RNA–Protein interactions for RNA: ENST00000249209.8

EMC4-201, Transcript of ER membrane protein complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene EMC4, Length 852 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC4-201ENST00000249209 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.61
EMC4-201ENST00000249209 ABCC9O60706 1549 aa33.91■■■■□ 3.02
EMC4-201ENST00000249209 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
EMC4-201ENST00000249209 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
EMC4-201ENST00000249209 NACADO15069 1562 aa31.97■■■□□ 2.71
EMC4-201ENST00000249209 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
EMC4-201ENST00000249209 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
EMC4-201ENST00000249209 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
EMC4-201ENST00000249209 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
EMC4-201ENST00000249209 MYO15BQ96JP2 1530 aa31.47■■■□□ 2.63
EMC4-201ENST00000249209 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
EMC4-201ENST00000249209 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
EMC4-201ENST00000249209 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
EMC4-201ENST00000249209 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
EMC4-201ENST00000249209 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
EMC4-201ENST00000249209 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
EMC4-201ENST00000249209 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
EMC4-201ENST00000249209 CECR2Q9BXF3 1484 aa30.53■■■□□ 2.48
EMC4-201ENST00000249209 AEBP2Q6ZN18 517 aaPredicted RBP30.33■■■□□ 2.45
EMC4-201ENST00000249209 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
EMC4-201ENST00000249209 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
EMC4-201ENST00000249209 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
EMC4-201ENST00000249209 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
EMC4-201ENST00000249209 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
EMC4-201ENST00000249209 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
EMC4-201ENST00000249209 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
EMC4-201ENST00000249209 CUX2O14529 1486 aa29.22■■■□□ 2.27
EMC4-201ENST00000249209 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
EMC4-201ENST00000249209 NESP48681 1621 aa29.13■■■□□ 2.25
EMC4-201ENST00000249209 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
EMC4-201ENST00000249209 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
EMC4-201ENST00000249209 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
EMC4-201ENST00000249209 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
EMC4-201ENST00000249209 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
EMC4-201ENST00000249209 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
EMC4-201ENST00000249209 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
EMC4-201ENST00000249209 WIZO95785 1651 aa28.71■■■□□ 2.19
EMC4-201ENST00000249209 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
EMC4-201ENST00000249209 CADPSQ9ULU8 1353 aa28.6■■■□□ 2.17
EMC4-201ENST00000249209 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
EMC4-201ENST00000249209 WDR62O43379 1518 aa28.4■■■□□ 2.14
EMC4-201ENST00000249209 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
EMC4-201ENST00000249209 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
EMC4-201ENST00000249209 FANCD2Q9BXW9 1451 aa28.28■■■□□ 2.12
EMC4-201ENST00000249209 CFTRP13569 1480 aa28.27■■■□□ 2.12
EMC4-201ENST00000249209 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
EMC4-201ENST00000249209 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
EMC4-201ENST00000249209 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
EMC4-201ENST00000249209 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
EMC4-201ENST00000249209 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
EMC4-201ENST00000249209 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
EMC4-201ENST00000249209 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
EMC4-201ENST00000249209 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
EMC4-201ENST00000249209 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
EMC4-201ENST00000249209 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
EMC4-201ENST00000249209 DNMBPQ6XZF7 1577 aa27.64■■■□□ 2.01
EMC4-201ENST00000249209 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
EMC4-201ENST00000249209 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
EMC4-201ENST00000249209 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
EMC4-201ENST00000249209 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
EMC4-201ENST00000249209 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
EMC4-201ENST00000249209 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.99
EMC4-201ENST00000249209 CHD1O14646 1710 aa27.48■■□□□ 1.99
EMC4-201ENST00000249209 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
EMC4-201ENST00000249209 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
EMC4-201ENST00000249209 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
EMC4-201ENST00000249209 SOGA1O94964 1423 aa27.33■■□□□ 1.96
EMC4-201ENST00000249209 FBLN2P98095 1184 aa27.29■■□□□ 1.96
EMC4-201ENST00000249209 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
EMC4-201ENST00000249209 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
EMC4-201ENST00000249209 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
EMC4-201ENST00000249209 CUX1P39880 1505 aa27.26■■□□□ 1.95
EMC4-201ENST00000249209 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
EMC4-201ENST00000249209 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
EMC4-201ENST00000249209 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
EMC4-201ENST00000249209 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
EMC4-201ENST00000249209 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
EMC4-201ENST00000249209 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
EMC4-201ENST00000249209 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
EMC4-201ENST00000249209 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
EMC4-201ENST00000249209 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
EMC4-201ENST00000249209 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
EMC4-201ENST00000249209 SYNJ2O15056 1496 aa27■■□□□ 1.91
EMC4-201ENST00000249209 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
EMC4-201ENST00000249209 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
EMC4-201ENST00000249209 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
EMC4-201ENST00000249209 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.9
EMC4-201ENST00000249209 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
EMC4-201ENST00000249209 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
EMC4-201ENST00000249209 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
EMC4-201ENST00000249209 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
EMC4-201ENST00000249209 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
EMC4-201ENST00000249209 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
EMC4-201ENST00000249209 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
EMC4-201ENST00000249209 NUP160Q12769 1436 aa26.66■■□□□ 1.86
EMC4-201ENST00000249209 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
EMC4-201ENST00000249209 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
EMC4-201ENST00000249209 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
EMC4-201ENST00000249209 PRG4Q92954 1404 aaPredicted RBP26.41■■□□□ 1.82
EMC4-201ENST00000249209 JPH4Q96JJ6 628 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms