RNA–Protein interactions for RNA: ENST00000008440.9

SPRTN-201, Transcript of SprT-like N-terminal domain, humanhuman

TSL 2 BASIC

Gene SPRTN, Length 1,667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-201ENST00000008440 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
SPRTN-201ENST00000008440 CCDC180Q9P1Z9 1646 aa44.68■■■■■ 4.74
SPRTN-201ENST00000008440 ABCC9O60706 1549 aa43.11■■■■■ 4.49
SPRTN-201ENST00000008440 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
SPRTN-201ENST00000008440 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
SPRTN-201ENST00000008440 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
SPRTN-201ENST00000008440 NACADO15069 1562 aa41.8■■■■■ 4.28
SPRTN-201ENST00000008440 RB1CC1Q8TDY2 1594 aa41.7■■■■■ 4.27
SPRTN-201ENST00000008440 MYO15BQ96JP2 1530 aa41.7■■■■■ 4.27
SPRTN-201ENST00000008440 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
SPRTN-201ENST00000008440 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
SPRTN-201ENST00000008440 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
SPRTN-201ENST00000008440 BICRAQ9NZM4 1560 aa40.47■■■■■ 4.07
SPRTN-201ENST00000008440 PABPN1Q86U42 306 aaKnown RBP eCLIP40.42■■■■■ 4.06
SPRTN-201ENST00000008440 CECR2Q9BXF3 1484 aa39.41■■■■□ 3.9
SPRTN-201ENST00000008440 EIF4G1Q04637 1599 aaKnown RBP39.33■■■■□ 3.89
SPRTN-201ENST00000008440 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
SPRTN-201ENST00000008440 SMARCA4P51532 1647 aa39.16■■■■□ 3.86
SPRTN-201ENST00000008440 MROH2BQ7Z745 1585 aa39.07■■■■□ 3.84
SPRTN-201ENST00000008440 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
SPRTN-201ENST00000008440 DNAJC5BQ9UF47 199 aa38.93■■■■□ 3.82
SPRTN-201ENST00000008440 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
SPRTN-201ENST00000008440 WIZO95785 1651 aa38.75■■■■□ 3.79
SPRTN-201ENST00000008440 ATAD2BQ9ULI0 1458 aa38.72■■■■□ 3.79
SPRTN-201ENST00000008440 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
SPRTN-201ENST00000008440 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
SPRTN-201ENST00000008440 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
SPRTN-201ENST00000008440 SUPT5HO00267 1087 aaKnown RBP38.51■■■■□ 3.76
SPRTN-201ENST00000008440 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
SPRTN-201ENST00000008440 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
SPRTN-201ENST00000008440 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
SPRTN-201ENST00000008440 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
SPRTN-201ENST00000008440 NESP48681 1621 aa37.54■■■■□ 3.6
SPRTN-201ENST00000008440 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
SPRTN-201ENST00000008440 LAMC3Q9Y6N6 1575 aa37.45■■■■□ 3.59
SPRTN-201ENST00000008440 CFTRP13569 1480 aa37.41■■■■□ 3.58
SPRTN-201ENST00000008440 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
SPRTN-201ENST00000008440 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
SPRTN-201ENST00000008440 PDS5BQ9NTI5 1447 aa37.15■■■■□ 3.54
SPRTN-201ENST00000008440 FANCD2Q9BXW9 1451 aa37.09■■■■□ 3.53
SPRTN-201ENST00000008440 ERCC6Q03468 1493 aa37.06■■■■□ 3.52
SPRTN-201ENST00000008440 CEP164Q9UPV0 1460 aa36.97■■■■□ 3.51
SPRTN-201ENST00000008440 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
SPRTN-201ENST00000008440 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
SPRTN-201ENST00000008440 MRC2Q9UBG0 1479 aa36.75■■■■□ 3.47
SPRTN-201ENST00000008440 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.46
SPRTN-201ENST00000008440 WDR62O43379 1518 aa36.61■■■■□ 3.45
SPRTN-201ENST00000008440 CUX1P39880 1505 aa36.6■■■■□ 3.45
SPRTN-201ENST00000008440 DNMBPQ6XZF7 1577 aa36.6■■■■□ 3.45
SPRTN-201ENST00000008440 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
SPRTN-201ENST00000008440 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
SPRTN-201ENST00000008440 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
SPRTN-201ENST00000008440 BIVM-ERCC5R4GMW8 1640 aa36.47■■■■□ 3.43
SPRTN-201ENST00000008440 TOP2BQ02880 1626 aa36.46■■■■□ 3.43
SPRTN-201ENST00000008440 FGD5Q6ZNL6 1462 aa36.35■■■■□ 3.41
SPRTN-201ENST00000008440 POLA1P09884 1462 aaPredicted RBP36.33■■■■□ 3.41
SPRTN-201ENST00000008440 CUX2O14529 1486 aa36.32■■■■□ 3.4
SPRTN-201ENST00000008440 CHIC1Q5VXU3 224 aa36.29■■■■□ 3.4
SPRTN-201ENST00000008440 TRIM41Q8WV44 630 aa36.26■■■■□ 3.4
SPRTN-201ENST00000008440 RAD54L2Q9Y4B4 1467 aa36.2■■■■□ 3.39
SPRTN-201ENST00000008440 SOGA1O94964 1423 aa36.17■■■■□ 3.38
SPRTN-201ENST00000008440 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
SPRTN-201ENST00000008440 IFT140Q96RY7 1462 aa36.12■■■■□ 3.37
SPRTN-201ENST00000008440 WDR97A6NE52 1622 aa36.06■■■■□ 3.36
SPRTN-201ENST00000008440 ZNF608Q9ULD9 1512 aaPredicted RBP36■■■■□ 3.35
SPRTN-201ENST00000008440 ABCA10Q8WWZ4 1543 aa35.99■■■■□ 3.35
SPRTN-201ENST00000008440 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
SPRTN-201ENST00000008440 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
SPRTN-201ENST00000008440 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.33
SPRTN-201ENST00000008440 ABCA5Q8WWZ7 1642 aa35.83■■■■□ 3.33
SPRTN-201ENST00000008440 GAPVD1Q14C86 1478 aa35.77■■■■□ 3.32
SPRTN-201ENST00000008440 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
SPRTN-201ENST00000008440 PBRM1Q86U86 1689 aa35.76■■■■□ 3.32
SPRTN-201ENST00000008440 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
SPRTN-201ENST00000008440 GRIN2BQ13224 1484 aa35.64■■■■□ 3.3
SPRTN-201ENST00000008440 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
SPRTN-201ENST00000008440 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.28
SPRTN-201ENST00000008440 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
SPRTN-201ENST00000008440 IGF1RP08069 1367 aa35.52■■■■□ 3.28
SPRTN-201ENST00000008440 EEA1Q15075 1411 aa35.49■■■■□ 3.27
SPRTN-201ENST00000008440 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
SPRTN-201ENST00000008440 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
SPRTN-201ENST00000008440 CUL7Q14999 1698 aa35.43■■■■□ 3.26
SPRTN-201ENST00000008440 CSRNP3Q8WYN3 585 aa35.41■■■■□ 3.26
SPRTN-201ENST00000008440 CHD1O14646 1710 aa35.38■■■■□ 3.25
SPRTN-201ENST00000008440 FBLN2P98095 1184 aa35.35■■■■□ 3.25
SPRTN-201ENST00000008440 FHAD1B1AJZ9 1412 aa35.35■■■■□ 3.25
SPRTN-201ENST00000008440 CARMIL1Q5VZK9 1371 aa35.34■■■■□ 3.25
SPRTN-201ENST00000008440 SYNJ2O15056 1496 aa35.33■■■■□ 3.25
SPRTN-201ENST00000008440 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
SPRTN-201ENST00000008440 PRXQ9BXM0 1461 aa35.25■■■■□ 3.23
SPRTN-201ENST00000008440 GRIN2AQ12879 1464 aa35.22■■■■□ 3.23
SPRTN-201ENST00000008440 RAPGEF2Q9Y4G8 1499 aa35.21■■■■□ 3.23
SPRTN-201ENST00000008440 EHMT2Q96KQ7 1210 aa35.17■■■■□ 3.22
SPRTN-201ENST00000008440 KIF21BO75037 1637 aa35.16■■■■□ 3.22
SPRTN-201ENST00000008440 CEP170Q5SW79 1584 aa35.06■■■■□ 3.2
SPRTN-201ENST00000008440 OSCARQ8IYS5 282 aa35■■■■□ 3.19
SPRTN-201ENST00000008440 GOLGA3Q08378 1498 aa34.99■■■■□ 3.19
SPRTN-201ENST00000008440 NUP160Q12769 1436 aa34.99■■■■□ 3.19
SPRTN-201ENST00000008440 CTTNBP2Q8WZ74 1663 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms