RNA–Protein interactions for RNA: ENST00000621286.1

MADCAM1-208, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-208ENST00000621286 NISCHQ9Y2I1 1504 aa53.16■■■■■ 6.1
MADCAM1-208ENST00000621286 CCDC180Q9P1Z9 1646 aa47.28■■■■■ 5.16
MADCAM1-208ENST00000621286 ABCC9O60706 1549 aa46.6■■■■■ 5.05
MADCAM1-208ENST00000621286 DCAF8L2P0C7V8 631 aa44.82■■■■■ 4.77
MADCAM1-208ENST00000621286 RB1CC1Q8TDY2 1594 aa44.69■■■■■ 4.74
MADCAM1-208ENST00000621286 NACADO15069 1562 aa44.56■■■■■ 4.72
MADCAM1-208ENST00000621286 ZCCHC6Q5VYS8 1495 aaKnown RBP44.18■■■■■ 4.66
MADCAM1-208ENST00000621286 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
MADCAM1-208ENST00000621286 DCAF1Q9Y4B6 1507 aa43.9■■■■■ 4.62
MADCAM1-208ENST00000621286 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
MADCAM1-208ENST00000621286 PABPN1Q86U42 306 aaKnown RBP eCLIP43.59■■■■■ 4.57
MADCAM1-208ENST00000621286 BICRAQ9NZM4 1560 aa43.29■■■■■ 4.52
MADCAM1-208ENST00000621286 SCRIBQ14160 1630 aa43.22■■■■■ 4.51
MADCAM1-208ENST00000621286 DNAJC5BQ9UF47 199 aa43.21■■■■■ 4.51
MADCAM1-208ENST00000621286 SHROOM4Q9ULL8 1493 aa42.76■■■■■ 4.44
MADCAM1-208ENST00000621286 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
MADCAM1-208ENST00000621286 CC2D2AQ9P2K1 1620 aa42.08■■■■■ 4.33
MADCAM1-208ENST00000621286 CECR2Q9BXF3 1484 aa41.87■■■■■ 4.29
MADCAM1-208ENST00000621286 SMARCA4P51532 1647 aa41.26■■■■■ 4.2
MADCAM1-208ENST00000621286 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
MADCAM1-208ENST00000621286 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
MADCAM1-208ENST00000621286 NCAPD3P42695 1498 aa41.12■■■■■ 4.17
MADCAM1-208ENST00000621286 SMARCA2P51531 1590 aa41.07■■■■■ 4.16
MADCAM1-208ENST00000621286 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
MADCAM1-208ENST00000621286 HMGXB3Q12766 1538 aa40.85■■■■■ 4.13
MADCAM1-208ENST00000621286 BAZ1BQ9UIG0 1483 aaKnown RBP40.82■■■■■ 4.12
MADCAM1-208ENST00000621286 PEG3Q9GZU2 1588 aa40.81■■■■■ 4.12
MADCAM1-208ENST00000621286 WIZO95785 1651 aa40.53■■■■■ 4.08
MADCAM1-208ENST00000621286 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
MADCAM1-208ENST00000621286 ERCC6Q03468 1493 aa40.22■■■■■ 4.03
MADCAM1-208ENST00000621286 NESP48681 1621 aa40.22■■■■■ 4.03
MADCAM1-208ENST00000621286 LAMC3Q9Y6N6 1575 aa40.07■■■■■ 4.01
MADCAM1-208ENST00000621286 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
MADCAM1-208ENST00000621286 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
MADCAM1-208ENST00000621286 PDS5BQ9NTI5 1447 aa39.89■■■■□ 3.98
MADCAM1-208ENST00000621286 CUX2O14529 1486 aa39.75■■■■□ 3.95
MADCAM1-208ENST00000621286 KIF21AQ7Z4S6 1674 aa39.7■■■■□ 3.95
MADCAM1-208ENST00000621286 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
MADCAM1-208ENST00000621286 CFTRP13569 1480 aa39.63■■■■□ 3.94
MADCAM1-208ENST00000621286 THOC2Q8NI27 1593 aaKnown RBP39.56■■■■□ 3.92
MADCAM1-208ENST00000621286 SUPT5HO00267 1087 aaKnown RBP39.51■■■■□ 3.92
MADCAM1-208ENST00000621286 FANCD2Q9BXW9 1451 aa39.5■■■■□ 3.91
MADCAM1-208ENST00000621286 CEP164Q9UPV0 1460 aa39.47■■■■□ 3.91
MADCAM1-208ENST00000621286 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
MADCAM1-208ENST00000621286 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
MADCAM1-208ENST00000621286 WDR62O43379 1518 aa39.24■■■■□ 3.87
MADCAM1-208ENST00000621286 URB2Q14146 1524 aaKnown RBP39.07■■■■□ 3.84
MADCAM1-208ENST00000621286 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
MADCAM1-208ENST00000621286 ABCC8Q09428 1581 aa38.86■■■■□ 3.81
MADCAM1-208ENST00000621286 TOPBP1Q92547 1522 aa38.83■■■■□ 3.81
MADCAM1-208ENST00000621286 DNMBPQ6XZF7 1577 aa38.74■■■■□ 3.79
MADCAM1-208ENST00000621286 IFT140Q96RY7 1462 aa38.65■■■■□ 3.78
MADCAM1-208ENST00000621286 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
MADCAM1-208ENST00000621286 POLA1P09884 1462 aaPredicted RBP38.47■■■■□ 3.75
MADCAM1-208ENST00000621286 CUX1P39880 1505 aa38.43■■■■□ 3.74
MADCAM1-208ENST00000621286 SOGA1O94964 1423 aa38.41■■■■□ 3.74
MADCAM1-208ENST00000621286 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
MADCAM1-208ENST00000621286 TARBP1Q13395 1621 aaKnown RBP38.36■■■■□ 3.73
MADCAM1-208ENST00000621286 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
MADCAM1-208ENST00000621286 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
MADCAM1-208ENST00000621286 EIF4G3O43432 1585 aaKnown RBP38.27■■■■□ 3.72
MADCAM1-208ENST00000621286 OSCARQ8IYS5 282 aa38.25■■■■□ 3.71
MADCAM1-208ENST00000621286 TDRD9Q8NDG6 1382 aaKnown RBP38.21■■■■□ 3.71
MADCAM1-208ENST00000621286 WRNQ14191 1432 aaPredicted RBP eCLIP38.19■■■■□ 3.7
MADCAM1-208ENST00000621286 TOP2BQ02880 1626 aa38.05■■■■□ 3.68
MADCAM1-208ENST00000621286 FBLN2P98095 1184 aa38.04■■■■□ 3.68
MADCAM1-208ENST00000621286 WDR97A6NE52 1622 aa38.03■■■■□ 3.68
MADCAM1-208ENST00000621286 SYNJ1O43426 1573 aa38.02■■■■□ 3.68
MADCAM1-208ENST00000621286 BIVM-ERCC5R4GMW8 1640 aa38.02■■■■□ 3.68
MADCAM1-208ENST00000621286 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
MADCAM1-208ENST00000621286 GRIN2BQ13224 1484 aa37.93■■■■□ 3.66
MADCAM1-208ENST00000621286 GAPVD1Q14C86 1478 aa37.91■■■■□ 3.66
MADCAM1-208ENST00000621286 SNAPC4Q5SXM2 1469 aa37.89■■■■□ 3.66
MADCAM1-208ENST00000621286 CHMP7Q8WUX9 453 aaPredicted RBP37.86■■■■□ 3.65
MADCAM1-208ENST00000621286 CHD1O14646 1710 aa37.85■■■■□ 3.65
MADCAM1-208ENST00000621286 MAGI1Q96QZ7 1491 aaPredicted RBP37.82■■■■□ 3.64
MADCAM1-208ENST00000621286 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
MADCAM1-208ENST00000621286 ABCA5Q8WWZ7 1642 aa37.77■■■■□ 3.64
MADCAM1-208ENST00000621286 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
MADCAM1-208ENST00000621286 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
MADCAM1-208ENST00000621286 ERICH3Q5RHP9 1530 aa37.51■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
MADCAM1-208ENST00000621286 FHAD1B1AJZ9 1412 aa37.46■■■■□ 3.59
MADCAM1-208ENST00000621286 ADAMTS12P58397 1594 aa37.44■■■■□ 3.58
MADCAM1-208ENST00000621286 KIF27Q86VH2 1401 aa37.43■■■■□ 3.58
MADCAM1-208ENST00000621286 GRIN2AQ12879 1464 aa37.41■■■■□ 3.58
MADCAM1-208ENST00000621286 CLASP1Q7Z460 1538 aa37.39■■■■□ 3.58
MADCAM1-208ENST00000621286 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
MADCAM1-208ENST00000621286 IGF1RP08069 1367 aa37.29■■■■□ 3.56
MADCAM1-208ENST00000621286 NUP160Q12769 1436 aa37.21■■■■□ 3.55
MADCAM1-208ENST00000621286 CEP170Q5SW79 1584 aa37.2■■■■□ 3.55
MADCAM1-208ENST00000621286 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
MADCAM1-208ENST00000621286 CUL7Q14999 1698 aa37.13■■■■□ 3.53
MADCAM1-208ENST00000621286 CARMIL1Q5VZK9 1371 aa37.09■■■■□ 3.53
MADCAM1-208ENST00000621286 JPH4Q96JJ6 628 aa37.01■■■■□ 3.52
MADCAM1-208ENST00000621286 RUSC2Q8N2Y8 1516 aa37■■■■□ 3.51
MADCAM1-208ENST00000621286 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms