3-204ENST00000611745 CSRNP3Q8WYN3 585 aa27.96■■■□□ 2.07
SRRM3-204ENST00000611745 ERICH6Q7L0X2 663 aa27.93■■■□□ 2.06
SRRM3-204ENST00000611745 TSHZ2Q9NRE2 1034 aa27.86■■■□□ 2.05
SRRM3-204ENST00000611745 NEFLP07196 543 aa27.8■■■□□ 2.04
SRRM3-204ENST00000611745 FKBP8Q14318 412 aa27.74■■■□□ 2.03
SRRM3-204ENST00000611745 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
SRRM3-204ENST00000611745 ITGAEP38570 1179 aa27.68■■■□□ 2.02
SRRM3-204ENST00000611745 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
SRRM3-204ENST00000611745 RB1CC1Q8TDY2 1594 aa27.44■■□□□ 1.98
SRRM3-204ENST00000611745 CLSPNQ9HAW4 1339 aa27.44■■□□□ 1.98
SRRM3-204ENST00000611745 KCNH8Q96L42 1107 aa27.41■■□□□ 1.98
SRRM3-204ENST00000611745 TRIM52Q96A61 297 aa27.39■■□□□ 1.98
SRRM3-204ENST00000611745 RBM19Q9Y4C8 960 aaKnown RBP27.38■■□□□ 1.97
SRRM3-204ENST00000611745 CEP162Q5TB80 1403 aa27.34■■□□□ 1.97
SRRM3-204ENST00000611745 DDX10Q13206 875 aaKnown RBP27.28■■□□□ 1.96
SRRM3-204ENST00000611745 IRX6P78412 446 aaPredicted RBP27.26■■□□□ 1.95
SRRM3-204ENST00000611745 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.94
SRRM3-204ENST00000611745 ABCC9O60706 1549 aa27.15■■□□□ 1.94
SRRM3-204ENST00000611745 CDK11AQ9UQ88 783 aaPredicted RBP27.13■■□□□ 1.93
SRRM3-204ENST00000611745 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
SRRM3-204ENST00000611745 NBR1Q14596 966 aa27.11■■□□□ 1.93
SRRM3-204ENST00000611745 PRKCSHP14314 528 aaPredicted RBP27■■□□□ 1.91
SRRM3-204ENST00000611745 SOGA1O94964 1423 aa27■■□□□ 1.91
SRRM3-204ENST00000611745 ANP32CO43423 234 aa26.95■■□□□ 1.9
SRRM3-204ENST00000611745 CNGB1Q14028 1251 aaPredicted RBP26.94■■□□□ 1.9
SRRM3-204ENST00000611745 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
SRRM3-204ENST00000611745 ATP1B4Q9UN42 357 aaPredicted RBP26.91■■□□□ 1.9
SRRM3-204ENST00000611745 DEKP35659 375 aaKnown RBP26.9■■□□□ 1.9
SRRM3-204ENST00000611745 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.9
SRRM3-204ENST00000611745 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
SRRM3-204ENST00000611745 MSH5O43196 834 aa26.85■■□□□ 1.89
SRRM3-204ENST00000611745 HNRNPUQ00839 825 aaKnown RBP eCLIP26.85■■□□□ 1.89
SRRM3-204ENST00000611745 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
SRRM3-204ENST00000611745 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
SRRM3-204ENST00000611745 RTN4Q9NQC3 1192 aaKnown RBP26.83■■□□□ 1.88
SRRM3-204ENST00000611745 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
SRRM3-204ENST00000611745 CLIP1P30622 1438 aa26.74■■□□□ 1.87
SRRM3-204ENST00000611745 RUSC2Q8N2Y8 1516 aa26.74■■□□□ 1.87
SRRM3-204ENST00000611745 ANO8Q9HCE9 1232 aaPredicted RBP26.7■■□□□ 1.87
SRRM3-204ENST00000611745 FAM50AQ14320 339 aaKnown RBP26.68■■□□□ 1.86
SRRM3-204ENST00000611745 SIN3AQ96ST3 1273 aa26.68■■□□□ 1.86
SRRM3-204ENST00000611745 CCDC136Q96JN2 1154 aa26.67■■□□□ 1.86
SRRM3-204ENST00000611745 WIZO95785 1651 aa26.64■■□□□ 1.86
SRRM3-204ENST00000611745 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
SRRM3-204ENST00000611745 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
SRRM3-204ENST00000611745 B4GALNT3Q6L9W6 998 aa26.6■■□□□ 1.85
SRRM3-204ENST00000611745 GOLGA3Q08378 1498 aa26.58■■□□□ 1.85
SRRM3-204ENST00000611745 SENP3-EIF4A1A0A087X0R7 540 aa26.56■■□□□ 1.84
SRRM3-204ENST00000611745 EIF5BO60841 1220 aaKnown RBP26.56■■□□□ 1.84
SRRM3-204ENST00000611745 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.55■■□□□ 1.84
SRRM3-204ENST00000611745 KANK4Q5T7N3 995 aaPredicted RBP26.55■■□□□ 1.84
SRRM3-204ENST00000611745 NPM2Q86SE8 214 aaKnown RBP26.55■■□□□ 1.84
SRRM3-204ENST00000611745 FAM9BQ8IZU0 186 aa26.5■■□□□ 1.83
SRRM3-204ENST00000611745 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
SRRM3-204ENST00000611745 POLR3GLQ9BT43 218 aa26.45■■□□□ 1.83
SRRM3-204ENST00000611745 NOP58Q9Y2X3 529 aaKnown RBP26.45■■□□□ 1.82
SRRM3-204ENST00000611745 ANP32AP39687 249 aaKnown RBP26.44■■□□□ 1.82
SRRM3-204ENST00000611745 SALL2Q9Y467 1007 aaPredicted RBP26.42■■□□□ 1.82
SRRM3-204ENST00000611745 FANCIQ9NVI1 1328 aa26.42■■□□□ 1.82
SRRM3-204ENST00000611745 ZBTB47Q9UFB7 747 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms