Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.022e-9■■■■□ 19.5
SUB1P53999 CUTA-208ENST00000482684 837 ntTSL 1 (best)15.97■□□□□ 0.155e-8■■■■□ 19.5
SUB1P53999 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.445e-8■■■■□ 19.5
SUB1P53999 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.555e-8■■■■□ 19.5
SUB1P53999 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.715e-8■■■■□ 19.5
SUB1P53999 CUTA-201ENST00000374484 658 ntTSL 310.22□□□□□ -0.775e-8■■■■□ 19.5
SUB1P53999 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC10.22□□□□□ -0.775e-8■■■■□ 19.5
SUB1P53999 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.865e-8■■■■□ 19.5
SUB1P53999 CUTA-206ENST00000465956 961 ntTSL 29.15□□□□□ -0.945e-8■■■■□ 19.5
SUB1P53999 CUTA-209ENST00000487637 1378 ntTSL 28.83□□□□□ -15e-8■■■■□ 19.5
SUB1P53999 CUTA-205ENST00000462802 1054 ntTSL 1 (best)8.66□□□□□ -1.025e-8■■■■□ 19.5
SUB1P53999 CUTA-211ENST00000488478 676 ntTSL 5 BASIC8.11□□□□□ -1.115e-8■■■■□ 19.5
SUB1P53999 CUTA-213ENST00000494751 731 ntTSL 5 BASIC7.87□□□□□ -1.155e-8■■■■□ 19.5
SUB1P53999 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.235e-8■■■■□ 19.5
SUB1P53999 CUTA-207ENST00000479249 562 ntTSL 35.35□□□□□ -1.555e-8■■■■□ 19.5
SUB1P53999 ANAPC7-211ENST00000552087 910 ntTSL 511.58□□□□□ -0.561e-6■■■■□ 19.4
SUB1P53999 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.741e-6■■■■□ 19.4
SUB1P53999 ANAPC7-206ENST00000481473 1836 ntTSL 1 (best)10.05□□□□□ -0.81e-6■■■■□ 19.4
SUB1P53999 PI4KA-202ENST00000399213 1636 ntTSL 512.45□□□□□ -0.424e-7■■■■□ 19.4
SUB1P53999 PI4KA-207ENST00000466772 3109 ntTSL 211.19□□□□□ -0.624e-7■■■■□ 19.4
SUB1P53999 PI4KA-209ENST00000477245 3026 ntTSL 1 (best)10.45□□□□□ -0.744e-7■■■■□ 19.4
SUB1P53999 PI4KA-217ENST00000492581 3925 ntTSL 29.87□□□□□ -0.834e-7■■■■□ 19.4
SUB1P53999 DHRS2-204ENST00000553600 844 ntTSL 211.52□□□□□ -0.577e-14■■■■□ 19.4
SUB1P53999 EIF3I-201ENST00000355082 564 ntTSL 310.89□□□□□ -0.671e-7■■■■□ 19.4
SUB1P53999 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC6.74□□□□□ -1.332e-9■■■■□ 19.3
SUB1P53999 NOP53-207ENST00000598681 1358 ntTSL 517.23■□□□□ 0.351e-20■■■■□ 19.3
SUB1P53999 LAMA5-210ENST00000491036 728 ntTSL 211.89□□□□□ -0.512e-6■■■■□ 19.3
SUB1P53999 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)10.64□□□□□ -0.712e-6■■■■□ 19.3
SUB1P53999 YDJC-205ENST00000468686 1423 ntTSL 1 (best)16.13■□□□□ 0.171e-9■■■■□ 19.3
SUB1P53999 YDJC-207ENST00000482998 1388 ntTSL 515.24■□□□□ 0.031e-9■■■■□ 19.3
SUB1P53999 YDJC-204ENST00000464015 1613 ntTSL 1 (best)14.99□□□□□ -0.011e-9■■■■□ 19.3
SUB1P53999 YDJC-206ENST00000473985 1494 ntTSL 514.68□□□□□ -0.061e-9■■■■□ 19.3
SUB1P53999 YDJC-203ENST00000415762 1410 ntTSL 1 (best)13.96□□□□□ -0.181e-9■■■■□ 19.3
SUB1P53999 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.4□□□□□ -0.261e-9■■■■□ 19.3
SUB1P53999 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.341e-9■■■■□ 19.3
SUB1P53999 NPM1-212ENST00000524204 640 ntTSL 23.94□□□□□ -1.782e-12■■■■□ 19.3
SUB1P53999 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.113e-9■■■■□ 19.3
SUB1P53999 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.113e-9■■■■□ 19.3
SUB1P53999 CTDSP2-202ENST00000547169 1340 ntTSL 212.03□□□□□ -0.483e-9■■■■□ 19.3
SUB1P53999 CTDSP2-205ENST00000549039 797 ntTSL 28.87□□□□□ -0.993e-9■■■■□ 19.3
SUB1P53999 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.03■□□□□ -08e-8■■■■□ 19.3
SUB1P53999 SDHC-206ENST00000470743 832 ntTSL 56.38□□□□□ -1.398e-8■■■■□ 19.3
SUB1P53999 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.648e-8■■■■□ 19.3
SUB1P53999 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.286e-7■■■■□ 19.3
SUB1P53999 DIMT1-204ENST00000514605 635 ntTSL 22.85□□□□□ -1.956e-7■■■■□ 19.3
SUB1P53999 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■■■□ 19.3
SUB1P53999 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC9.12□□□□□ -0.952e-6■■■■□ 19.3
SUB1P53999 LRRC75A-AS1-203ENST00000472367 794 ntTSL 313.56□□□□□ -0.243e-23■■■■□ 19.3
SUB1P53999 LRRC75A-AS1-212ENST00000483588 688 ntTSL 313.28□□□□□ -0.283e-23■■■■□ 19.3
SUB1P53999 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.76□□□□□ -0.693e-23■■■■□ 19.3
SUB1P53999 LRRC75A-AS1-207ENST00000478103 712 ntTSL 37.73□□□□□ -1.173e-23■■■■□ 19.3
SUB1P53999 LRRC75A-AS1-211ENST00000483140 936 ntTSL 24.31□□□□□ -1.723e-23■■■■□ 19.3
SUB1P53999 MYL6-215ENST00000549566 685 ntTSL 2 BASIC9.62□□□□□ -0.873e-7■■■■□ 19.3
SUB1P53999 EPCAM-206ENST00000490733 752 ntTSL 33.76□□□□□ -1.817e-11■■■□□ 19.2
SUB1P53999 EMC4-205ENST00000558102 543 ntTSL 211.91□□□□□ -0.53e-7■■■□□ 19.2
SUB1P53999 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.78□□□□□ -0.683e-7■■■□□ 19.2
SUB1P53999 EMC4-206ENST00000558205 1006 ntTSL 210.62□□□□□ -0.713e-7■■■□□ 19.2
SUB1P53999 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.62□□□□□ -0.713e-7■■■□□ 19.2
SUB1P53999 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.363e-7■■■□□ 19.2
SUB1P53999 VCP-207ENST00000493886 2942 ntTSL 211.04□□□□□ -0.648e-9■■■□□ 19.2
SUB1P53999 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.99□□□□□ -0.333e-8■■■□□ 19.2
SUB1P53999 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.76□□□□□ -0.373e-8■■■□□ 19.2
SUB1P53999 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC9.71□□□□□ -0.864e-6■■■□□ 19.2
SUB1P53999 FLNB-210ENST00000481470 6497 ntTSL 1 (best)9.31□□□□□ -0.924e-6■■■□□ 19.2
SUB1P53999 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.532e-6■■■□□ 19.2
SUB1P53999 TMEM14C-204ENST00000495549 479 ntTSL 29.1□□□□□ -0.955e-8■■■□□ 19.2
SUB1P53999 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.59e-8■■■□□ 19.1
SUB1P53999 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.439e-8■■■□□ 19.1
SUB1P53999 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.599e-8■■■□□ 19.1
SUB1P53999 CD63-209ENST00000550050 829 ntTSL 511.37□□□□□ -0.599e-8■■■□□ 19.1
SUB1P53999 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.739e-8■■■□□ 19.1
SUB1P53999 CD63-215ENST00000552754 682 ntTSL 1 (best) BASIC8.96□□□□□ -0.989e-8■■■□□ 19.1
SUB1P53999 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.211e-10■■■□□ 19.1
SUB1P53999 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.943e-7■■■□□ 19.1
SUB1P53999 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.2■□□□□ 0.187e-7■■■□□ 19.1
SUB1P53999 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.117e-7■■■□□ 19.1
SUB1P53999 VRK1-206ENST00000557222 1029 ntTSL 56.27□□□□□ -1.416e-12■■■□□ 19.1
SUB1P53999 VRK1-203ENST00000555067 604 ntTSL 33.99□□□□□ -1.776e-12■■■□□ 19.1
SUB1P53999 VRK1-205ENST00000555402 415 ntTSL 33.71□□□□□ -1.826e-12■■■□□ 19.1
SUB1P53999 CAPZA1-202ENST00000466066 765 ntTSL 27.58□□□□□ -1.25e-17■■■□□ 19.1
SUB1P53999 BIRC5-206ENST00000589892 747 ntTSL 210.66□□□□□ -0.78e-26■■■□□ 19.1
SUB1P53999 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.491e-6■■■□□ 19.1
SUB1P53999 HNRNPA1-212ENST00000551679 359 ntTSL 24.22□□□□□ -1.732e-72■■■□□ 19.1
SUB1P53999 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.399e-8■■■□□ 19.1
SUB1P53999 SLC20A1-207ENST00000490674 3202 ntTSL 1 (best)4.31□□□□□ -1.729e-8■■■□□ 19.1
SUB1P53999 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.16■□□□□ 0.027e-8■■■□□ 19.1
SUB1P53999 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.34□□□□□ -0.437e-8■■■□□ 19.1
SUB1P53999 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.94□□□□□ -0.57e-8■■■□□ 19.1
SUB1P53999 SMARCA4-212ENST00000586985 534 ntTSL 511.12□□□□□ -0.637e-8■■■□□ 19.1
SUB1P53999 SMARCA4-208ENST00000585799 3842 ntTSL 210.26□□□□□ -0.777e-8■■■□□ 19.1
SUB1P53999 SMARCA4-217ENST00000591595 3377 ntTSL 29.58□□□□□ -0.887e-8■■■□□ 19.1
SUB1P53999 SMARCA4-211ENST00000586921 569 ntTSL 58.55□□□□□ -1.047e-8■■■□□ 19.1
SUB1P53999 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.432e-7■■■□□ 19
SUB1P53999 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.79□□□□□ -1.648e-25■■■□□ 19
SUB1P53999 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.728e-25■■■□□ 19
SUB1P53999 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.34□□□□□ -1.878e-25■■■□□ 19
SUB1P53999 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.64e-8■■■□□ 19
SUB1P53999 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.878e-7■■■□□ 19
SUB1P53999 CAT-205ENST00000534710 1020 ntTSL 1 (best)8.85□□□□□ -0.998e-7■■■□□ 19
SUB1P53999 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.221e-7■■■□□ 19
Retrieved 100 of 11,644 protein–RNA pairs in 185.4 ms