RNA–Protein interactions for RNA: ENST00000334983.9

CMTM7-201, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM7, Length 2,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-201ENST00000334983 NISCHQ9Y2I1 1504 aa41.2■■■■■ 4.19
CMTM7-201ENST00000334983 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
CMTM7-201ENST00000334983 ABCC9O60706 1549 aa35.16■■■■□ 3.22
CMTM7-201ENST00000334983 ZCCHC6Q5VYS8 1495 aaKnown RBP34.42■■■■□ 3.1
CMTM7-201ENST00000334983 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
CMTM7-201ENST00000334983 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
CMTM7-201ENST00000334983 NACADO15069 1562 aa34.05■■■■□ 3.04
CMTM7-201ENST00000334983 MYO15BQ96JP2 1530 aa34.01■■■■□ 3.03
CMTM7-201ENST00000334983 RB1CC1Q8TDY2 1594 aa33.96■■■■□ 3.03
CMTM7-201ENST00000334983 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
CMTM7-201ENST00000334983 SCRIBQ14160 1630 aa33.26■■■□□ 2.92
CMTM7-201ENST00000334983 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
CMTM7-201ENST00000334983 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.88
CMTM7-201ENST00000334983 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
CMTM7-201ENST00000334983 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
CMTM7-201ENST00000334983 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
CMTM7-201ENST00000334983 CECR2Q9BXF3 1484 aa32.09■■■□□ 2.73
CMTM7-201ENST00000334983 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
CMTM7-201ENST00000334983 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
CMTM7-201ENST00000334983 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
CMTM7-201ENST00000334983 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
CMTM7-201ENST00000334983 MROH2BQ7Z745 1585 aa31.79■■■□□ 2.68
CMTM7-201ENST00000334983 CC2D2AQ9P2K1 1620 aa31.79■■■□□ 2.68
CMTM7-201ENST00000334983 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
CMTM7-201ENST00000334983 ATAD2BQ9ULI0 1458 aa31.57■■■□□ 2.64
CMTM7-201ENST00000334983 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
CMTM7-201ENST00000334983 PEG3Q9GZU2 1588 aa31.5■■■□□ 2.63
CMTM7-201ENST00000334983 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
CMTM7-201ENST00000334983 WIZO95785 1651 aa31.45■■■□□ 2.63
CMTM7-201ENST00000334983 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
CMTM7-201ENST00000334983 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
CMTM7-201ENST00000334983 TOP2AP11388 1531 aaKnown RBP31.12■■■□□ 2.57
CMTM7-201ENST00000334983 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.55
CMTM7-201ENST00000334983 TRIM41Q8WV44 630 aa30.97■■■□□ 2.55
CMTM7-201ENST00000334983 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
CMTM7-201ENST00000334983 HRCP23327 699 aa30.8■■■□□ 2.52
CMTM7-201ENST00000334983 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
CMTM7-201ENST00000334983 NESP48681 1621 aa30.59■■■□□ 2.49
CMTM7-201ENST00000334983 CADPSQ9ULU8 1353 aa30.59■■■□□ 2.49
CMTM7-201ENST00000334983 CFTRP13569 1480 aa30.51■■■□□ 2.47
CMTM7-201ENST00000334983 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.47
CMTM7-201ENST00000334983 LAMC3Q9Y6N6 1575 aa30.5■■■□□ 2.47
CMTM7-201ENST00000334983 FAM9AQ8IZU1 332 aaPredicted RBP30.42■■■□□ 2.46
CMTM7-201ENST00000334983 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
CMTM7-201ENST00000334983 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
CMTM7-201ENST00000334983 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
CMTM7-201ENST00000334983 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
CMTM7-201ENST00000334983 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
CMTM7-201ENST00000334983 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
CMTM7-201ENST00000334983 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
CMTM7-201ENST00000334983 EEA1Q15075 1411 aa30■■■□□ 2.39
CMTM7-201ENST00000334983 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
CMTM7-201ENST00000334983 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
CMTM7-201ENST00000334983 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
CMTM7-201ENST00000334983 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
CMTM7-201ENST00000334983 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
CMTM7-201ENST00000334983 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
CMTM7-201ENST00000334983 WDR62O43379 1518 aa29.84■■■□□ 2.37
CMTM7-201ENST00000334983 SOGA1O94964 1423 aa29.84■■■□□ 2.37
CMTM7-201ENST00000334983 WRNQ14191 1432 aaPredicted RBP eCLIP29.84■■■□□ 2.37
CMTM7-201ENST00000334983 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
CMTM7-201ENST00000334983 CUX1P39880 1505 aa29.78■■■□□ 2.36
CMTM7-201ENST00000334983 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
CMTM7-201ENST00000334983 TNIKQ9UKE5 1360 aa29.78■■■□□ 2.36
CMTM7-201ENST00000334983 CSRNP3Q8WYN3 585 aa29.76■■■□□ 2.36
CMTM7-201ENST00000334983 CUX2O14529 1486 aa29.68■■■□□ 2.34
CMTM7-201ENST00000334983 CEP162Q5TB80 1403 aa29.68■■■□□ 2.34
CMTM7-201ENST00000334983 SYNJ1O43426 1573 aa29.67■■■□□ 2.34
CMTM7-201ENST00000334983 RUSC2Q8N2Y8 1516 aa29.65■■■□□ 2.34
CMTM7-201ENST00000334983 GOLGA3Q08378 1498 aa29.62■■■□□ 2.33
CMTM7-201ENST00000334983 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
CMTM7-201ENST00000334983 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
CMTM7-201ENST00000334983 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
CMTM7-201ENST00000334983 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
CMTM7-201ENST00000334983 KIF21BO75037 1637 aa29.52■■■□□ 2.32
CMTM7-201ENST00000334983 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
CMTM7-201ENST00000334983 UBTFP17480 764 aaKnown RBP29.47■■■□□ 2.31
CMTM7-201ENST00000334983 IFT140Q96RY7 1462 aa29.47■■■□□ 2.31
CMTM7-201ENST00000334983 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
CMTM7-201ENST00000334983 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
CMTM7-201ENST00000334983 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
CMTM7-201ENST00000334983 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
CMTM7-201ENST00000334983 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
CMTM7-201ENST00000334983 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.27
CMTM7-201ENST00000334983 CLIP1P30622 1438 aa29.2■■■□□ 2.26
CMTM7-201ENST00000334983 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
CMTM7-201ENST00000334983 RAPGEF2Q9Y4G8 1499 aa29.17■■■□□ 2.26
CMTM7-201ENST00000334983 GAPVD1Q14C86 1478 aa29.14■■■□□ 2.26
CMTM7-201ENST00000334983 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
CMTM7-201ENST00000334983 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
CMTM7-201ENST00000334983 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
CMTM7-201ENST00000334983 VPS8Q8N3P4 1428 aa29.11■■■□□ 2.25
CMTM7-201ENST00000334983 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
CMTM7-201ENST00000334983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.08■■■□□ 2.25
CMTM7-201ENST00000334983 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
CMTM7-201ENST00000334983 GRIN2BQ13224 1484 aa29.05■■■□□ 2.24
CMTM7-201ENST00000334983 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
CMTM7-201ENST00000334983 IGF1RP08069 1367 aa28.97■■■□□ 2.23
CMTM7-201ENST00000334983 TTBK1Q5TCY1 1321 aaPredicted RBP28.96■■■□□ 2.23
CMTM7-201ENST00000334983 SNAPC4Q5SXM2 1469 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms