RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
EPCAM-206ENST00000490733 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
EPCAM-206ENST00000490733 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
EPCAM-206ENST00000490733 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
EPCAM-206ENST00000490733 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
EPCAM-206ENST00000490733 FOXD1Q16676 465 aa15.4■□□□□ 0.06
EPCAM-206ENST00000490733 MSH5O43196 834 aa14.96□□□□□ -0.01
EPCAM-206ENST00000490733 PIAS4Q8N2W9 510 aaPredicted RBP14.19□□□□□ -0.14
EPCAM-206ENST00000490733 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
EPCAM-206ENST00000490733 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
EPCAM-206ENST00000490733 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
EPCAM-206ENST00000490733 ADRA2BP18089 450 aa13.41□□□□□ -0.26
EPCAM-206ENST00000490733 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
EPCAM-206ENST00000490733 POTEHQ6S545 545 aa12.68□□□□□ -0.38
EPCAM-206ENST00000490733 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
EPCAM-206ENST00000490733 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
EPCAM-206ENST00000490733 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
EPCAM-206ENST00000490733 SCAF1Q9H7N4 1312 aaKnown RBP12.42□□□□□ -0.42
EPCAM-206ENST00000490733 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
EPCAM-206ENST00000490733 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
EPCAM-206ENST00000490733 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
EPCAM-206ENST00000490733 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
EPCAM-206ENST00000490733 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
EPCAM-206ENST00000490733 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
EPCAM-206ENST00000490733 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
EPCAM-206ENST00000490733 KCNA4P22459 653 aa11.63□□□□□ -0.55
EPCAM-206ENST00000490733 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
EPCAM-206ENST00000490733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
EPCAM-206ENST00000490733 DSG3P32926 999 aa11.4□□□□□ -0.58
EPCAM-206ENST00000490733 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
EPCAM-206ENST00000490733 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
EPCAM-206ENST00000490733 CAPN15O75808 1086 aa11.28□□□□□ -0.6
EPCAM-206ENST00000490733 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
EPCAM-206ENST00000490733 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
EPCAM-206ENST00000490733 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
EPCAM-206ENST00000490733 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
EPCAM-206ENST00000490733 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
EPCAM-206ENST00000490733 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
EPCAM-206ENST00000490733 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
EPCAM-206ENST00000490733 ABCB7O75027 752 aa10.86□□□□□ -0.67
EPCAM-206ENST00000490733 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
EPCAM-206ENST00000490733 HAX1O00165 279 aa10.8□□□□□ -0.68
EPCAM-206ENST00000490733 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
EPCAM-206ENST00000490733 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
EPCAM-206ENST00000490733 APLP2Q06481 763 aa10.73□□□□□ -0.69
EPCAM-206ENST00000490733 ZBTB22O15209 634 aa10.71□□□□□ -0.69
EPCAM-206ENST00000490733 MYCNP04198 464 aaPredicted RBP10.7□□□□□ -0.7
EPCAM-206ENST00000490733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
EPCAM-206ENST00000490733 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
EPCAM-206ENST00000490733 LHX8Q68G74 356 aa10.65□□□□□ -0.7
EPCAM-206ENST00000490733 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
EPCAM-206ENST00000490733 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
EPCAM-206ENST00000490733 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
EPCAM-206ENST00000490733 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
EPCAM-206ENST00000490733 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
EPCAM-206ENST00000490733 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
EPCAM-206ENST00000490733 EVX2Q03828 476 aa10.44□□□□□ -0.74
EPCAM-206ENST00000490733 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
EPCAM-206ENST00000490733 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
EPCAM-206ENST00000490733 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
EPCAM-206ENST00000490733 POLA2Q14181 598 aa10.34□□□□□ -0.75
EPCAM-206ENST00000490733 PITPNM1O00562 1244 aa10.24□□□□□ -0.77
EPCAM-206ENST00000490733 GABBR2O75899 941 aa10.22□□□□□ -0.77
EPCAM-206ENST00000490733 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
EPCAM-206ENST00000490733 POTEMA6NI47 508 aa10.1□□□□□ -0.79
EPCAM-206ENST00000490733 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
EPCAM-206ENST00000490733 PCDH10Q9P2E7 1040 aa10.05□□□□□ -0.8
EPCAM-206ENST00000490733 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
EPCAM-206ENST00000490733 CCDC180Q9P1Z9 1646 aa10.01□□□□□ -0.81
EPCAM-206ENST00000490733 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
EPCAM-206ENST00000490733 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
EPCAM-206ENST00000490733 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
EPCAM-206ENST00000490733 FBLN2P98095 1184 aa9.99□□□□□ -0.81
EPCAM-206ENST00000490733 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
EPCAM-206ENST00000490733 SPDYE2BA6NHP3 402 aa9.84□□□□□ -0.83
EPCAM-206ENST00000490733 SPDYE6P0CI01 402 aa9.84□□□□□ -0.83
EPCAM-206ENST00000490733 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
EPCAM-206ENST00000490733 OTUD5Q96G74 571 aa9.81□□□□□ -0.84
EPCAM-206ENST00000490733 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
EPCAM-206ENST00000490733 CLCN6P51797 869 aa9.78□□□□□ -0.84
EPCAM-206ENST00000490733 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
EPCAM-206ENST00000490733 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
EPCAM-206ENST00000490733 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
EPCAM-206ENST00000490733 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
EPCAM-206ENST00000490733 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
EPCAM-206ENST00000490733 SPDYE4A6NLX3 237 aa9.64□□□□□ -0.87
EPCAM-206ENST00000490733 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
EPCAM-206ENST00000490733 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
EPCAM-206ENST00000490733 POTEB2H3BUK9 544 aa9.57□□□□□ -0.88
EPCAM-206ENST00000490733 ZCCHC6Q5VYS8 1495 aaKnown RBP9.55□□□□□ -0.88
EPCAM-206ENST00000490733 ABCC9O60706 1549 aa9.55□□□□□ -0.88
EPCAM-206ENST00000490733 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
EPCAM-206ENST00000490733 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
EPCAM-206ENST00000490733 PROM2Q8N271 834 aa9.46□□□□□ -0.9
EPCAM-206ENST00000490733 FKBP8Q14318 412 aa9.45□□□□□ -0.9
EPCAM-206ENST00000490733 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
EPCAM-206ENST00000490733 DCAF1Q9Y4B6 1507 aa9.42□□□□□ -0.9
EPCAM-206ENST00000490733 MAMSTRQ6ZN01 415 aa9.42□□□□□ -0.9
EPCAM-206ENST00000490733 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
EPCAM-206ENST00000490733 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms