RNA–Protein interactions for RNA: ENST00000300403.10

TPX2-201, Transcript of TPX2, microtubule nucleation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPX2, Length 3,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-201ENST00000300403 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
TPX2-201ENST00000300403 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
TPX2-201ENST00000300403 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
TPX2-201ENST00000300403 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
TPX2-201ENST00000300403 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
TPX2-201ENST00000300403 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
TPX2-201ENST00000300403 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
TPX2-201ENST00000300403 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
TPX2-201ENST00000300403 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.88
TPX2-201ENST00000300403 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
TPX2-201ENST00000300403 ABCC9O60706 1549 aa20.18■□□□□ 0.82
TPX2-201ENST00000300403 LOC105371045A0A1W2PR82 267 aa20.12■□□□□ 0.81
TPX2-201ENST00000300403 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.81
TPX2-201ENST00000300403 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
TPX2-201ENST00000300403 HRCP23327 699 aa19.94■□□□□ 0.78
TPX2-201ENST00000300403 NACADO15069 1562 aa19.92■□□□□ 0.78
TPX2-201ENST00000300403 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
TPX2-201ENST00000300403 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
TPX2-201ENST00000300403 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
TPX2-201ENST00000300403 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
TPX2-201ENST00000300403 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
TPX2-201ENST00000300403 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
TPX2-201ENST00000300403 WIZO95785 1651 aa19.62■□□□□ 0.73
TPX2-201ENST00000300403 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
TPX2-201ENST00000300403 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
TPX2-201ENST00000300403 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
TPX2-201ENST00000300403 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
TPX2-201ENST00000300403 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
TPX2-201ENST00000300403 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
TPX2-201ENST00000300403 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
TPX2-201ENST00000300403 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
TPX2-201ENST00000300403 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
TPX2-201ENST00000300403 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
TPX2-201ENST00000300403 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
TPX2-201ENST00000300403 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
TPX2-201ENST00000300403 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.64
TPX2-201ENST00000300403 SOGA1O94964 1423 aa19.05■□□□□ 0.64
TPX2-201ENST00000300403 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
TPX2-201ENST00000300403 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
TPX2-201ENST00000300403 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
TPX2-201ENST00000300403 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
TPX2-201ENST00000300403 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
TPX2-201ENST00000300403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
TPX2-201ENST00000300403 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
TPX2-201ENST00000300403 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
TPX2-201ENST00000300403 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
TPX2-201ENST00000300403 EEA1Q15075 1411 aa18.86■□□□□ 0.61
TPX2-201ENST00000300403 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
TPX2-201ENST00000300403 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
TPX2-201ENST00000300403 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
TPX2-201ENST00000300403 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
TPX2-201ENST00000300403 SYNJ1O43426 1573 aa18.76■□□□□ 0.59
TPX2-201ENST00000300403 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
TPX2-201ENST00000300403 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
TPX2-201ENST00000300403 CLIP1P30622 1438 aa18.61■□□□□ 0.57
TPX2-201ENST00000300403 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
TPX2-201ENST00000300403 KIF21BO75037 1637 aa18.57■□□□□ 0.56
TPX2-201ENST00000300403 APLP2Q06481 763 aa18.54■□□□□ 0.56
TPX2-201ENST00000300403 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
TPX2-201ENST00000300403 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
TPX2-201ENST00000300403 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
TPX2-201ENST00000300403 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
TPX2-201ENST00000300403 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
TPX2-201ENST00000300403 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
TPX2-201ENST00000300403 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
TPX2-201ENST00000300403 CUX1P39880 1505 aa18.37■□□□□ 0.53
TPX2-201ENST00000300403 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
TPX2-201ENST00000300403 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
TPX2-201ENST00000300403 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
TPX2-201ENST00000300403 CFTRP13569 1480 aa18.32■□□□□ 0.52
TPX2-201ENST00000300403 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
TPX2-201ENST00000300403 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
TPX2-201ENST00000300403 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
TPX2-201ENST00000300403 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
TPX2-201ENST00000300403 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
TPX2-201ENST00000300403 ACIN1Q9UKV3 1341 aaKnown RBP18.2■□□□□ 0.5
TPX2-201ENST00000300403 CUX2O14529 1486 aa18.18■□□□□ 0.5
TPX2-201ENST00000300403 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
TPX2-201ENST00000300403 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
TPX2-201ENST00000300403 IGF1RP08069 1367 aa18.12■□□□□ 0.49
TPX2-201ENST00000300403 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
TPX2-201ENST00000300403 ITGAEP38570 1179 aa18.11■□□□□ 0.49
TPX2-201ENST00000300403 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
TPX2-201ENST00000300403 FGD5Q6ZNL6 1462 aa18.08■□□□□ 0.49
TPX2-201ENST00000300403 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
TPX2-201ENST00000300403 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
TPX2-201ENST00000300403 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
TPX2-201ENST00000300403 MIER1Q8N108 512 aa18.04■□□□□ 0.48
TPX2-201ENST00000300403 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
TPX2-201ENST00000300403 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
TPX2-201ENST00000300403 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
TPX2-201ENST00000300403 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.47
TPX2-201ENST00000300403 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
TPX2-201ENST00000300403 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
TPX2-201ENST00000300403 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
TPX2-201ENST00000300403 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
TPX2-201ENST00000300403 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
TPX2-201ENST00000300403 NESP48681 1621 aa17.92■□□□□ 0.46
TPX2-201ENST00000300403 FAM50AQ14320 339 aaKnown RBP17.89■□□□□ 0.46
TPX2-201ENST00000300403 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms