RNA–Protein interactions for RNA: ENST00000345598.9

APLP2-204, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 1 (best) BASIC

Gene APLP2, Length 1,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-204ENST00000345598 NISCHQ9Y2I1 1504 aa48.01■■■■■ 5.28
APLP2-204ENST00000345598 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
APLP2-204ENST00000345598 ABCC9O60706 1549 aa40.94■■■■■ 4.14
APLP2-204ENST00000345598 DCAF8L2P0C7V8 631 aa40.2■■■■■ 4.03
APLP2-204ENST00000345598 ZCCHC6Q5VYS8 1495 aaKnown RBP40.1■■■■■ 4.01
APLP2-204ENST00000345598 NACADO15069 1562 aa39.62■■■■□ 3.93
APLP2-204ENST00000345598 DCAF1Q9Y4B6 1507 aa39.61■■■■□ 3.93
APLP2-204ENST00000345598 RB1CC1Q8TDY2 1594 aa39.53■■■■□ 3.92
APLP2-204ENST00000345598 MYO15BQ96JP2 1530 aa39.5■■■■□ 3.91
APLP2-204ENST00000345598 SCRIBQ14160 1630 aa38.82■■■■□ 3.81
APLP2-204ENST00000345598 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
APLP2-204ENST00000345598 SHROOM4Q9ULL8 1493 aa38.64■■■■□ 3.78
APLP2-204ENST00000345598 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.75
APLP2-204ENST00000345598 BICRAQ9NZM4 1560 aa38.32■■■■□ 3.73
APLP2-204ENST00000345598 CECR2Q9BXF3 1484 aa37.43■■■■□ 3.58
APLP2-204ENST00000345598 EIF4G1Q04637 1599 aaKnown RBP37.27■■■■□ 3.56
APLP2-204ENST00000345598 BAZ1AQ9NRL2 1556 aaPredicted RBP37.15■■■■□ 3.54
APLP2-204ENST00000345598 SMARCA4P51532 1647 aa37.11■■■■□ 3.53
APLP2-204ENST00000345598 MROH2BQ7Z745 1585 aa37.07■■■■□ 3.53
APLP2-204ENST00000345598 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.51
APLP2-204ENST00000345598 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
APLP2-204ENST00000345598 RSF1Q96T23 1441 aaPredicted RBP36.89■■■■□ 3.5
APLP2-204ENST00000345598 WIZO95785 1651 aa36.75■■■■□ 3.47
APLP2-204ENST00000345598 ATAD2BQ9ULI0 1458 aa36.74■■■■□ 3.47
APLP2-204ENST00000345598 SUPT5HO00267 1087 aaKnown RBP36.74■■■■□ 3.47
APLP2-204ENST00000345598 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
APLP2-204ENST00000345598 PEG3Q9GZU2 1588 aa36.63■■■■□ 3.46
APLP2-204ENST00000345598 NCAPD3P42695 1498 aa36.57■■■■□ 3.45
APLP2-204ENST00000345598 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
APLP2-204ENST00000345598 HMGXB3Q12766 1538 aa36.41■■■■□ 3.42
APLP2-204ENST00000345598 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
APLP2-204ENST00000345598 CCDC88BA6NC98 1476 aa35.94■■■■□ 3.34
APLP2-204ENST00000345598 NESP48681 1621 aa35.63■■■■□ 3.29
APLP2-204ENST00000345598 CADPSQ9ULU8 1353 aa35.61■■■■□ 3.29
APLP2-204ENST00000345598 CFTRP13569 1480 aa35.5■■■■□ 3.27
APLP2-204ENST00000345598 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
APLP2-204ENST00000345598 PDS5BQ9NTI5 1447 aa35.28■■■■□ 3.24
APLP2-204ENST00000345598 PRDM2Q13029 1718 aa35.26■■■■□ 3.23
APLP2-204ENST00000345598 ERCC6Q03468 1493 aa35.21■■■■□ 3.23
APLP2-204ENST00000345598 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
APLP2-204ENST00000345598 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
APLP2-204ENST00000345598 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
APLP2-204ENST00000345598 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
APLP2-204ENST00000345598 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
APLP2-204ENST00000345598 URB2Q14146 1524 aaKnown RBP34.81■■■■□ 3.16
APLP2-204ENST00000345598 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
APLP2-204ENST00000345598 WRNQ14191 1432 aaPredicted RBP eCLIP34.77■■■■□ 3.161e-6■■■■■ 58.5
APLP2-204ENST00000345598 CUX1P39880 1505 aa34.72■■■■□ 3.15
APLP2-204ENST00000345598 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
APLP2-204ENST00000345598 DNMBPQ6XZF7 1577 aa34.69■■■■□ 3.14
APLP2-204ENST00000345598 WDR62O43379 1518 aa34.68■■■■□ 3.14
APLP2-204ENST00000345598 SYNJ1O43426 1573 aa34.65■■■■□ 3.14
APLP2-204ENST00000345598 TRIM41Q8WV44 630 aa34.58■■■■□ 3.13
APLP2-204ENST00000345598 CHIC1Q5VXU3 224 aa34.58■■■■□ 3.13
APLP2-204ENST00000345598 TOP2BQ02880 1626 aa34.57■■■■□ 3.12
APLP2-204ENST00000345598 BIVM-ERCC5R4GMW8 1640 aa34.53■■■■□ 3.12
APLP2-204ENST00000345598 FGD5Q6ZNL6 1462 aa34.5■■■■□ 3.11
APLP2-204ENST00000345598 POLA1P09884 1462 aaPredicted RBP34.47■■■■□ 3.11
APLP2-204ENST00000345598 CUX2O14529 1486 aa34.43■■■■□ 3.1
APLP2-204ENST00000345598 SOGA1O94964 1423 aa34.39■■■■□ 3.1
APLP2-204ENST00000345598 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
APLP2-204ENST00000345598 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
APLP2-204ENST00000345598 TARBP1Q13395 1621 aaKnown RBP34.25■■■■□ 3.07
APLP2-204ENST00000345598 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
APLP2-204ENST00000345598 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
APLP2-204ENST00000345598 ABCA10Q8WWZ4 1543 aa34.14■■■■□ 3.06
APLP2-204ENST00000345598 AQRO60306 1485 aaKnown RBP eCLIP34.1■■■■□ 3.052e-7■■■■■ 28.6
APLP2-204ENST00000345598 WDR97A6NE52 1622 aa34.09■■■■□ 3.05
APLP2-204ENST00000345598 RUSC2Q8N2Y8 1516 aa34■■■■□ 3.03
APLP2-204ENST00000345598 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
APLP2-204ENST00000345598 KIF27Q86VH2 1401 aa33.98■■■■□ 3.03
APLP2-204ENST00000345598 FAM9AQ8IZU1 332 aaPredicted RBP33.98■■■■□ 3.03
APLP2-204ENST00000345598 GAPVD1Q14C86 1478 aa33.97■■■■□ 3.03
APLP2-204ENST00000345598 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
APLP2-204ENST00000345598 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
APLP2-204ENST00000345598 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
APLP2-204ENST00000345598 IGF1RP08069 1367 aa33.78■■■■□ 3
APLP2-204ENST00000345598 CSRNP3Q8WYN3 585 aa33.73■■■□□ 2.99
APLP2-204ENST00000345598 SNAPC4Q5SXM2 1469 aa33.73■■■□□ 2.99
APLP2-204ENST00000345598 ERICH3Q5RHP9 1530 aa33.73■■■□□ 2.99
APLP2-204ENST00000345598 EEA1Q15075 1411 aa33.71■■■□□ 2.99
APLP2-204ENST00000345598 FBLN2P98095 1184 aa33.7■■■□□ 2.99
APLP2-204ENST00000345598 MAGI1Q96QZ7 1491 aaPredicted RBP33.63■■■□□ 2.97
APLP2-204ENST00000345598 CARMIL1Q5VZK9 1371 aa33.61■■■□□ 2.97
APLP2-204ENST00000345598 CHMP7Q8WUX9 453 aaPredicted RBP33.61■■■□□ 2.97
APLP2-204ENST00000345598 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
APLP2-204ENST00000345598 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
APLP2-204ENST00000345598 CUL7Q14999 1698 aa33.56■■■□□ 2.96
APLP2-204ENST00000345598 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
APLP2-204ENST00000345598 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
APLP2-204ENST00000345598 CHD1O14646 1710 aa33.48■■■□□ 2.95
APLP2-204ENST00000345598 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
APLP2-204ENST00000345598 RAPGEF2Q9Y4G8 1499 aa33.45■■■□□ 2.95
APLP2-204ENST00000345598 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
APLP2-204ENST00000345598 KIF21BO75037 1637 aa33.32■■■□□ 2.93
APLP2-204ENST00000345598 OSCARQ8IYS5 282 aa33.31■■■□□ 2.92
APLP2-204ENST00000345598 LOC105371045A0A1W2PR82 267 aa33.31■■■□□ 2.92
APLP2-204ENST00000345598 UBTFP17480 764 aaKnown RBP33.29■■■□□ 2.92
APLP2-204ENST00000345598 GOLGA3Q08378 1498 aa33.24■■■□□ 2.91
APLP2-204ENST00000345598 CEP170Q5SW79 1584 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms