Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
UPK1BO75841 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.65■□□□□ 0.42
UPK1BO75841 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UPK1BO75841 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
UPK1BO75841 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UPK1BO75841 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UPK1BO75841 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UPK1BO75841 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.64■□□□□ 0.42
UPK1BO75841 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UPK1BO75841 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.64■□□□□ 0.41
UPK1BO75841 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.64■□□□□ 0.41
UPK1BO75841 AC068587.7-201ENST00000641602 218 ntBASIC17.64■□□□□ 0.41
UPK1BO75841 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.64■□□□□ 0.41
UPK1BO75841 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UPK1BO75841 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
UPK1BO75841 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPK1BO75841 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UPK1BO75841 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPK1BO75841 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
UPK1BO75841 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.63■□□□□ 0.41
UPK1BO75841 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.63■□□□□ 0.41
UPK1BO75841 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.63■□□□□ 0.41
UPK1BO75841 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.63■□□□□ 0.41
UPK1BO75841 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UPK1BO75841 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPK1BO75841 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.62■□□□□ 0.41
UPK1BO75841 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.62■□□□□ 0.41
UPK1BO75841 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 AL691432.2-201ENST00000607222 2038 ntBASIC17.62■□□□□ 0.41
UPK1BO75841 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPK1BO75841 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.62■□□□□ 0.41
UPK1BO75841 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.62■□□□□ 0.41
UPK1BO75841 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.62■□□□□ 0.41
UPK1BO75841 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UPK1BO75841 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.61■□□□□ 0.41
UPK1BO75841 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
UPK1BO75841 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 NOC2LP2-201ENST00000407594 1944 ntBASIC17.61■□□□□ 0.41
UPK1BO75841 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UPK1BO75841 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.61■□□□□ 0.41
UPK1BO75841 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UPK1BO75841 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
UPK1BO75841 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 AP006587.3-201ENST00000525742 1516 ntBASIC17.61■□□□□ 0.41
UPK1BO75841 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.61■□□□□ 0.41
UPK1BO75841 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.61■□□□□ 0.41
UPK1BO75841 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.61■□□□□ 0.41
UPK1BO75841 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.61■□□□□ 0.41
UPK1BO75841 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPK1BO75841 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms