RNA–Protein interactions for RNA: ENST00000372207.3

BEST4-201, Transcript of bestrophin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST4, Length 2,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4-201ENST00000372207 NISCHQ9Y2I1 1504 aa44.2■■■■■ 4.67
BEST4-201ENST00000372207 CCDC180Q9P1Z9 1646 aa38.22■■■■□ 3.71
BEST4-201ENST00000372207 ZCCHC6Q5VYS8 1495 aaKnown RBP37.16■■■■□ 3.54
BEST4-201ENST00000372207 DCAF8L2P0C7V8 631 aa36.66■■■■□ 3.46
BEST4-201ENST00000372207 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
BEST4-201ENST00000372207 SHROOM4Q9ULL8 1493 aa36.44■■■■□ 3.42
BEST4-201ENST00000372207 ABCC9O60706 1549 aa36.16■■■■□ 3.38
BEST4-201ENST00000372207 MYO15BQ96JP2 1530 aa35.92■■■■□ 3.34
BEST4-201ENST00000372207 NACADO15069 1562 aa35.64■■■■□ 3.3
BEST4-201ENST00000372207 SCRIBQ14160 1630 aa35.36■■■■□ 3.25
BEST4-201ENST00000372207 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
BEST4-201ENST00000372207 SUPT5HO00267 1087 aaKnown RBP35.23■■■■□ 3.23
BEST4-201ENST00000372207 UNC13AQ9UPW8 1703 aa34.48■■■■□ 3.11
BEST4-201ENST00000372207 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
BEST4-201ENST00000372207 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
BEST4-201ENST00000372207 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
BEST4-201ENST00000372207 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
BEST4-201ENST00000372207 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
BEST4-201ENST00000372207 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.04
BEST4-201ENST00000372207 WIZO95785 1651 aa33.87■■■■□ 3.01
BEST4-201ENST00000372207 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
BEST4-201ENST00000372207 CHIC1Q5VXU3 224 aa33.82■■■■□ 3.01
BEST4-201ENST00000372207 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.95
BEST4-201ENST00000372207 PEG3Q9GZU2 1588 aa33.42■■■□□ 2.94
BEST4-201ENST00000372207 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.93
BEST4-201ENST00000372207 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
BEST4-201ENST00000372207 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
BEST4-201ENST00000372207 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.9
BEST4-201ENST00000372207 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
BEST4-201ENST00000372207 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
BEST4-201ENST00000372207 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
BEST4-201ENST00000372207 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
BEST4-201ENST00000372207 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
BEST4-201ENST00000372207 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
BEST4-201ENST00000372207 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
BEST4-201ENST00000372207 FAM9AQ8IZU1 332 aaPredicted RBP32.53■■■□□ 2.8
BEST4-201ENST00000372207 WRNQ14191 1432 aaPredicted RBP eCLIP32.42■■■□□ 2.78
BEST4-201ENST00000372207 CFTRP13569 1480 aa32.33■■■□□ 2.77
BEST4-201ENST00000372207 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
BEST4-201ENST00000372207 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
BEST4-201ENST00000372207 SOGA1O94964 1423 aa32.16■■■□□ 2.74
BEST4-201ENST00000372207 EHMT2Q96KQ7 1210 aa32.11■■■□□ 2.73
BEST4-201ENST00000372207 EEA1Q15075 1411 aa32.03■■■□□ 2.72
BEST4-201ENST00000372207 TOP2BQ02880 1626 aa32.03■■■□□ 2.72
BEST4-201ENST00000372207 RUSC2Q8N2Y8 1516 aa32.02■■■□□ 2.72
BEST4-201ENST00000372207 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
BEST4-201ENST00000372207 CSRNP3Q8WYN3 585 aa31.97■■■□□ 2.71
BEST4-201ENST00000372207 CUX1P39880 1505 aa31.93■■■□□ 2.7
BEST4-201ENST00000372207 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
BEST4-201ENST00000372207 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
BEST4-201ENST00000372207 NESP48681 1621 aa31.83■■■□□ 2.69
BEST4-201ENST00000372207 FANCD2Q9BXW9 1451 aa31.82■■■□□ 2.68
BEST4-201ENST00000372207 LAMC3Q9Y6N6 1575 aa31.72■■■□□ 2.67
BEST4-201ENST00000372207 GOLGA3Q08378 1498 aa31.63■■■□□ 2.65
BEST4-201ENST00000372207 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
BEST4-201ENST00000372207 UBTFP17480 764 aaKnown RBP31.63■■■□□ 2.65
BEST4-201ENST00000372207 CEP164Q9UPV0 1460 aa31.61■■■□□ 2.65
BEST4-201ENST00000372207 KIF27Q86VH2 1401 aa31.57■■■□□ 2.64
BEST4-201ENST00000372207 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
BEST4-201ENST00000372207 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
BEST4-201ENST00000372207 KIF21BO75037 1637 aa31.55■■■□□ 2.64
BEST4-201ENST00000372207 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
BEST4-201ENST00000372207 CEP162Q5TB80 1403 aa31.49■■■□□ 2.63
BEST4-201ENST00000372207 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
BEST4-201ENST00000372207 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
BEST4-201ENST00000372207 CUX2O14529 1486 aa31.43■■■□□ 2.62
BEST4-201ENST00000372207 PRXQ9BXM0 1461 aa31.42■■■□□ 2.62
BEST4-201ENST00000372207 PCGF6Q9BYE7 350 aa31.41■■■□□ 2.62
BEST4-201ENST00000372207 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
BEST4-201ENST00000372207 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
BEST4-201ENST00000372207 IGF1RP08069 1367 aa31.32■■■□□ 2.6
BEST4-201ENST00000372207 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
BEST4-201ENST00000372207 ERICH3Q5RHP9 1530 aa31.31■■■□□ 2.6
BEST4-201ENST00000372207 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
BEST4-201ENST00000372207 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.59
BEST4-201ENST00000372207 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
BEST4-201ENST00000372207 CLIP1P30622 1438 aa31.19■■■□□ 2.58
BEST4-201ENST00000372207 CARMIL1Q5VZK9 1371 aa31.15■■■□□ 2.58
BEST4-201ENST00000372207 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
BEST4-201ENST00000372207 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
BEST4-201ENST00000372207 PPARGC1BQ86YN6 1023 aaKnown RBP31.09■■■□□ 2.57
BEST4-201ENST00000372207 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
BEST4-201ENST00000372207 WDR97A6NE52 1622 aa30.99■■■□□ 2.55
BEST4-201ENST00000372207 ERCC6Q03468 1493 aa30.95■■■□□ 2.55
BEST4-201ENST00000372207 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
BEST4-201ENST00000372207 TARBP1Q13395 1621 aaKnown RBP30.93■■■□□ 2.54
BEST4-201ENST00000372207 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
BEST4-201ENST00000372207 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
BEST4-201ENST00000372207 WDR62O43379 1518 aa30.9■■■□□ 2.54
BEST4-201ENST00000372207 CUL7Q14999 1698 aa30.85■■■□□ 2.53
BEST4-201ENST00000372207 ARAP1Q96P48 1450 aa30.81■■■□□ 2.52
BEST4-201ENST00000372207 TTBK1Q5TCY1 1321 aaPredicted RBP30.78■■■□□ 2.52
BEST4-201ENST00000372207 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
BEST4-201ENST00000372207 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.52
BEST4-201ENST00000372207 ARHGAP35Q9NRY4 1499 aa30.77■■■□□ 2.52
BEST4-201ENST00000372207 APLP2Q06481 763 aa30.71■■■□□ 2.51
BEST4-201ENST00000372207 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.51
BEST4-201ENST00000372207 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
BEST4-201ENST00000372207 HRCP23327 699 aa30.66■■■□□ 2.5
BEST4-201ENST00000372207 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms