RNA–Protein interactions for RNA: ENST00000252252.3

KRT6B-201, Transcript of keratin 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT6B, Length 2,282 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6B-201ENST00000252252 NISCHQ9Y2I1 1504 aa39.16■■■■□ 3.86
KRT6B-201ENST00000252252 SHROOM4Q9ULL8 1493 aa33.36■■■□□ 2.93
KRT6B-201ENST00000252252 CCDC180Q9P1Z9 1646 aa33.34■■■□□ 2.93
KRT6B-201ENST00000252252 ZCCHC6Q5VYS8 1495 aaKnown RBP33.17■■■□□ 2.9
KRT6B-201ENST00000252252 SUPT5HO00267 1087 aaKnown RBP32.71■■■□□ 2.83
KRT6B-201ENST00000252252 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
KRT6B-201ENST00000252252 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
KRT6B-201ENST00000252252 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
KRT6B-201ENST00000252252 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
KRT6B-201ENST00000252252 ABCC9O60706 1549 aa31.36■■■□□ 2.61
KRT6B-201ENST00000252252 SCRIBQ14160 1630 aa31.21■■■□□ 2.59
KRT6B-201ENST00000252252 HRCP23327 699 aa31.07■■■□□ 2.56
KRT6B-201ENST00000252252 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
KRT6B-201ENST00000252252 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.55
KRT6B-201ENST00000252252 LOC105371045A0A1W2PR82 267 aa30.93■■■□□ 2.54
KRT6B-201ENST00000252252 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.51
KRT6B-201ENST00000252252 NACADO15069 1562 aa30.73■■■□□ 2.51
KRT6B-201ENST00000252252 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
KRT6B-201ENST00000252252 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
KRT6B-201ENST00000252252 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
KRT6B-201ENST00000252252 PPARGC1BQ86YN6 1023 aaKnown RBP30.4■■■□□ 2.46
KRT6B-201ENST00000252252 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
KRT6B-201ENST00000252252 WIZO95785 1651 aa30.34■■■□□ 2.45
KRT6B-201ENST00000252252 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
KRT6B-201ENST00000252252 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
KRT6B-201ENST00000252252 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
KRT6B-201ENST00000252252 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
KRT6B-201ENST00000252252 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
KRT6B-201ENST00000252252 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
KRT6B-201ENST00000252252 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
KRT6B-201ENST00000252252 ZEB1P37275 1124 aaPredicted RBP29.71■■■□□ 2.35
KRT6B-201ENST00000252252 SMARCA2P51531 1590 aa29.7■■■□□ 2.34
KRT6B-201ENST00000252252 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
KRT6B-201ENST00000252252 ABCC8Q09428 1581 aa29.66■■■□□ 2.34
KRT6B-201ENST00000252252 BICRAQ9NZM4 1560 aa29.44■■■□□ 2.3
KRT6B-201ENST00000252252 SOGA1O94964 1423 aa29.35■■■□□ 2.29
KRT6B-201ENST00000252252 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.28
KRT6B-201ENST00000252252 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
KRT6B-201ENST00000252252 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
KRT6B-201ENST00000252252 CEP162Q5TB80 1403 aa29.27■■■□□ 2.28
KRT6B-201ENST00000252252 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
KRT6B-201ENST00000252252 EEA1Q15075 1411 aa29.22■■■□□ 2.27
KRT6B-201ENST00000252252 TNIKQ9UKE5 1360 aa29.2■■■□□ 2.26
KRT6B-201ENST00000252252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.25
KRT6B-201ENST00000252252 CSRNP3Q8WYN3 585 aa29.13■■■□□ 2.25
KRT6B-201ENST00000252252 CCER1Q8TC90 406 aaPredicted RBP29.04■■■□□ 2.24
KRT6B-201ENST00000252252 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
KRT6B-201ENST00000252252 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
KRT6B-201ENST00000252252 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.24
KRT6B-201ENST00000252252 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
KRT6B-201ENST00000252252 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
KRT6B-201ENST00000252252 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
KRT6B-201ENST00000252252 KIF21BO75037 1637 aa28.89■■■□□ 2.22
KRT6B-201ENST00000252252 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
KRT6B-201ENST00000252252 CLIP1P30622 1438 aa28.69■■■□□ 2.18
KRT6B-201ENST00000252252 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
KRT6B-201ENST00000252252 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
KRT6B-201ENST00000252252 RAPGEF2Q9Y4G8 1499 aa28.65■■■□□ 2.18
KRT6B-201ENST00000252252 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
KRT6B-201ENST00000252252 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
KRT6B-201ENST00000252252 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
KRT6B-201ENST00000252252 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
KRT6B-201ENST00000252252 HNRNPUL2Q1KMD3 747 aaKnown RBP28.42■■■□□ 2.14
KRT6B-201ENST00000252252 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
KRT6B-201ENST00000252252 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
KRT6B-201ENST00000252252 RANGAP1P46060 587 aaPredicted RBP28.38■■■□□ 2.13
KRT6B-201ENST00000252252 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
KRT6B-201ENST00000252252 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
KRT6B-201ENST00000252252 CUX1P39880 1505 aa28.36■■■□□ 2.13
KRT6B-201ENST00000252252 APLP2Q06481 763 aa28.34■■■□□ 2.13
KRT6B-201ENST00000252252 NEUROD1Q13562 356 aa28.33■■■□□ 2.13
KRT6B-201ENST00000252252 ZNF316A6NFI3 1004 aaPredicted RBP28.31■■■□□ 2.12
KRT6B-201ENST00000252252 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
KRT6B-201ENST00000252252 CFTRP13569 1480 aa28.22■■■□□ 2.11
KRT6B-201ENST00000252252 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
KRT6B-201ENST00000252252 CENPBP07199 599 aaPredicted RBP28.15■■■□□ 2.1
KRT6B-201ENST00000252252 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
KRT6B-201ENST00000252252 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
KRT6B-201ENST00000252252 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
KRT6B-201ENST00000252252 GTF3C3Q9Y5Q9 886 aa28.02■■■□□ 2.08
KRT6B-201ENST00000252252 ARHGAP35Q9NRY4 1499 aa28■■■□□ 2.07
KRT6B-201ENST00000252252 DHX57Q6P158 1386 aaKnown RBP27.95■■■□□ 2.07
KRT6B-201ENST00000252252 RRBP1Q9P2E9 1410 aaKnown RBP27.95■■■□□ 2.06
KRT6B-201ENST00000252252 MIER1Q8N108 512 aa27.93■■■□□ 2.06
KRT6B-201ENST00000252252 CUX2O14529 1486 aa27.91■■■□□ 2.06
KRT6B-201ENST00000252252 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
KRT6B-201ENST00000252252 IGF1RP08069 1367 aa27.86■■■□□ 2.05
KRT6B-201ENST00000252252 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
KRT6B-201ENST00000252252 YTHDC1Q96MU7 727 aaKnown RBP27.84■■■□□ 2.05
KRT6B-201ENST00000252252 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
KRT6B-201ENST00000252252 CCNB3Q8WWL7 1395 aa27.79■■■□□ 2.04
KRT6B-201ENST00000252252 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
KRT6B-201ENST00000252252 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
KRT6B-201ENST00000252252 MAP3K1Q13233 1512 aa27.7■■■□□ 2.02
KRT6B-201ENST00000252252 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
KRT6B-201ENST00000252252 ITGAEP38570 1179 aa27.62■■■□□ 2.01
KRT6B-201ENST00000252252 FANCD2Q9BXW9 1451 aa27.61■■■□□ 2.01
KRT6B-201ENST00000252252 LRRC9Q6ZRR7 1453 aa27.6■■■□□ 2.01
KRT6B-201ENST00000252252 CFAP43Q8NDM7 1665 aa27.58■■■□□ 2.01
KRT6B-201ENST00000252252 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms