RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
SMARCA4-211ENST00000586921 ABCC9O60706 1549 aa31.38■■■□□ 2.61
SMARCA4-211ENST00000586921 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
SMARCA4-211ENST00000586921 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
SMARCA4-211ENST00000586921 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
SMARCA4-211ENST00000586921 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
SMARCA4-211ENST00000586921 NACADO15069 1562 aa28.89■■■□□ 2.22
SMARCA4-211ENST00000586921 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
SMARCA4-211ENST00000586921 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
SMARCA4-211ENST00000586921 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
SMARCA4-211ENST00000586921 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
SMARCA4-211ENST00000586921 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
SMARCA4-211ENST00000586921 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
SMARCA4-211ENST00000586921 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
SMARCA4-211ENST00000586921 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
SMARCA4-211ENST00000586921 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
SMARCA4-211ENST00000586921 SCRIBQ14160 1630 aa27.54■■■□□ 2
SMARCA4-211ENST00000586921 CUX2O14529 1486 aa27.51■■■□□ 2
SMARCA4-211ENST00000586921 DCAF1Q9Y4B6 1507 aa27.33■■□□□ 1.97
SMARCA4-211ENST00000586921 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
SMARCA4-211ENST00000586921 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
SMARCA4-211ENST00000586921 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
SMARCA4-211ENST00000586921 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
SMARCA4-211ENST00000586921 NESP48681 1621 aa26.63■■□□□ 1.85
SMARCA4-211ENST00000586921 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
SMARCA4-211ENST00000586921 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
SMARCA4-211ENST00000586921 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
SMARCA4-211ENST00000586921 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
SMARCA4-211ENST00000586921 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.79
SMARCA4-211ENST00000586921 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
SMARCA4-211ENST00000586921 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
SMARCA4-211ENST00000586921 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
SMARCA4-211ENST00000586921 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
SMARCA4-211ENST00000586921 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
SMARCA4-211ENST00000586921 OSCARQ8IYS5 282 aa26.05■■□□□ 1.76
SMARCA4-211ENST00000586921 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
SMARCA4-211ENST00000586921 WDR62O43379 1518 aa25.98■■□□□ 1.75
SMARCA4-211ENST00000586921 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
SMARCA4-211ENST00000586921 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
SMARCA4-211ENST00000586921 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
SMARCA4-211ENST00000586921 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
SMARCA4-211ENST00000586921 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
SMARCA4-211ENST00000586921 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
SMARCA4-211ENST00000586921 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
SMARCA4-211ENST00000586921 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
SMARCA4-211ENST00000586921 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
SMARCA4-211ENST00000586921 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
SMARCA4-211ENST00000586921 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
SMARCA4-211ENST00000586921 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
SMARCA4-211ENST00000586921 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
SMARCA4-211ENST00000586921 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
SMARCA4-211ENST00000586921 CFTRP13569 1480 aa25.29■■□□□ 1.64
SMARCA4-211ENST00000586921 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
SMARCA4-211ENST00000586921 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SMARCA4-211ENST00000586921 WIZO95785 1651 aa25.2■■□□□ 1.62
SMARCA4-211ENST00000586921 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
SMARCA4-211ENST00000586921 CHD1O14646 1710 aa25.1■■□□□ 1.61
SMARCA4-211ENST00000586921 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
SMARCA4-211ENST00000586921 FBLN2P98095 1184 aa24.99■■□□□ 1.59
SMARCA4-211ENST00000586921 PRDM2Q13029 1718 aa24.95■■□□□ 1.58
SMARCA4-211ENST00000586921 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
SMARCA4-211ENST00000586921 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.58
SMARCA4-211ENST00000586921 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
SMARCA4-211ENST00000586921 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
SMARCA4-211ENST00000586921 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
SMARCA4-211ENST00000586921 TARBP1Q13395 1621 aaKnown RBP24.78■■□□□ 1.56
SMARCA4-211ENST00000586921 ILDR1Q86SU0 546 aaPredicted RBP24.76■■□□□ 1.55
SMARCA4-211ENST00000586921 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
SMARCA4-211ENST00000586921 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
SMARCA4-211ENST00000586921 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
SMARCA4-211ENST00000586921 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
SMARCA4-211ENST00000586921 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
SMARCA4-211ENST00000586921 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
SMARCA4-211ENST00000586921 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SMARCA4-211ENST00000586921 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
SMARCA4-211ENST00000586921 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
SMARCA4-211ENST00000586921 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
SMARCA4-211ENST00000586921 SOGA1O94964 1423 aa24.47■■□□□ 1.51
SMARCA4-211ENST00000586921 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
SMARCA4-211ENST00000586921 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
SMARCA4-211ENST00000586921 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
SMARCA4-211ENST00000586921 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
SMARCA4-211ENST00000586921 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
SMARCA4-211ENST00000586921 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
SMARCA4-211ENST00000586921 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
SMARCA4-211ENST00000586921 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
SMARCA4-211ENST00000586921 CEP170Q5SW79 1584 aa24.17■■□□□ 1.46
SMARCA4-211ENST00000586921 FAM69CQ0P6D2 419 aa24.13■■□□□ 1.45
SMARCA4-211ENST00000586921 KDM6BO15054 1643 aa24.11■■□□□ 1.45
SMARCA4-211ENST00000586921 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
SMARCA4-211ENST00000586921 CUX1P39880 1505 aa24.09■■□□□ 1.45
SMARCA4-211ENST00000586921 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
SMARCA4-211ENST00000586921 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
SMARCA4-211ENST00000586921 NUP160Q12769 1436 aa24.03■■□□□ 1.44
SMARCA4-211ENST00000586921 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
SMARCA4-211ENST00000586921 DIP2BQ9P265 1576 aa24■■□□□ 1.43
SMARCA4-211ENST00000586921 MAPKBP1O60336 1514 aa23.96■■□□□ 1.43
SMARCA4-211ENST00000586921 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
SMARCA4-211ENST00000586921 HECW2Q9P2P5 1572 aa23.95■■□□□ 1.42
SMARCA4-211ENST00000586921 NPM1P06748 294 aaKnown RBP eCLIP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms