RNA–Protein interactions for RNA: ENST00000340171.6

C3orf33-201, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 1 (best) BASIC

Gene C3orf33, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-201ENST00000340171 NISCHQ9Y2I1 1504 aa46.82■■■■■ 5.09
C3orf33-201ENST00000340171 CCDC180Q9P1Z9 1646 aa41.22■■■■■ 4.19
C3orf33-201ENST00000340171 ABCC9O60706 1549 aa39.84■■■■□ 3.97
C3orf33-201ENST00000340171 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
C3orf33-201ENST00000340171 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.84
C3orf33-201ENST00000340171 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
C3orf33-201ENST00000340171 NACADO15069 1562 aa38.56■■■■□ 3.76
C3orf33-201ENST00000340171 RB1CC1Q8TDY2 1594 aa38.47■■■■□ 3.75
C3orf33-201ENST00000340171 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
C3orf33-201ENST00000340171 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
C3orf33-201ENST00000340171 UNC13AQ9UPW8 1703 aa37.77■■■■□ 3.64
C3orf33-201ENST00000340171 SHROOM4Q9ULL8 1493 aa37.75■■■■□ 3.63
C3orf33-201ENST00000340171 PABPN1Q86U42 306 aaKnown RBP eCLIP37.41■■■■□ 3.58
C3orf33-201ENST00000340171 BICRAQ9NZM4 1560 aa37.36■■■■□ 3.57
C3orf33-201ENST00000340171 CECR2Q9BXF3 1484 aa36.51■■■■□ 3.43
C3orf33-201ENST00000340171 EIF4G1Q04637 1599 aaKnown RBP36.31■■■■□ 3.4
C3orf33-201ENST00000340171 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
C3orf33-201ENST00000340171 BAZ1AQ9NRL2 1556 aaPredicted RBP36.21■■■■□ 3.39
C3orf33-201ENST00000340171 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
C3orf33-201ENST00000340171 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
C3orf33-201ENST00000340171 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
C3orf33-201ENST00000340171 DNAJC5BQ9UF47 199 aa35.9■■■■□ 3.34
C3orf33-201ENST00000340171 WIZO95785 1651 aa35.89■■■■□ 3.34
C3orf33-201ENST00000340171 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
C3orf33-201ENST00000340171 ATAD2BQ9ULI0 1458 aa35.79■■■■□ 3.32
C3orf33-201ENST00000340171 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
C3orf33-201ENST00000340171 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
C3orf33-201ENST00000340171 NCAPD3P42695 1498 aa35.57■■■■□ 3.29
C3orf33-201ENST00000340171 BAZ1BQ9UIG0 1483 aaKnown RBP35.57■■■■□ 3.29
C3orf33-201ENST00000340171 HMGXB3Q12766 1538 aa35.49■■■■□ 3.27
C3orf33-201ENST00000340171 TOP2AP11388 1531 aaKnown RBP35.42■■■■□ 3.26
C3orf33-201ENST00000340171 CCDC88BA6NC98 1476 aa35.05■■■■□ 3.2
C3orf33-201ENST00000340171 NESP48681 1621 aa34.72■■■■□ 3.15
C3orf33-201ENST00000340171 CADPSQ9ULU8 1353 aa34.63■■■■□ 3.13
C3orf33-201ENST00000340171 CFTRP13569 1480 aa34.58■■■■□ 3.13
C3orf33-201ENST00000340171 LAMC3Q9Y6N6 1575 aa34.55■■■■□ 3.12
C3orf33-201ENST00000340171 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
C3orf33-201ENST00000340171 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
C3orf33-201ENST00000340171 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
C3orf33-201ENST00000340171 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
C3orf33-201ENST00000340171 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
C3orf33-201ENST00000340171 CEP164Q9UPV0 1460 aa34.17■■■■□ 3.06
C3orf33-201ENST00000340171 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
C3orf33-201ENST00000340171 CHIC1Q5VXU3 224 aa34.08■■■■□ 3.05
C3orf33-201ENST00000340171 MRC2Q9UBG0 1479 aa33.94■■■■□ 3.02
C3orf33-201ENST00000340171 THOC2Q8NI27 1593 aaKnown RBP33.93■■■■□ 3.02
C3orf33-201ENST00000340171 URB2Q14146 1524 aaKnown RBP33.93■■■■□ 3.02
C3orf33-201ENST00000340171 WRNQ14191 1432 aaPredicted RBP eCLIP33.92■■■■□ 3.02
C3orf33-201ENST00000340171 CUX1P39880 1505 aa33.89■■■■□ 3.02
C3orf33-201ENST00000340171 SYNJ1O43426 1573 aa33.87■■■■□ 3.01
C3orf33-201ENST00000340171 TOPBP1Q92547 1522 aa33.83■■■■□ 3.01
C3orf33-201ENST00000340171 DNMBPQ6XZF7 1577 aa33.83■■■■□ 3.01
C3orf33-201ENST00000340171 WDR62O43379 1518 aa33.79■■■■□ 3
C3orf33-201ENST00000340171 TOP2BQ02880 1626 aa33.74■■■□□ 2.99
C3orf33-201ENST00000340171 BIVM-ERCC5R4GMW8 1640 aa33.73■■■□□ 2.99
C3orf33-201ENST00000340171 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
C3orf33-201ENST00000340171 FGD5Q6ZNL6 1462 aa33.66■■■□□ 2.98
C3orf33-201ENST00000340171 POLA1P09884 1462 aaPredicted RBP33.6■■■□□ 2.97
C3orf33-201ENST00000340171 RAD54L2Q9Y4B4 1467 aa33.53■■■□□ 2.96
C3orf33-201ENST00000340171 CUX2O14529 1486 aa33.51■■■□□ 2.95
C3orf33-201ENST00000340171 SOGA1O94964 1423 aa33.46■■■□□ 2.95
C3orf33-201ENST00000340171 TARBP1Q13395 1621 aaKnown RBP33.4■■■□□ 2.94
C3orf33-201ENST00000340171 IFT140Q96RY7 1462 aa33.36■■■□□ 2.93
C3orf33-201ENST00000340171 WDR97A6NE52 1622 aa33.32■■■□□ 2.92
C3orf33-201ENST00000340171 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
C3orf33-201ENST00000340171 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
C3orf33-201ENST00000340171 TDRD9Q8NDG6 1382 aaKnown RBP33.27■■■□□ 2.92
C3orf33-201ENST00000340171 RUSC2Q8N2Y8 1516 aa33.21■■■□□ 2.91
C3orf33-201ENST00000340171 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.913e-6■■■□□ 15.3
C3orf33-201ENST00000340171 EIF4G3O43432 1585 aaKnown RBP33.17■■■□□ 2.9
C3orf33-201ENST00000340171 FAM9AQ8IZU1 332 aaPredicted RBP33.16■■■□□ 2.9
C3orf33-201ENST00000340171 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
C3orf33-201ENST00000340171 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
C3orf33-201ENST00000340171 GAPVD1Q14C86 1478 aa33.09■■■□□ 2.89
C3orf33-201ENST00000340171 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
C3orf33-201ENST00000340171 GRIN2BQ13224 1484 aa32.94■■■□□ 2.86
C3orf33-201ENST00000340171 IGF1RP08069 1367 aa32.9■■■□□ 2.86
C3orf33-201ENST00000340171 SNAPC4Q5SXM2 1469 aa32.89■■■□□ 2.86
C3orf33-201ENST00000340171 EEA1Q15075 1411 aa32.88■■■□□ 2.85
C3orf33-201ENST00000340171 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
C3orf33-201ENST00000340171 CSRNP3Q8WYN3 585 aa32.85■■■□□ 2.85
C3orf33-201ENST00000340171 EHMT2Q96KQ7 1210 aa32.82■■■□□ 2.85
C3orf33-201ENST00000340171 LOC105371045A0A1W2PR82 267 aa32.78■■■□□ 2.84
C3orf33-201ENST00000340171 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
C3orf33-201ENST00000340171 CUL7Q14999 1698 aa32.75■■■□□ 2.83
C3orf33-201ENST00000340171 MAGI1Q96QZ7 1491 aaPredicted RBP32.75■■■□□ 2.83
C3orf33-201ENST00000340171 CARMIL1Q5VZK9 1371 aa32.73■■■□□ 2.83
C3orf33-201ENST00000340171 FBLN2P98095 1184 aa32.73■■■□□ 2.83
C3orf33-201ENST00000340171 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
C3orf33-201ENST00000340171 PRXQ9BXM0 1461 aa32.66■■■□□ 2.82
C3orf33-201ENST00000340171 CHD1O14646 1710 aa32.65■■■□□ 2.82
C3orf33-201ENST00000340171 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
C3orf33-201ENST00000340171 CHMP7Q8WUX9 453 aaPredicted RBP32.63■■■□□ 2.81
C3orf33-201ENST00000340171 RAPGEF2Q9Y4G8 1499 aa32.62■■■□□ 2.81
C3orf33-201ENST00000340171 KIF21BO75037 1637 aa32.58■■■□□ 2.81
C3orf33-201ENST00000340171 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
C3orf33-201ENST00000340171 GOLGA3Q08378 1498 aa32.48■■■□□ 2.79
C3orf33-201ENST00000340171 UBTFP17480 764 aaKnown RBP32.42■■■□□ 2.78
C3orf33-201ENST00000340171 CEP170Q5SW79 1584 aa32.42■■■□□ 2.78
C3orf33-201ENST00000340171 NUP160Q12769 1436 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms