RNA–Protein interactions for RNA: ENST00000380384.5

RPS6-203, Transcript of ribosomal protein S6, humanhuman

TSL 1 (best) BASIC

Gene RPS6, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6-203ENST00000380384 NISCHQ9Y2I1 1504 aa52.17■■■■■ 5.94
RPS6-203ENST00000380384 CCDC180Q9P1Z9 1646 aa46.43■■■■■ 5.02
RPS6-203ENST00000380384 ABCC9O60706 1549 aa45.38■■■■■ 4.86
RPS6-203ENST00000380384 RB1CC1Q8TDY2 1594 aa43.67■■■■■ 4.58
RPS6-203ENST00000380384 NACADO15069 1562 aa43.61■■■■■ 4.57
RPS6-203ENST00000380384 DCAF8L2P0C7V8 631 aa43.51■■■■■ 4.56
RPS6-203ENST00000380384 ZCCHC6Q5VYS8 1495 aaKnown RBP43.47■■■■■ 4.55
RPS6-203ENST00000380384 MYO15BQ96JP2 1530 aa43.34■■■■■ 4.53
RPS6-203ENST00000380384 DCAF1Q9Y4B6 1507 aa43.17■■■■■ 4.5
RPS6-203ENST00000380384 UNC13AQ9UPW8 1703 aa42.78■■■■■ 4.44
RPS6-203ENST00000380384 BICRAQ9NZM4 1560 aa42.37■■■■■ 4.37
RPS6-203ENST00000380384 PABPN1Q86U42 306 aaKnown RBP eCLIP42.37■■■■■ 4.37
RPS6-203ENST00000380384 SCRIBQ14160 1630 aa42.34■■■■■ 4.37
RPS6-203ENST00000380384 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
RPS6-203ENST00000380384 DNAJC5BQ9UF47 199 aa41.64■■■■■ 4.26
RPS6-203ENST00000380384 EIF4G1Q04637 1599 aaKnown RBP41.24■■■■■ 4.19
RPS6-203ENST00000380384 CC2D2AQ9P2K1 1620 aa41.08■■■■■ 4.17
RPS6-203ENST00000380384 CECR2Q9BXF3 1484 aa40.77■■■■■ 4.12
RPS6-203ENST00000380384 SMARCA4P51532 1647 aa40.51■■■■■ 4.08
RPS6-203ENST00000380384 BAZ1AQ9NRL2 1556 aaPredicted RBP40.44■■■■■ 4.06
RPS6-203ENST00000380384 ATAD2BQ9ULI0 1458 aa40.25■■■■■ 4.03
RPS6-203ENST00000380384 NCAPD3P42695 1498 aa40.22■■■■■ 4.03
RPS6-203ENST00000380384 MROH2BQ7Z745 1585 aa40.22■■■■■ 4.03
RPS6-203ENST00000380384 SMARCA2P51531 1590 aa40.21■■■■■ 4.03
RPS6-203ENST00000380384 PEG3Q9GZU2 1588 aa40.11■■■■■ 4.01
RPS6-203ENST00000380384 HMGXB3Q12766 1538 aa40.06■■■■■ 4
RPS6-203ENST00000380384 BAZ1BQ9UIG0 1483 aaKnown RBP39.92■■■■□ 3.98
RPS6-203ENST00000380384 WIZO95785 1651 aa39.81■■■■□ 3.96
RPS6-203ENST00000380384 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
RPS6-203ENST00000380384 TOP2AP11388 1531 aaKnown RBP39.37■■■■□ 3.89
RPS6-203ENST00000380384 NESP48681 1621 aa39.29■■■■□ 3.88
RPS6-203ENST00000380384 LAMC3Q9Y6N6 1575 aa39.19■■■■□ 3.86
RPS6-203ENST00000380384 ERCC6Q03468 1493 aa39.1■■■■□ 3.85
RPS6-203ENST00000380384 CADPSQ9ULU8 1353 aa39.04■■■■□ 3.84
RPS6-203ENST00000380384 CCDC88BA6NC98 1476 aa38.88■■■■□ 3.82
RPS6-203ENST00000380384 PDS5BQ9NTI5 1447 aa38.88■■■■□ 3.81
RPS6-203ENST00000380384 KIF21AQ7Z4S6 1674 aa38.88■■■■□ 3.81
RPS6-203ENST00000380384 CFTRP13569 1480 aa38.83■■■■□ 3.81
RPS6-203ENST00000380384 THOC2Q8NI27 1593 aaKnown RBP38.73■■■■□ 3.79
RPS6-203ENST00000380384 CUX2O14529 1486 aa38.7■■■■□ 3.79
RPS6-203ENST00000380384 SUPT5HO00267 1087 aaKnown RBP38.68■■■■□ 3.78
RPS6-203ENST00000380384 PRDM2Q13029 1718 aa38.63■■■■□ 3.78
RPS6-203ENST00000380384 FANCD2Q9BXW9 1451 aa38.61■■■■□ 3.77
RPS6-203ENST00000380384 CEP164Q9UPV0 1460 aa38.56■■■■□ 3.76
RPS6-203ENST00000380384 MRC2Q9UBG0 1479 aa38.51■■■■□ 3.76
RPS6-203ENST00000380384 WDR62O43379 1518 aa38.41■■■■□ 3.74
RPS6-203ENST00000380384 URB2Q14146 1524 aaKnown RBP38.24■■■■□ 3.71
RPS6-203ENST00000380384 TOPBP1Q92547 1522 aa38.01■■■■□ 3.68
RPS6-203ENST00000380384 ABCC8Q09428 1581 aa37.98■■■■□ 3.67
RPS6-203ENST00000380384 DNMBPQ6XZF7 1577 aa37.98■■■■□ 3.67
RPS6-203ENST00000380384 IFT140Q96RY7 1462 aa37.75■■■■□ 3.63
RPS6-203ENST00000380384 CUX1P39880 1505 aa37.73■■■■□ 3.63
RPS6-203ENST00000380384 POLA1P09884 1462 aaPredicted RBP37.69■■■■□ 3.62
RPS6-203ENST00000380384 TARBP1Q13395 1621 aaKnown RBP37.62■■■■□ 3.61
RPS6-203ENST00000380384 ZNF608Q9ULD9 1512 aaPredicted RBP37.6■■■■□ 3.61
RPS6-203ENST00000380384 FGD5Q6ZNL6 1462 aa37.59■■■■□ 3.61
RPS6-203ENST00000380384 RAD54L2Q9Y4B4 1467 aa37.51■■■■□ 3.6
RPS6-203ENST00000380384 SOGA1O94964 1423 aa37.49■■■■□ 3.59
RPS6-203ENST00000380384 DNAJC5Q9H3Z4 198 aa37.48■■■■□ 3.59
RPS6-203ENST00000380384 EIF4G3O43432 1585 aaKnown RBP37.48■■■■□ 3.59
RPS6-203ENST00000380384 WRNQ14191 1432 aaPredicted RBP eCLIP37.46■■■■□ 3.592e-39■■■□□ 18.2
RPS6-203ENST00000380384 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
RPS6-203ENST00000380384 SYNJ1O43426 1573 aa37.41■■■■□ 3.58
RPS6-203ENST00000380384 TOP2BQ02880 1626 aa37.41■■■■□ 3.58
RPS6-203ENST00000380384 AQRO60306 1485 aaKnown RBP eCLIP37.37■■■■□ 3.573e-12■■■■□ 25.9
RPS6-203ENST00000380384 WDR97A6NE52 1622 aa37.35■■■■□ 3.57
RPS6-203ENST00000380384 TDRD9Q8NDG6 1382 aaKnown RBP37.29■■■■□ 3.56
RPS6-203ENST00000380384 ABCA10Q8WWZ4 1543 aa37.23■■■■□ 3.55
RPS6-203ENST00000380384 ABCA5Q8WWZ7 1642 aa37.11■■■■□ 3.53
RPS6-203ENST00000380384 GAPVD1Q14C86 1478 aa37.08■■■■□ 3.53
RPS6-203ENST00000380384 PBRM1Q86U86 1689 aa37.08■■■■□ 3.53
RPS6-203ENST00000380384 GRIN2BQ13224 1484 aa37.07■■■■□ 3.53
RPS6-203ENST00000380384 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
RPS6-203ENST00000380384 CHD1O14646 1710 aa37.04■■■■□ 3.52
RPS6-203ENST00000380384 SNAPC4Q5SXM2 1469 aa37.03■■■■□ 3.52
RPS6-203ENST00000380384 MAGI1Q96QZ7 1491 aaPredicted RBP36.98■■■■□ 3.51
RPS6-203ENST00000380384 FBLN2P98095 1184 aa36.88■■■■□ 3.49
RPS6-203ENST00000380384 SYNJ2O15056 1496 aa36.84■■■■□ 3.49
RPS6-203ENST00000380384 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
RPS6-203ENST00000380384 CHMP7Q8WUX9 453 aaPredicted RBP36.78■■■■□ 3.48
RPS6-203ENST00000380384 ADAMTS12P58397 1594 aa36.75■■■■□ 3.47
RPS6-203ENST00000380384 KIF27Q86VH2 1401 aa36.66■■■■□ 3.46
RPS6-203ENST00000380384 FHAD1B1AJZ9 1412 aa36.65■■■■□ 3.46
RPS6-203ENST00000380384 GRIN2AQ12879 1464 aa36.61■■■■□ 3.45
RPS6-203ENST00000380384 CLASP1Q7Z460 1538 aa36.6■■■■□ 3.45
RPS6-203ENST00000380384 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
RPS6-203ENST00000380384 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
RPS6-203ENST00000380384 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
RPS6-203ENST00000380384 IGF1RP08069 1367 aa36.52■■■■□ 3.44
RPS6-203ENST00000380384 TRIM41Q8WV44 630 aa36.52■■■■□ 3.44
RPS6-203ENST00000380384 ARHGEF11O15085 1522 aa36.51■■■■□ 3.44
RPS6-203ENST00000380384 CUL7Q14999 1698 aa36.47■■■■□ 3.43
RPS6-203ENST00000380384 CEP170Q5SW79 1584 aa36.45■■■■□ 3.43
RPS6-203ENST00000380384 NUP160Q12769 1436 aa36.45■■■■□ 3.43
RPS6-203ENST00000380384 RUSC2Q8N2Y8 1516 aa36.37■■■■□ 3.41
RPS6-203ENST00000380384 CARMIL1Q5VZK9 1371 aa36.29■■■■□ 3.4
RPS6-203ENST00000380384 ARAP1Q96P48 1450 aa36.22■■■■□ 3.39
RPS6-203ENST00000380384 SHROOM2Q13796 1616 aa36.21■■■■□ 3.39
RPS6-203ENST00000380384 CYB5RLQ6IPT4 315 aa36.12■■■■□ 3.37
RPS6-203ENST00000380384 CHIC1Q5VXU3 224 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms