RNA–Protein interactions for RNA: ENST00000379341.8

PRDX4-202, Transcript of peroxiredoxin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDX4, Length 1,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-202ENST00000379341 NISCHQ9Y2I1 1504 aa53.42■■■■■ 6.14
PRDX4-202ENST00000379341 CCDC180Q9P1Z9 1646 aa47.63■■■■■ 5.21
PRDX4-202ENST00000379341 ABCC9O60706 1549 aa46.84■■■■■ 5.09
PRDX4-202ENST00000379341 RB1CC1Q8TDY2 1594 aa44.95■■■■■ 4.79
PRDX4-202ENST00000379341 NACADO15069 1562 aa44.84■■■■■ 4.77
PRDX4-202ENST00000379341 DCAF8L2P0C7V8 631 aa44.69■■■■■ 4.74
PRDX4-202ENST00000379341 MYO15BQ96JP2 1530 aa44.49■■■■■ 4.71
PRDX4-202ENST00000379341 ZCCHC6Q5VYS8 1495 aaKnown RBP44.46■■■■■ 4.71
PRDX4-202ENST00000379341 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.67
PRDX4-202ENST00000379341 UNC13AQ9UPW8 1703 aa43.93■■■■■ 4.62
PRDX4-202ENST00000379341 PABPN1Q86U42 306 aaKnown RBP eCLIP43.71■■■■■ 4.59
PRDX4-202ENST00000379341 BICRAQ9NZM4 1560 aa43.61■■■■■ 4.57
PRDX4-202ENST00000379341 SCRIBQ14160 1630 aa43.43■■■■■ 4.54
PRDX4-202ENST00000379341 DNAJC5BQ9UF47 199 aa43.22■■■■■ 4.51
PRDX4-202ENST00000379341 SHROOM4Q9ULL8 1493 aa43.14■■■■■ 4.5
PRDX4-202ENST00000379341 EIF4G1Q04637 1599 aaKnown RBP42.48■■■■■ 4.39
PRDX4-202ENST00000379341 CC2D2AQ9P2K1 1620 aa42.37■■■■■ 4.37
PRDX4-202ENST00000379341 CECR2Q9BXF3 1484 aa42.13■■■■■ 4.34
PRDX4-202ENST00000379341 SMARCA4P51532 1647 aa41.51■■■■■ 4.24
PRDX4-202ENST00000379341 BAZ1AQ9NRL2 1556 aaPredicted RBP41.42■■■■■ 4.22
PRDX4-202ENST00000379341 NCAPD3P42695 1498 aa41.37■■■■■ 4.21
PRDX4-202ENST00000379341 ATAD2BQ9ULI0 1458 aa41.35■■■■■ 4.21
PRDX4-202ENST00000379341 SMARCA2P51531 1590 aa41.3■■■■■ 4.2
PRDX4-202ENST00000379341 MROH2BQ7Z745 1585 aa41.16■■■■■ 4.18
PRDX4-202ENST00000379341 HMGXB3Q12766 1538 aa41.16■■■■■ 4.18
PRDX4-202ENST00000379341 PEG3Q9GZU2 1588 aa41.12■■■■■ 4.17
PRDX4-202ENST00000379341 BAZ1BQ9UIG0 1483 aaKnown RBP41■■■■■ 4.15
PRDX4-202ENST00000379341 WIZO95785 1651 aa40.71■■■■■ 4.11
PRDX4-202ENST00000379341 RSF1Q96T23 1441 aaPredicted RBP40.59■■■■■ 4.09
PRDX4-202ENST00000379341 NESP48681 1621 aa40.45■■■■■ 4.07
PRDX4-202ENST00000379341 ERCC6Q03468 1493 aa40.41■■■■■ 4.06
PRDX4-202ENST00000379341 LAMC3Q9Y6N6 1575 aa40.32■■■■■ 4.05
PRDX4-202ENST00000379341 TOP2AP11388 1531 aaKnown RBP40.27■■■■■ 4.04
PRDX4-202ENST00000379341 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
PRDX4-202ENST00000379341 CUX2O14529 1486 aa40.08■■■■■ 4.01
PRDX4-202ENST00000379341 PDS5BQ9NTI5 1447 aa40.06■■■■■ 4
PRDX4-202ENST00000379341 KIF21AQ7Z4S6 1674 aa39.99■■■■□ 3.99
PRDX4-202ENST00000379341 THOC2Q8NI27 1593 aaKnown RBP39.93■■■■□ 3.98
PRDX4-202ENST00000379341 CFTRP13569 1480 aa39.86■■■■□ 3.97
PRDX4-202ENST00000379341 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
PRDX4-202ENST00000379341 FANCD2Q9BXW9 1451 aa39.69■■■■□ 3.94
PRDX4-202ENST00000379341 MRC2Q9UBG0 1479 aa39.68■■■■□ 3.94
PRDX4-202ENST00000379341 CEP164Q9UPV0 1460 aa39.68■■■■□ 3.94
PRDX4-202ENST00000379341 WDR62O43379 1518 aa39.56■■■■□ 3.92
PRDX4-202ENST00000379341 PRDM2Q13029 1718 aa39.55■■■■□ 3.92
PRDX4-202ENST00000379341 SUPT5HO00267 1087 aaKnown RBP39.33■■■■□ 3.89
PRDX4-202ENST00000379341 URB2Q14146 1524 aaKnown RBP39.32■■■■□ 3.89
PRDX4-202ENST00000379341 DNAJC5Q9H3Z4 198 aa39.14■■■■□ 3.86
PRDX4-202ENST00000379341 TOPBP1Q92547 1522 aa39.03■■■■□ 3.84
PRDX4-202ENST00000379341 ABCC8Q09428 1581 aa39■■■■□ 3.83
PRDX4-202ENST00000379341 DNMBPQ6XZF7 1577 aa38.97■■■■□ 3.83
PRDX4-202ENST00000379341 IFT140Q96RY7 1462 aa38.86■■■■□ 3.81
PRDX4-202ENST00000379341 ZNF608Q9ULD9 1512 aaPredicted RBP38.7■■■■□ 3.79
PRDX4-202ENST00000379341 POLA1P09884 1462 aaPredicted RBP38.68■■■■□ 3.78
PRDX4-202ENST00000379341 CUX1P39880 1505 aa38.64■■■■□ 3.78
PRDX4-202ENST00000379341 TARBP1Q13395 1621 aaKnown RBP38.63■■■■□ 3.78
PRDX4-202ENST00000379341 EIF4G3O43432 1585 aaKnown RBP38.55■■■■□ 3.76
PRDX4-202ENST00000379341 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
PRDX4-202ENST00000379341 SOGA1O94964 1423 aa38.51■■■■□ 3.76
PRDX4-202ENST00000379341 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.76
PRDX4-202ENST00000379341 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.744e-6■■■■□ 21.7
PRDX4-202ENST00000379341 OSCARQ8IYS5 282 aa38.34■■■■□ 3.73
PRDX4-202ENST00000379341 WDR97A6NE52 1622 aa38.32■■■■□ 3.73
PRDX4-202ENST00000379341 TDRD9Q8NDG6 1382 aaKnown RBP38.31■■■■□ 3.72
PRDX4-202ENST00000379341 WRNQ14191 1432 aaPredicted RBP eCLIP38.28■■■■□ 3.72
PRDX4-202ENST00000379341 BIVM-ERCC5R4GMW8 1640 aa38.24■■■■□ 3.71
PRDX4-202ENST00000379341 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
PRDX4-202ENST00000379341 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
PRDX4-202ENST00000379341 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
PRDX4-202ENST00000379341 GRIN2BQ13224 1484 aa38.1■■■■□ 3.69
PRDX4-202ENST00000379341 CHD1O14646 1710 aa38.1■■■■□ 3.69
PRDX4-202ENST00000379341 SNAPC4Q5SXM2 1469 aa38.09■■■■□ 3.69
PRDX4-202ENST00000379341 GAPVD1Q14C86 1478 aa38.07■■■■□ 3.68
PRDX4-202ENST00000379341 ABCA5Q8WWZ7 1642 aa38.05■■■■□ 3.68
PRDX4-202ENST00000379341 MAGI1Q96QZ7 1491 aaPredicted RBP38.03■■■■□ 3.68
PRDX4-202ENST00000379341 PBRM1Q86U86 1689 aa38.01■■■■□ 3.68
PRDX4-202ENST00000379341 FBLN2P98095 1184 aa38.01■■■■□ 3.68
PRDX4-202ENST00000379341 SYNJ2O15056 1496 aa37.89■■■■□ 3.66
PRDX4-202ENST00000379341 CHMP7Q8WUX9 453 aaPredicted RBP37.87■■■■□ 3.65
PRDX4-202ENST00000379341 RIMBP3CA6NJZ7 1639 aa37.79■■■■□ 3.64
PRDX4-202ENST00000379341 RIMBP3BA6NNM3 1639 aa37.79■■■■□ 3.64
PRDX4-202ENST00000379341 RIMBP3Q9UFD9 1639 aa37.79■■■■□ 3.64
PRDX4-202ENST00000379341 ARHGEF11O15085 1522 aa37.76■■■■□ 3.63
PRDX4-202ENST00000379341 TRIM41Q8WV44 630 aa37.74■■■■□ 3.63
PRDX4-202ENST00000379341 ADAMTS12P58397 1594 aa37.71■■■■□ 3.63
PRDX4-202ENST00000379341 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
PRDX4-202ENST00000379341 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
PRDX4-202ENST00000379341 FHAD1B1AJZ9 1412 aa37.61■■■■□ 3.61
PRDX4-202ENST00000379341 GRIN2AQ12879 1464 aa37.61■■■■□ 3.61
PRDX4-202ENST00000379341 KIF27Q86VH2 1401 aa37.5■■■■□ 3.59
PRDX4-202ENST00000379341 NUP160Q12769 1436 aa37.46■■■■□ 3.59
PRDX4-202ENST00000379341 CEP170Q5SW79 1584 aa37.44■■■■□ 3.58
PRDX4-202ENST00000379341 ARAP1Q96P48 1450 aa37.44■■■■□ 3.58
PRDX4-202ENST00000379341 CYB5RLQ6IPT4 315 aa37.39■■■■□ 3.58
PRDX4-202ENST00000379341 IGF1RP08069 1367 aa37.38■■■■□ 3.57
PRDX4-202ENST00000379341 CUL7Q14999 1698 aa37.31■■■■□ 3.56
PRDX4-202ENST00000379341 SHROOM2Q13796 1616 aa37.21■■■■□ 3.55
PRDX4-202ENST00000379341 RUSC2Q8N2Y8 1516 aa37.16■■■■□ 3.54
PRDX4-202ENST00000379341 ERCC6L2Q5T890 1561 aa37.15■■■■□ 3.54
PRDX4-202ENST00000379341 CARMIL1Q5VZK9 1371 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms