RNA–Protein interactions for RNA: ENST00000289382.7

CNOT11-201, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT11, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-201ENST00000289382 NISCHQ9Y2I1 1504 aa37.76■■■■□ 3.64
CNOT11-201ENST00000289382 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
CNOT11-201ENST00000289382 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.71
CNOT11-201ENST00000289382 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
CNOT11-201ENST00000289382 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
CNOT11-201ENST00000289382 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
CNOT11-201ENST00000289382 HRCP23327 699 aa31.63■■■□□ 2.65
CNOT11-201ENST00000289382 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
CNOT11-201ENST00000289382 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
CNOT11-201ENST00000289382 PCGF6Q9BYE7 350 aa31■■■□□ 2.55
CNOT11-201ENST00000289382 PPARGC1BQ86YN6 1023 aaKnown RBP30.92■■■□□ 2.54
CNOT11-201ENST00000289382 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
CNOT11-201ENST00000289382 PELP1Q8IZL8 1130 aaKnown RBP30.32■■■□□ 2.44
CNOT11-201ENST00000289382 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
CNOT11-201ENST00000289382 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
CNOT11-201ENST00000289382 ABCC9O60706 1549 aa30.11■■■□□ 2.41
CNOT11-201ENST00000289382 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
CNOT11-201ENST00000289382 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
CNOT11-201ENST00000289382 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
CNOT11-201ENST00000289382 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
CNOT11-201ENST00000289382 RB1CC1Q8TDY2 1594 aa29.74■■■□□ 2.35
CNOT11-201ENST00000289382 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
CNOT11-201ENST00000289382 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
CNOT11-201ENST00000289382 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
CNOT11-201ENST00000289382 EHMT2Q96KQ7 1210 aa29.59■■■□□ 2.33
CNOT11-201ENST00000289382 NACADO15069 1562 aa29.5■■■□□ 2.31
CNOT11-201ENST00000289382 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
CNOT11-201ENST00000289382 WIZO95785 1651 aa29.35■■■□□ 2.29
CNOT11-201ENST00000289382 ACIN1Q9UKV3 1341 aaKnown RBP29.15■■■□□ 2.26
CNOT11-201ENST00000289382 MYT1Q01538 1121 aa29.09■■■□□ 2.25
CNOT11-201ENST00000289382 NEUROD1Q13562 356 aa29.06■■■□□ 2.24
CNOT11-201ENST00000289382 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
CNOT11-201ENST00000289382 GTF3C3Q9Y5Q9 886 aa28.88■■■□□ 2.21
CNOT11-201ENST00000289382 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
CNOT11-201ENST00000289382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
CNOT11-201ENST00000289382 CENPBP07199 599 aaPredicted RBP28.8■■■□□ 2.2
CNOT11-201ENST00000289382 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
CNOT11-201ENST00000289382 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
CNOT11-201ENST00000289382 PABPN1Q86U42 306 aaKnown RBP eCLIP28.76■■■□□ 2.19
CNOT11-201ENST00000289382 CCDC88BA6NC98 1476 aa28.74■■■□□ 2.19
CNOT11-201ENST00000289382 SMARCA4P51532 1647 aa28.74■■■□□ 2.19
CNOT11-201ENST00000289382 CCER1Q8TC90 406 aaPredicted RBP28.73■■■□□ 2.19
CNOT11-201ENST00000289382 DIEXFQ68CQ4 756 aaKnown RBP28.71■■■□□ 2.19
CNOT11-201ENST00000289382 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
CNOT11-201ENST00000289382 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
CNOT11-201ENST00000289382 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
CNOT11-201ENST00000289382 SOGA1O94964 1423 aa28.54■■■□□ 2.16
CNOT11-201ENST00000289382 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
CNOT11-201ENST00000289382 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
CNOT11-201ENST00000289382 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
CNOT11-201ENST00000289382 CSRNP3Q8WYN3 585 aa28.28■■■□□ 2.12
CNOT11-201ENST00000289382 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
CNOT11-201ENST00000289382 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
CNOT11-201ENST00000289382 ZNF316A6NFI3 1004 aaPredicted RBP28.2■■■□□ 2.1
CNOT11-201ENST00000289382 YTHDC1Q96MU7 727 aaKnown RBP28.2■■■□□ 2.1
CNOT11-201ENST00000289382 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
CNOT11-201ENST00000289382 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
CNOT11-201ENST00000289382 PEG3Q9GZU2 1588 aa28.05■■■□□ 2.08
CNOT11-201ENST00000289382 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
CNOT11-201ENST00000289382 EEA1Q15075 1411 aa28.01■■■□□ 2.07
CNOT11-201ENST00000289382 GOLGA3Q08378 1498 aa27.98■■■□□ 2.07
CNOT11-201ENST00000289382 MIER1Q8N108 512 aa27.98■■■□□ 2.07
CNOT11-201ENST00000289382 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
CNOT11-201ENST00000289382 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
CNOT11-201ENST00000289382 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
CNOT11-201ENST00000289382 RAPGEF2Q9Y4G8 1499 aa27.78■■■□□ 2.04
CNOT11-201ENST00000289382 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
CNOT11-201ENST00000289382 CLIP1P30622 1438 aa27.76■■■□□ 2.03
CNOT11-201ENST00000289382 KIF21BO75037 1637 aa27.71■■■□□ 2.03
CNOT11-201ENST00000289382 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
CNOT11-201ENST00000289382 TOP2BQ02880 1626 aa27.57■■■□□ 2
CNOT11-201ENST00000289382 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
CNOT11-201ENST00000289382 SUPT16HQ9Y5B9 1047 aaKnown RBP27.55■■■□□ 2
CNOT11-201ENST00000289382 APLP2Q06481 763 aa27.5■■□□□ 1.99
CNOT11-201ENST00000289382 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
CNOT11-201ENST00000289382 CUX1P39880 1505 aa27.41■■□□□ 1.98
CNOT11-201ENST00000289382 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
CNOT11-201ENST00000289382 ANP32EQ9BTT0 268 aa27.39■■□□□ 1.98
CNOT11-201ENST00000289382 TSHZ2Q9NRE2 1034 aa27.39■■□□□ 1.98
CNOT11-201ENST00000289382 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
CNOT11-201ENST00000289382 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
CNOT11-201ENST00000289382 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
CNOT11-201ENST00000289382 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
CNOT11-201ENST00000289382 CFTRP13569 1480 aa27.23■■□□□ 1.95
CNOT11-201ENST00000289382 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
CNOT11-201ENST00000289382 BCL11AQ9H165 835 aa27.23■■□□□ 1.95
CNOT11-201ENST00000289382 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
CNOT11-201ENST00000289382 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.94
CNOT11-201ENST00000289382 ITGAEP38570 1179 aa27.08■■□□□ 1.93
CNOT11-201ENST00000289382 ARHGAP35Q9NRY4 1499 aa27.08■■□□□ 1.93
CNOT11-201ENST00000289382 CUX2O14529 1486 aa27.05■■□□□ 1.92
CNOT11-201ENST00000289382 IGF1RP08069 1367 aa27.02■■□□□ 1.92
CNOT11-201ENST00000289382 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
CNOT11-201ENST00000289382 BCANQ96GW7 911 aa26.94■■□□□ 1.9
CNOT11-201ENST00000289382 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
CNOT11-201ENST00000289382 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
CNOT11-201ENST00000289382 FGD5Q6ZNL6 1462 aa26.91■■□□□ 1.9
CNOT11-201ENST00000289382 KCNH8Q96L42 1107 aa26.9■■□□□ 1.9
CNOT11-201ENST00000289382 CARMIL1Q5VZK9 1371 aa26.88■■□□□ 1.89
CNOT11-201ENST00000289382 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms