RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
TPX2-202ENST00000340513 MYT1Q01538 1121 aa20.87■□□□□ 0.93
TPX2-202ENST00000340513 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
TPX2-202ENST00000340513 HRCP23327 699 aa20■□□□□ 0.79
TPX2-202ENST00000340513 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
TPX2-202ENST00000340513 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
TPX2-202ENST00000340513 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
TPX2-202ENST00000340513 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
TPX2-202ENST00000340513 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
TPX2-202ENST00000340513 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
TPX2-202ENST00000340513 ERICH6Q7L0X2 663 aa19.33■□□□□ 0.68
TPX2-202ENST00000340513 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
TPX2-202ENST00000340513 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
TPX2-202ENST00000340513 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.63
TPX2-202ENST00000340513 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
TPX2-202ENST00000340513 APLP2Q06481 763 aa18.87■□□□□ 0.61
TPX2-202ENST00000340513 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
TPX2-202ENST00000340513 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
TPX2-202ENST00000340513 ANP32EQ9BTT0 268 aa18.57■□□□□ 0.56
TPX2-202ENST00000340513 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
TPX2-202ENST00000340513 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
TPX2-202ENST00000340513 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
TPX2-202ENST00000340513 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
TPX2-202ENST00000340513 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
TPX2-202ENST00000340513 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
TPX2-202ENST00000340513 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
TPX2-202ENST00000340513 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
TPX2-202ENST00000340513 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
TPX2-202ENST00000340513 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
TPX2-202ENST00000340513 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
TPX2-202ENST00000340513 ABCC9O60706 1549 aa17.99■□□□□ 0.47
TPX2-202ENST00000340513 DAXXQ9UER7 740 aaPredicted RBP17.93■□□□□ 0.46
TPX2-202ENST00000340513 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
TPX2-202ENST00000340513 SALL2Q9Y467 1007 aaPredicted RBP17.89■□□□□ 0.45
TPX2-202ENST00000340513 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.44
TPX2-202ENST00000340513 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
TPX2-202ENST00000340513 LOC105371045A0A1W2PR82 267 aa17.81■□□□□ 0.44
TPX2-202ENST00000340513 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
TPX2-202ENST00000340513 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
TPX2-202ENST00000340513 PKNOX2Q96KN3 472 aa17.72■□□□□ 0.43
TPX2-202ENST00000340513 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
TPX2-202ENST00000340513 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
TPX2-202ENST00000340513 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
TPX2-202ENST00000340513 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
TPX2-202ENST00000340513 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
TPX2-202ENST00000340513 BCANQ96GW7 911 aa17.56■□□□□ 0.4
TPX2-202ENST00000340513 DEKP35659 375 aaKnown RBP17.56■□□□□ 0.4
TPX2-202ENST00000340513 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
TPX2-202ENST00000340513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
TPX2-202ENST00000340513 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
TPX2-202ENST00000340513 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
TPX2-202ENST00000340513 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
TPX2-202ENST00000340513 MIER1Q8N108 512 aa17.35■□□□□ 0.37
TPX2-202ENST00000340513 A0A0U1RQG5 324 aaPredicted RBP17.3■□□□□ 0.36
TPX2-202ENST00000340513 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
TPX2-202ENST00000340513 NBR1Q14596 966 aa17.28■□□□□ 0.36
TPX2-202ENST00000340513 IL27Q8NEV9 243 aa17.25■□□□□ 0.35
TPX2-202ENST00000340513 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
TPX2-202ENST00000340513 MSH5O43196 834 aa17.22■□□□□ 0.35
TPX2-202ENST00000340513 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
TPX2-202ENST00000340513 NEFLP07196 543 aa17.17■□□□□ 0.34
TPX2-202ENST00000340513 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
TPX2-202ENST00000340513 ITGAEP38570 1179 aa17.15■□□□□ 0.34
TPX2-202ENST00000340513 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
TPX2-202ENST00000340513 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
TPX2-202ENST00000340513 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
TPX2-202ENST00000340513 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
TPX2-202ENST00000340513 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
TPX2-202ENST00000340513 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
TPX2-202ENST00000340513 FKBP8Q14318 412 aa17.09■□□□□ 0.33
TPX2-202ENST00000340513 PDE4CQ08493 712 aa17.07■□□□□ 0.32
TPX2-202ENST00000340513 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
TPX2-202ENST00000340513 ZMYND15Q9H091 742 aa17.03■□□□□ 0.32
TPX2-202ENST00000340513 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
TPX2-202ENST00000340513 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPX2-202ENST00000340513 NACADO15069 1562 aa16.96■□□□□ 0.31
TPX2-202ENST00000340513 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
TPX2-202ENST00000340513 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
TPX2-202ENST00000340513 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
TPX2-202ENST00000340513 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
TPX2-202ENST00000340513 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
TPX2-202ENST00000340513 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
TPX2-202ENST00000340513 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.28
TPX2-202ENST00000340513 FGD1P98174 961 aa16.77■□□□□ 0.27
TPX2-202ENST00000340513 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
TPX2-202ENST00000340513 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
TPX2-202ENST00000340513 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
TPX2-202ENST00000340513 AAMPQ13685 434 aa16.65■□□□□ 0.26
TPX2-202ENST00000340513 BRPF3Q9ULD4 1205 aa16.63■□□□□ 0.25
TPX2-202ENST00000340513 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
TPX2-202ENST00000340513 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
TPX2-202ENST00000340513 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
TPX2-202ENST00000340513 NEFMP07197 916 aa16.56■□□□□ 0.24
TPX2-202ENST00000340513 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
TPX2-202ENST00000340513 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
TPX2-202ENST00000340513 PAXIP1Q6ZW49 1069 aaPredicted RBP16.53■□□□□ 0.24
TPX2-202ENST00000340513 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
TPX2-202ENST00000340513 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.23
TPX2-202ENST00000340513 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
TPX2-202ENST00000340513 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms