Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.03■□□□□ 0.32
ALX4Q9H161 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX4Q9H161 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX4Q9H161 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX4Q9H161 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ALX4Q9H161 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.03■□□□□ 0.32
ALX4Q9H161 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX4Q9H161 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ALX4Q9H161 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX4Q9H161 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ALX4Q9H161 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX4Q9H161 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.02■□□□□ 0.32
ALX4Q9H161 AP005435.1-201ENST00000529293 1178 ntBASIC17.02■□□□□ 0.32
ALX4Q9H161 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.02■□□□□ 0.32
ALX4Q9H161 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
ALX4Q9H161 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.02■□□□□ 0.31
ALX4Q9H161 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALX4Q9H161 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ALX4Q9H161 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ALX4Q9H161 TSPY26P-201ENST00000476365 1326 ntBASIC17.01■□□□□ 0.31
ALX4Q9H161 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.01■□□□□ 0.31
ALX4Q9H161 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.01■□□□□ 0.31
ALX4Q9H161 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
ALX4Q9H161 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.01■□□□□ 0.31
ALX4Q9H161 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ALX4Q9H161 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ALX4Q9H161 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
ALX4Q9H161 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 TREX1-205ENST00000625293 1783 ntBASIC17.01■□□□□ 0.31
ALX4Q9H161 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALX4Q9H161 NEFHP1-201ENST00000412845 2629 ntBASIC17■□□□□ 0.31
ALX4Q9H161 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
ALX4Q9H161 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ALX4Q9H161 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 MIR935-201ENST00000401179 91 ntBASIC17■□□□□ 0.31
ALX4Q9H161 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17■□□□□ 0.31
ALX4Q9H161 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17■□□□□ 0.31
ALX4Q9H161 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ALX4Q9H161 MPST-208ENST00000628507 698 ntTSL 5 BASIC17■□□□□ 0.31
ALX4Q9H161 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17■□□□□ 0.31
ALX4Q9H161 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ALX4Q9H161 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.99■□□□□ 0.31
ALX4Q9H161 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ALX4Q9H161 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ALX4Q9H161 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms