RNA–Protein interactions for RNA: ENST00000372560.3

PPCS-202, Transcript of phosphopantothenoylcysteine synthetase, humanhuman

TSL 1 (best) BASIC

Gene PPCS, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCS-202ENST00000372560 NISCHQ9Y2I1 1504 aa52.15■■■■■ 5.94
PPCS-202ENST00000372560 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
PPCS-202ENST00000372560 ABCC9O60706 1549 aa45.54■■■■■ 4.88
PPCS-202ENST00000372560 DCAF8L2P0C7V8 631 aa43.83■■■■■ 4.61
PPCS-202ENST00000372560 RB1CC1Q8TDY2 1594 aa43.65■■■■■ 4.58
PPCS-202ENST00000372560 NACADO15069 1562 aa43.58■■■■■ 4.57
PPCS-202ENST00000372560 ZCCHC6Q5VYS8 1495 aaKnown RBP43.4■■■■■ 4.54
PPCS-202ENST00000372560 MYO15BQ96JP2 1530 aa43.24■■■■■ 4.51
PPCS-202ENST00000372560 DCAF1Q9Y4B6 1507 aa43.06■■■■■ 4.48
PPCS-202ENST00000372560 PABPN1Q86U42 306 aaKnown RBP eCLIP42.65■■■■■ 4.42
PPCS-202ENST00000372560 UNC13AQ9UPW8 1703 aa42.56■■■■■ 4.4
PPCS-202ENST00000372560 SCRIBQ14160 1630 aa42.35■■■■■ 4.37
PPCS-202ENST00000372560 BICRAQ9NZM4 1560 aa42.35■■■■■ 4.37
PPCS-202ENST00000372560 DNAJC5BQ9UF47 199 aa41.92■■■■■ 4.3
PPCS-202ENST00000372560 SHROOM4Q9ULL8 1493 aa41.8■■■■■ 4.28
PPCS-202ENST00000372560 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
PPCS-202ENST00000372560 CC2D2AQ9P2K1 1620 aa41.09■■■■■ 4.17
PPCS-202ENST00000372560 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
PPCS-202ENST00000372560 SMARCA4P51532 1647 aa40.44■■■■■ 4.06
PPCS-202ENST00000372560 BAZ1AQ9NRL2 1556 aaPredicted RBP40.39■■■■■ 4.06
PPCS-202ENST00000372560 ATAD2BQ9ULI0 1458 aa40.3■■■■■ 4.04
PPCS-202ENST00000372560 NCAPD3P42695 1498 aa40.26■■■■■ 4.03
PPCS-202ENST00000372560 MROH2BQ7Z745 1585 aa40.23■■■■■ 4.03
PPCS-202ENST00000372560 SMARCA2P51531 1590 aa40.18■■■■■ 4.02
PPCS-202ENST00000372560 PEG3Q9GZU2 1588 aa39.99■■■■□ 3.99
PPCS-202ENST00000372560 HMGXB3Q12766 1538 aa39.99■■■■□ 3.99
PPCS-202ENST00000372560 BAZ1BQ9UIG0 1483 aaKnown RBP39.96■■■■□ 3.99
PPCS-202ENST00000372560 RSF1Q96T23 1441 aaPredicted RBP39.77■■■■□ 3.96
PPCS-202ENST00000372560 WIZO95785 1651 aa39.76■■■■□ 3.96
PPCS-202ENST00000372560 NESP48681 1621 aa39.38■■■■□ 3.89
PPCS-202ENST00000372560 TOP2AP11388 1531 aaKnown RBP39.31■■■■□ 3.88
PPCS-202ENST00000372560 ERCC6Q03468 1493 aa39.24■■■■□ 3.87
PPCS-202ENST00000372560 LAMC3Q9Y6N6 1575 aa39.15■■■■□ 3.86
PPCS-202ENST00000372560 CADPSQ9ULU8 1353 aa39.13■■■■□ 3.85
PPCS-202ENST00000372560 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
PPCS-202ENST00000372560 CCDC88BA6NC98 1476 aa38.92■■■■□ 3.82
PPCS-202ENST00000372560 SUPT5HO00267 1087 aaKnown RBP38.87■■■■□ 3.81
PPCS-202ENST00000372560 CFTRP13569 1480 aa38.85■■■■□ 3.81
PPCS-202ENST00000372560 KIF21AQ7Z4S6 1674 aa38.78■■■■□ 3.8
PPCS-202ENST00000372560 CUX2O14529 1486 aa38.75■■■■□ 3.79
PPCS-202ENST00000372560 FANCD2Q9BXW9 1451 aa38.67■■■■□ 3.78
PPCS-202ENST00000372560 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
PPCS-202ENST00000372560 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
PPCS-202ENST00000372560 MRC2Q9UBG0 1479 aa38.56■■■■□ 3.76
PPCS-202ENST00000372560 WDR62O43379 1518 aa38.39■■■■□ 3.74
PPCS-202ENST00000372560 PRDM2Q13029 1718 aa38.35■■■■□ 3.73
PPCS-202ENST00000372560 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
PPCS-202ENST00000372560 TOPBP1Q92547 1522 aa38.02■■■■□ 3.68
PPCS-202ENST00000372560 ABCC8Q09428 1581 aa37.97■■■■□ 3.67
PPCS-202ENST00000372560 DNMBPQ6XZF7 1577 aa37.93■■■■□ 3.66
PPCS-202ENST00000372560 IFT140Q96RY7 1462 aa37.8■■■■□ 3.64
PPCS-202ENST00000372560 DNAJC5Q9H3Z4 198 aa37.75■■■■□ 3.63
PPCS-202ENST00000372560 CUX1P39880 1505 aa37.73■■■■□ 3.63
PPCS-202ENST00000372560 POLA1P09884 1462 aaPredicted RBP37.71■■■■□ 3.63
PPCS-202ENST00000372560 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
PPCS-202ENST00000372560 FGD5Q6ZNL6 1462 aa37.62■■■■□ 3.61
PPCS-202ENST00000372560 RAD54L2Q9Y4B4 1467 aa37.61■■■■□ 3.61
PPCS-202ENST00000372560 SOGA1O94964 1423 aa37.61■■■■□ 3.61
PPCS-202ENST00000372560 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
PPCS-202ENST00000372560 WRNQ14191 1432 aaPredicted RBP eCLIP37.49■■■■□ 3.59
PPCS-202ENST00000372560 AQRO60306 1485 aaKnown RBP eCLIP37.49■■■■□ 3.59
PPCS-202ENST00000372560 TDRD9Q8NDG6 1382 aaKnown RBP37.44■■■■□ 3.58
PPCS-202ENST00000372560 EIF4G3O43432 1585 aaKnown RBP37.44■■■■□ 3.58
PPCS-202ENST00000372560 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
PPCS-202ENST00000372560 TOP2BQ02880 1626 aa37.33■■■■□ 3.57
PPCS-202ENST00000372560 BIVM-ERCC5R4GMW8 1640 aa37.29■■■■□ 3.56
PPCS-202ENST00000372560 OSCARQ8IYS5 282 aa37.26■■■■□ 3.56
PPCS-202ENST00000372560 ABCA10Q8WWZ4 1543 aa37.21■■■■□ 3.55
PPCS-202ENST00000372560 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
PPCS-202ENST00000372560 FBLN2P98095 1184 aa37.14■■■■□ 3.54
PPCS-202ENST00000372560 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.54
PPCS-202ENST00000372560 GRIN2BQ13224 1484 aa37.13■■■■□ 3.53
PPCS-202ENST00000372560 SNAPC4Q5SXM2 1469 aa37.1■■■■□ 3.53
PPCS-202ENST00000372560 ABCA5Q8WWZ7 1642 aa37.03■■■■□ 3.52
PPCS-202ENST00000372560 MAGI1Q96QZ7 1491 aaPredicted RBP36.99■■■■□ 3.51
PPCS-202ENST00000372560 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
PPCS-202ENST00000372560 CHD1O14646 1710 aa36.95■■■■□ 3.51
PPCS-202ENST00000372560 PBRM1Q86U86 1689 aa36.94■■■■□ 3.5
PPCS-202ENST00000372560 SYNJ2O15056 1496 aa36.88■■■■□ 3.49
PPCS-202ENST00000372560 ERICH3Q5RHP9 1530 aa36.74■■■■□ 3.47
PPCS-202ENST00000372560 KIF27Q86VH2 1401 aa36.71■■■■□ 3.47
PPCS-202ENST00000372560 FHAD1B1AJZ9 1412 aa36.7■■■■□ 3.47
PPCS-202ENST00000372560 ADAMTS12P58397 1594 aa36.7■■■■□ 3.46
PPCS-202ENST00000372560 TRIM41Q8WV44 630 aa36.66■■■■□ 3.46
PPCS-202ENST00000372560 GRIN2AQ12879 1464 aa36.64■■■■□ 3.46
PPCS-202ENST00000372560 IGF1RP08069 1367 aa36.61■■■■□ 3.45
PPCS-202ENST00000372560 CLASP1Q7Z460 1538 aa36.59■■■■□ 3.45
PPCS-202ENST00000372560 ARHGEF11O15085 1522 aa36.58■■■■□ 3.45
PPCS-202ENST00000372560 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
PPCS-202ENST00000372560 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
PPCS-202ENST00000372560 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
PPCS-202ENST00000372560 NUP160Q12769 1436 aa36.47■■■■□ 3.43
PPCS-202ENST00000372560 CEP170Q5SW79 1584 aa36.45■■■■□ 3.43
PPCS-202ENST00000372560 RUSC2Q8N2Y8 1516 aa36.42■■■■□ 3.42
PPCS-202ENST00000372560 CYB5RLQ6IPT4 315 aa36.38■■■■□ 3.41
PPCS-202ENST00000372560 CARMIL1Q5VZK9 1371 aa36.38■■■■□ 3.41
PPCS-202ENST00000372560 CUL7Q14999 1698 aa36.35■■■■□ 3.41
PPCS-202ENST00000372560 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
PPCS-202ENST00000372560 JPH4Q96JJ6 628 aa36.19■■■■□ 3.38
PPCS-202ENST00000372560 CHIC1Q5VXU3 224 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms