RNA–Protein interactions for RNA: ENST00000408907.3

PSMB11-201, Transcript of proteasome subunit beta 11, humanhuman

APPRIS P1 BASIC

Gene PSMB11, Length 2,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB11-201ENST00000408907 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
PSMB11-201ENST00000408907 CCDC180Q9P1Z9 1646 aa35.46■■■■□ 3.27
PSMB11-201ENST00000408907 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
PSMB11-201ENST00000408907 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
PSMB11-201ENST00000408907 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
PSMB11-201ENST00000408907 DCAF8L2P0C7V8 631 aa33.67■■■□□ 2.98
PSMB11-201ENST00000408907 MYO15BQ96JP2 1530 aa33.37■■■□□ 2.93
PSMB11-201ENST00000408907 SUPT5HO00267 1087 aaKnown RBP33.36■■■□□ 2.93
PSMB11-201ENST00000408907 NACADO15069 1562 aa32.84■■■□□ 2.85
PSMB11-201ENST00000408907 ABCC9O60706 1549 aa32.7■■■□□ 2.82
PSMB11-201ENST00000408907 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
PSMB11-201ENST00000408907 CHIC1Q5VXU3 224 aa32.48■■■□□ 2.79
PSMB11-201ENST00000408907 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
PSMB11-201ENST00000408907 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
PSMB11-201ENST00000408907 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
PSMB11-201ENST00000408907 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.69
PSMB11-201ENST00000408907 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
PSMB11-201ENST00000408907 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
PSMB11-201ENST00000408907 WIZO95785 1651 aa31.59■■■□□ 2.65
PSMB11-201ENST00000408907 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
PSMB11-201ENST00000408907 TRIM41Q8WV44 630 aa31.35■■■□□ 2.61
PSMB11-201ENST00000408907 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
PSMB11-201ENST00000408907 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
PSMB11-201ENST00000408907 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
PSMB11-201ENST00000408907 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
PSMB11-201ENST00000408907 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
PSMB11-201ENST00000408907 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
PSMB11-201ENST00000408907 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
PSMB11-201ENST00000408907 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.56
PSMB11-201ENST00000408907 PCGF6Q9BYE7 350 aa30.77■■■□□ 2.52
PSMB11-201ENST00000408907 FAM9AQ8IZU1 332 aaPredicted RBP30.73■■■□□ 2.51
PSMB11-201ENST00000408907 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
PSMB11-201ENST00000408907 HRCP23327 699 aa30.7■■■□□ 2.5
PSMB11-201ENST00000408907 TRIM26Q12899 539 aaPredicted RBP30.62■■■□□ 2.49
PSMB11-201ENST00000408907 ABCC8Q09428 1581 aa30.61■■■□□ 2.49
PSMB11-201ENST00000408907 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
PSMB11-201ENST00000408907 EEA1Q15075 1411 aa30.49■■■□□ 2.47
PSMB11-201ENST00000408907 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
PSMB11-201ENST00000408907 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
PSMB11-201ENST00000408907 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
PSMB11-201ENST00000408907 SOGA1O94964 1423 aa30.27■■■□□ 2.44
PSMB11-201ENST00000408907 CSRNP3Q8WYN3 585 aa30.21■■■□□ 2.43
PSMB11-201ENST00000408907 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
PSMB11-201ENST00000408907 TNIKQ9UKE5 1360 aa30.18■■■□□ 2.42
PSMB11-201ENST00000408907 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
PSMB11-201ENST00000408907 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
PSMB11-201ENST00000408907 GOLGA3Q08378 1498 aa30.06■■■□□ 2.4
PSMB11-201ENST00000408907 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
PSMB11-201ENST00000408907 TOP2BQ02880 1626 aa30.02■■■□□ 2.4
PSMB11-201ENST00000408907 KIF21BO75037 1637 aa29.99■■■□□ 2.39
PSMB11-201ENST00000408907 CEP164Q9UPV0 1460 aa29.97■■■□□ 2.39
PSMB11-201ENST00000408907 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
PSMB11-201ENST00000408907 ZEB1P37275 1124 aaPredicted RBP29.94■■■□□ 2.38
PSMB11-201ENST00000408907 CFTRP13569 1480 aa29.9■■■□□ 2.38
PSMB11-201ENST00000408907 UBTFP17480 764 aaKnown RBP29.86■■■□□ 2.37
PSMB11-201ENST00000408907 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
PSMB11-201ENST00000408907 PPARGC1BQ86YN6 1023 aaKnown RBP29.72■■■□□ 2.35
PSMB11-201ENST00000408907 CUX1P39880 1505 aa29.7■■■□□ 2.34
PSMB11-201ENST00000408907 ERICH3Q5RHP9 1530 aa29.64■■■□□ 2.33
PSMB11-201ENST00000408907 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
PSMB11-201ENST00000408907 RAPGEF2Q9Y4G8 1499 aa29.61■■■□□ 2.33
PSMB11-201ENST00000408907 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
PSMB11-201ENST00000408907 CLIP1P30622 1438 aa29.6■■■□□ 2.33
PSMB11-201ENST00000408907 PRXQ9BXM0 1461 aa29.58■■■□□ 2.33
PSMB11-201ENST00000408907 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
PSMB11-201ENST00000408907 VPS8Q8N3P4 1428 aa29.49■■■□□ 2.31
PSMB11-201ENST00000408907 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
PSMB11-201ENST00000408907 APLP2Q06481 763 aa29.24■■■□□ 2.27
PSMB11-201ENST00000408907 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
PSMB11-201ENST00000408907 CUX2O14529 1486 aa29.22■■■□□ 2.27
PSMB11-201ENST00000408907 CCER1Q8TC90 406 aaPredicted RBP29.21■■■□□ 2.27
PSMB11-201ENST00000408907 IGF1RP08069 1367 aa29.19■■■□□ 2.26
PSMB11-201ENST00000408907 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
PSMB11-201ENST00000408907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.17■■■□□ 2.26
PSMB11-201ENST00000408907 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
PSMB11-201ENST00000408907 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
PSMB11-201ENST00000408907 LAMC3Q9Y6N6 1575 aa29.12■■■□□ 2.25
PSMB11-201ENST00000408907 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
PSMB11-201ENST00000408907 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
PSMB11-201ENST00000408907 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
PSMB11-201ENST00000408907 ARHGAP35Q9NRY4 1499 aa29.01■■■□□ 2.24
PSMB11-201ENST00000408907 RANGAP1P46060 587 aaPredicted RBP29■■■□□ 2.23
PSMB11-201ENST00000408907 NESP48681 1621 aa28.98■■■□□ 2.23
PSMB11-201ENST00000408907 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
PSMB11-201ENST00000408907 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
PSMB11-201ENST00000408907 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
PSMB11-201ENST00000408907 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PSMB11-201ENST00000408907 CUL7Q14999 1698 aa28.86■■■□□ 2.21
PSMB11-201ENST00000408907 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
PSMB11-201ENST00000408907 URB2Q14146 1524 aaKnown RBP28.82■■■□□ 2.2
PSMB11-201ENST00000408907 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
PSMB11-201ENST00000408907 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
PSMB11-201ENST00000408907 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
PSMB11-201ENST00000408907 KANK4Q5T7N3 995 aaPredicted RBP28.76■■■□□ 2.2
PSMB11-201ENST00000408907 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
PSMB11-201ENST00000408907 EFCAB5A4FU69 1503 aa28.71■■■□□ 2.19
PSMB11-201ENST00000408907 ABCA5Q8WWZ7 1642 aa28.68■■■□□ 2.18
PSMB11-201ENST00000408907 TIAM1Q13009 1591 aa28.68■■■□□ 2.18
PSMB11-201ENST00000408907 CLSPNQ9HAW4 1339 aa28.64■■■□□ 2.17
PSMB11-201ENST00000408907 CTTNBP2Q8WZ74 1663 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms