RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
SMARCA4-212ENST00000586985 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
SMARCA4-212ENST00000586985 ABCC9O60706 1549 aa30.41■■■□□ 2.46
SMARCA4-212ENST00000586985 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
SMARCA4-212ENST00000586985 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
SMARCA4-212ENST00000586985 NACADO15069 1562 aa29.17■■■□□ 2.26
SMARCA4-212ENST00000586985 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
SMARCA4-212ENST00000586985 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
SMARCA4-212ENST00000586985 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
SMARCA4-212ENST00000586985 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
SMARCA4-212ENST00000586985 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
SMARCA4-212ENST00000586985 SCRIBQ14160 1630 aa28.27■■■□□ 2.12
SMARCA4-212ENST00000586985 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SMARCA4-212ENST00000586985 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
SMARCA4-212ENST00000586985 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
SMARCA4-212ENST00000586985 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
SMARCA4-212ENST00000586985 CC2D2AQ9P2K1 1620 aa27.42■■□□□ 1.98
SMARCA4-212ENST00000586985 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
SMARCA4-212ENST00000586985 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
SMARCA4-212ENST00000586985 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
SMARCA4-212ENST00000586985 NCAPD3P42695 1498 aa26.96■■□□□ 1.91
SMARCA4-212ENST00000586985 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
SMARCA4-212ENST00000586985 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
SMARCA4-212ENST00000586985 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
SMARCA4-212ENST00000586985 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
SMARCA4-212ENST00000586985 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
SMARCA4-212ENST00000586985 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SMARCA4-212ENST00000586985 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
SMARCA4-212ENST00000586985 WIZO95785 1651 aa26.56■■□□□ 1.84
SMARCA4-212ENST00000586985 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
SMARCA4-212ENST00000586985 NESP48681 1621 aa26.28■■□□□ 1.8
SMARCA4-212ENST00000586985 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
SMARCA4-212ENST00000586985 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
SMARCA4-212ENST00000586985 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
SMARCA4-212ENST00000586985 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
SMARCA4-212ENST00000586985 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
SMARCA4-212ENST00000586985 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
SMARCA4-212ENST00000586985 CFTRP13569 1480 aa26■■□□□ 1.75
SMARCA4-212ENST00000586985 CUX2O14529 1486 aa25.89■■□□□ 1.73
SMARCA4-212ENST00000586985 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
SMARCA4-212ENST00000586985 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
SMARCA4-212ENST00000586985 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
SMARCA4-212ENST00000586985 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
SMARCA4-212ENST00000586985 THOC2Q8NI27 1593 aaKnown RBP25.76■■□□□ 1.71
SMARCA4-212ENST00000586985 WDR62O43379 1518 aa25.63■■□□□ 1.69
SMARCA4-212ENST00000586985 PRDM2Q13029 1718 aa25.58■■□□□ 1.69
SMARCA4-212ENST00000586985 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
SMARCA4-212ENST00000586985 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
SMARCA4-212ENST00000586985 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
SMARCA4-212ENST00000586985 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
SMARCA4-212ENST00000586985 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
SMARCA4-212ENST00000586985 DNAJC5Q9H3Z4 198 aa25.22■■□□□ 1.63
SMARCA4-212ENST00000586985 CUX1P39880 1505 aa25.22■■□□□ 1.63
SMARCA4-212ENST00000586985 SOGA1O94964 1423 aa25.21■■□□□ 1.63
SMARCA4-212ENST00000586985 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
SMARCA4-212ENST00000586985 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
SMARCA4-212ENST00000586985 ZNF608Q9ULD9 1512 aaPredicted RBP25.16■■□□□ 1.62
SMARCA4-212ENST00000586985 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
SMARCA4-212ENST00000586985 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
SMARCA4-212ENST00000586985 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.6
SMARCA4-212ENST00000586985 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.6
SMARCA4-212ENST00000586985 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
SMARCA4-212ENST00000586985 OSCARQ8IYS5 282 aa25■■□□□ 1.59
SMARCA4-212ENST00000586985 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
SMARCA4-212ENST00000586985 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
SMARCA4-212ENST00000586985 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
SMARCA4-212ENST00000586985 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
SMARCA4-212ENST00000586985 FBLN2P98095 1184 aa24.91■■□□□ 1.58
SMARCA4-212ENST00000586985 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
SMARCA4-212ENST00000586985 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
SMARCA4-212ENST00000586985 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
SMARCA4-212ENST00000586985 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
SMARCA4-212ENST00000586985 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
SMARCA4-212ENST00000586985 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
SMARCA4-212ENST00000586985 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
SMARCA4-212ENST00000586985 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
SMARCA4-212ENST00000586985 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
SMARCA4-212ENST00000586985 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
SMARCA4-212ENST00000586985 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
SMARCA4-212ENST00000586985 PBRM1Q86U86 1689 aa24.64■■□□□ 1.53
SMARCA4-212ENST00000586985 CHD1O14646 1710 aa24.61■■□□□ 1.53
SMARCA4-212ENST00000586985 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
SMARCA4-212ENST00000586985 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
SMARCA4-212ENST00000586985 IGF1RP08069 1367 aa24.55■■□□□ 1.52
SMARCA4-212ENST00000586985 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
SMARCA4-212ENST00000586985 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
SMARCA4-212ENST00000586985 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
SMARCA4-212ENST00000586985 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
SMARCA4-212ENST00000586985 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
SMARCA4-212ENST00000586985 NUP160Q12769 1436 aa24.39■■□□□ 1.5
SMARCA4-212ENST00000586985 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
SMARCA4-212ENST00000586985 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
SMARCA4-212ENST00000586985 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
SMARCA4-212ENST00000586985 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
SMARCA4-212ENST00000586985 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
SMARCA4-212ENST00000586985 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SMARCA4-212ENST00000586985 CUL7Q14999 1698 aa24.33■■□□□ 1.49
SMARCA4-212ENST00000586985 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
SMARCA4-212ENST00000586985 JPH4Q96JJ6 628 aa24.3■■□□□ 1.48
SMARCA4-212ENST00000586985 CSRNP3Q8WYN3 585 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 526.1 ms