RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
CHRDL2-210ENST00000622063 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
CHRDL2-210ENST00000622063 ABCC9O60706 1549 aa41.5■■■■■ 4.23
CHRDL2-210ENST00000622063 ZCCHC6Q5VYS8 1495 aaKnown RBP40.58■■■■■ 4.09
CHRDL2-210ENST00000622063 DCAF8L2P0C7V8 631 aa40.53■■■■■ 4.08
CHRDL2-210ENST00000622063 NACADO15069 1562 aa40.22■■■■■ 4.03
CHRDL2-210ENST00000622063 DCAF1Q9Y4B6 1507 aa40.2■■■■■ 4.03
CHRDL2-210ENST00000622063 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
CHRDL2-210ENST00000622063 RB1CC1Q8TDY2 1594 aa40.13■■■■■ 4.01
CHRDL2-210ENST00000622063 SCRIBQ14160 1630 aa39.24■■■■□ 3.87
CHRDL2-210ENST00000622063 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
CHRDL2-210ENST00000622063 PABPN1Q86U42 306 aaKnown RBP eCLIP38.94■■■■□ 3.82
CHRDL2-210ENST00000622063 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
CHRDL2-210ENST00000622063 SHROOM4Q9ULL8 1493 aa38.83■■■■□ 3.81
CHRDL2-210ENST00000622063 EIF4G1Q04637 1599 aaKnown RBP37.83■■■■□ 3.65
CHRDL2-210ENST00000622063 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
CHRDL2-210ENST00000622063 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
CHRDL2-210ENST00000622063 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
CHRDL2-210ENST00000622063 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
CHRDL2-210ENST00000622063 CC2D2AQ9P2K1 1620 aa37.52■■■■□ 3.6
CHRDL2-210ENST00000622063 MROH2BQ7Z745 1585 aa37.47■■■■□ 3.59
CHRDL2-210ENST00000622063 RSF1Q96T23 1441 aaPredicted RBP37.27■■■■□ 3.56
CHRDL2-210ENST00000622063 ATAD2BQ9ULI0 1458 aa37.24■■■■□ 3.55
CHRDL2-210ENST00000622063 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
CHRDL2-210ENST00000622063 PEG3Q9GZU2 1588 aa37.16■■■■□ 3.54
CHRDL2-210ENST00000622063 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
CHRDL2-210ENST00000622063 WIZO95785 1651 aa37.08■■■■□ 3.53
CHRDL2-210ENST00000622063 BAZ1BQ9UIG0 1483 aaKnown RBP36.98■■■■□ 3.51
CHRDL2-210ENST00000622063 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
CHRDL2-210ENST00000622063 SUPT5HO00267 1087 aaKnown RBP36.86■■■■□ 3.49
CHRDL2-210ENST00000622063 TOP2AP11388 1531 aaKnown RBP36.71■■■■□ 3.47
CHRDL2-210ENST00000622063 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.4
CHRDL2-210ENST00000622063 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
CHRDL2-210ENST00000622063 NESP48681 1621 aa36.07■■■■□ 3.37
CHRDL2-210ENST00000622063 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
CHRDL2-210ENST00000622063 CFTRP13569 1480 aa35.99■■■■□ 3.35
CHRDL2-210ENST00000622063 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
CHRDL2-210ENST00000622063 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
CHRDL2-210ENST00000622063 FANCD2Q9BXW9 1451 aa35.68■■■■□ 3.3
CHRDL2-210ENST00000622063 PRDM2Q13029 1718 aa35.68■■■■□ 3.3
CHRDL2-210ENST00000622063 KIF21AQ7Z4S6 1674 aa35.62■■■■□ 3.29
CHRDL2-210ENST00000622063 CEP164Q9UPV0 1460 aa35.58■■■■□ 3.29
CHRDL2-210ENST00000622063 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
CHRDL2-210ENST00000622063 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
CHRDL2-210ENST00000622063 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
CHRDL2-210ENST00000622063 WDR62O43379 1518 aa35.23■■■■□ 3.23
CHRDL2-210ENST00000622063 ABCC8Q09428 1581 aa35.2■■■■□ 3.23
CHRDL2-210ENST00000622063 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
CHRDL2-210ENST00000622063 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
CHRDL2-210ENST00000622063 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
CHRDL2-210ENST00000622063 CUX1P39880 1505 aa35.11■■■■□ 3.21
CHRDL2-210ENST00000622063 CUX2O14529 1486 aa35.1■■■■□ 3.21
CHRDL2-210ENST00000622063 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
CHRDL2-210ENST00000622063 TOP2BQ02880 1626 aa34.95■■■■□ 3.19
CHRDL2-210ENST00000622063 CHIC1Q5VXU3 224 aa34.94■■■■□ 3.18
CHRDL2-210ENST00000622063 BIVM-ERCC5R4GMW8 1640 aa34.91■■■■□ 3.18
CHRDL2-210ENST00000622063 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
CHRDL2-210ENST00000622063 POLA1P09884 1462 aaPredicted RBP34.91■■■■□ 3.18
CHRDL2-210ENST00000622063 SOGA1O94964 1423 aa34.82■■■■□ 3.16
CHRDL2-210ENST00000622063 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
CHRDL2-210ENST00000622063 TRIM41Q8WV44 630 aa34.79■■■■□ 3.16
CHRDL2-210ENST00000622063 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
CHRDL2-210ENST00000622063 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.15
CHRDL2-210ENST00000622063 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
CHRDL2-210ENST00000622063 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
CHRDL2-210ENST00000622063 TDRD9Q8NDG6 1382 aaKnown RBP34.56■■■■□ 3.12
CHRDL2-210ENST00000622063 WDR97A6NE52 1622 aa34.51■■■■□ 3.12
CHRDL2-210ENST00000622063 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.12
CHRDL2-210ENST00000622063 EIF4G3O43432 1585 aaKnown RBP34.46■■■■□ 3.11
CHRDL2-210ENST00000622063 GAPVD1Q14C86 1478 aa34.41■■■■□ 3.1
CHRDL2-210ENST00000622063 KIF27Q86VH2 1401 aa34.37■■■■□ 3.09
CHRDL2-210ENST00000622063 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
CHRDL2-210ENST00000622063 GRIN2BQ13224 1484 aa34.31■■■■□ 3.08
CHRDL2-210ENST00000622063 PBRM1Q86U86 1689 aa34.23■■■■□ 3.07
CHRDL2-210ENST00000622063 RUSC2Q8N2Y8 1516 aa34.22■■■■□ 3.07
CHRDL2-210ENST00000622063 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
CHRDL2-210ENST00000622063 ERICH3Q5RHP9 1530 aa34.18■■■■□ 3.06
CHRDL2-210ENST00000622063 IGF1RP08069 1367 aa34.16■■■■□ 3.06
CHRDL2-210ENST00000622063 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
CHRDL2-210ENST00000622063 EEA1Q15075 1411 aa34.07■■■■□ 3.05
CHRDL2-210ENST00000622063 FAM9AQ8IZU1 332 aaPredicted RBP34.07■■■■□ 3.04
CHRDL2-210ENST00000622063 FBLN2P98095 1184 aa34.06■■■■□ 3.04
CHRDL2-210ENST00000622063 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
CHRDL2-210ENST00000622063 FHAD1B1AJZ9 1412 aa34.02■■■■□ 3.04
CHRDL2-210ENST00000622063 SYNJ2O15056 1496 aa34.01■■■■□ 3.04
CHRDL2-210ENST00000622063 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
CHRDL2-210ENST00000622063 ADAMTS12P58397 1594 aa34■■■■□ 3.03
CHRDL2-210ENST00000622063 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
CHRDL2-210ENST00000622063 CUL7Q14999 1698 aa33.97■■■■□ 3.03
CHRDL2-210ENST00000622063 CHD1O14646 1710 aa33.89■■■■□ 3.02
CHRDL2-210ENST00000622063 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
CHRDL2-210ENST00000622063 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
CHRDL2-210ENST00000622063 PRXQ9BXM0 1461 aa33.82■■■■□ 3
CHRDL2-210ENST00000622063 RAPGEF2Q9Y4G8 1499 aa33.81■■■■□ 3
CHRDL2-210ENST00000622063 NUP160Q12769 1436 aa33.67■■■□□ 2.98
CHRDL2-210ENST00000622063 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
CHRDL2-210ENST00000622063 KIF21BO75037 1637 aa33.64■■■□□ 2.98
CHRDL2-210ENST00000622063 EHMT2Q96KQ7 1210 aa33.61■■■□□ 2.97
CHRDL2-210ENST00000622063 LOC105371045A0A1W2PR82 267 aa33.59■■■□□ 2.97
CHRDL2-210ENST00000622063 CLASP1Q7Z460 1538 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms