RNA–Protein interactions for RNA: ENST00000641568.1

AP003071.5-201, humanhuman

APPRIS P1 BASIC

Gene AP003071.5, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.5-201ENST00000641568 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
AP003071.5-201ENST00000641568 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
AP003071.5-201ENST00000641568 ABCC9O60706 1549 aa33.4■■■□□ 2.94
AP003071.5-201ENST00000641568 ZCCHC6Q5VYS8 1495 aaKnown RBP33.08■■■□□ 2.89
AP003071.5-201ENST00000641568 DCAF8L2P0C7V8 631 aa32.96■■■□□ 2.87
AP003071.5-201ENST00000641568 DCAF1Q9Y4B6 1507 aa32.53■■■□□ 2.8
AP003071.5-201ENST00000641568 NACADO15069 1562 aa32.35■■■□□ 2.77
AP003071.5-201ENST00000641568 MYO15BQ96JP2 1530 aa32.31■■■□□ 2.76
AP003071.5-201ENST00000641568 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
AP003071.5-201ENST00000641568 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
AP003071.5-201ENST00000641568 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
AP003071.5-201ENST00000641568 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
AP003071.5-201ENST00000641568 PABPN1Q86U42 306 aaKnown RBP eCLIP31.43■■■□□ 2.62
AP003071.5-201ENST00000641568 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
AP003071.5-201ENST00000641568 CECR2Q9BXF3 1484 aa30.85■■■□□ 2.53
AP003071.5-201ENST00000641568 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.49
AP003071.5-201ENST00000641568 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
AP003071.5-201ENST00000641568 BAZ1AQ9NRL2 1556 aaPredicted RBP30.51■■■□□ 2.48
AP003071.5-201ENST00000641568 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
AP003071.5-201ENST00000641568 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
AP003071.5-201ENST00000641568 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
AP003071.5-201ENST00000641568 WIZO95785 1651 aa30.31■■■□□ 2.44
AP003071.5-201ENST00000641568 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
AP003071.5-201ENST00000641568 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
AP003071.5-201ENST00000641568 PEG3Q9GZU2 1588 aa30.06■■■□□ 2.4
AP003071.5-201ENST00000641568 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
AP003071.5-201ENST00000641568 HRCP23327 699 aa30■■■□□ 2.39
AP003071.5-201ENST00000641568 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
AP003071.5-201ENST00000641568 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
AP003071.5-201ENST00000641568 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
AP003071.5-201ENST00000641568 NCAPD3P42695 1498 aa29.89■■■□□ 2.37
AP003071.5-201ENST00000641568 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
AP003071.5-201ENST00000641568 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
AP003071.5-201ENST00000641568 PELP1Q8IZL8 1130 aaKnown RBP29.47■■■□□ 2.31
AP003071.5-201ENST00000641568 PPARGC1BQ86YN6 1023 aaKnown RBP29.45■■■□□ 2.3
AP003071.5-201ENST00000641568 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
AP003071.5-201ENST00000641568 NESP48681 1621 aa29.18■■■□□ 2.26
AP003071.5-201ENST00000641568 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
AP003071.5-201ENST00000641568 CFTRP13569 1480 aa29.12■■■□□ 2.25
AP003071.5-201ENST00000641568 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
AP003071.5-201ENST00000641568 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
AP003071.5-201ENST00000641568 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
AP003071.5-201ENST00000641568 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
AP003071.5-201ENST00000641568 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
AP003071.5-201ENST00000641568 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
AP003071.5-201ENST00000641568 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
AP003071.5-201ENST00000641568 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
AP003071.5-201ENST00000641568 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
AP003071.5-201ENST00000641568 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
AP003071.5-201ENST00000641568 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
AP003071.5-201ENST00000641568 CUX1P39880 1505 aa28.61■■■□□ 2.17
AP003071.5-201ENST00000641568 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
AP003071.5-201ENST00000641568 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
AP003071.5-201ENST00000641568 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
AP003071.5-201ENST00000641568 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
AP003071.5-201ENST00000641568 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.15
AP003071.5-201ENST00000641568 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
AP003071.5-201ENST00000641568 MYT1Q01538 1121 aa28.4■■■□□ 2.14
AP003071.5-201ENST00000641568 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.14
AP003071.5-201ENST00000641568 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
AP003071.5-201ENST00000641568 WDR62O43379 1518 aa28.32■■■□□ 2.12
AP003071.5-201ENST00000641568 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
AP003071.5-201ENST00000641568 FAM9AQ8IZU1 332 aaPredicted RBP28.28■■■□□ 2.12
AP003071.5-201ENST00000641568 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
AP003071.5-201ENST00000641568 SOGA1O94964 1423 aa28.26■■■□□ 2.11
AP003071.5-201ENST00000641568 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
AP003071.5-201ENST00000641568 CUX2O14529 1486 aa28.17■■■□□ 2.1
AP003071.5-201ENST00000641568 TRIM26Q12899 539 aaPredicted RBP28.13■■■□□ 2.09
AP003071.5-201ENST00000641568 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
AP003071.5-201ENST00000641568 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
AP003071.5-201ENST00000641568 ABCA10Q8WWZ4 1543 aa28.04■■■□□ 2.08
AP003071.5-201ENST00000641568 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
AP003071.5-201ENST00000641568 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
AP003071.5-201ENST00000641568 ZNF608Q9ULD9 1512 aaPredicted RBP28.01■■■□□ 2.07
AP003071.5-201ENST00000641568 IFT140Q96RY7 1462 aa28■■■□□ 2.07
AP003071.5-201ENST00000641568 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
AP003071.5-201ENST00000641568 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
AP003071.5-201ENST00000641568 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
AP003071.5-201ENST00000641568 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.06
AP003071.5-201ENST00000641568 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.05
AP003071.5-201ENST00000641568 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
AP003071.5-201ENST00000641568 EEA1Q15075 1411 aa27.88■■■□□ 2.05
AP003071.5-201ENST00000641568 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
AP003071.5-201ENST00000641568 EIF4G3O43432 1585 aaKnown RBP27.85■■■□□ 2.05
AP003071.5-201ENST00000641568 IGF1RP08069 1367 aa27.82■■■□□ 2.04
AP003071.5-201ENST00000641568 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
AP003071.5-201ENST00000641568 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
AP003071.5-201ENST00000641568 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
AP003071.5-201ENST00000641568 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
AP003071.5-201ENST00000641568 RAPGEF2Q9Y4G8 1499 aa27.69■■■□□ 2.02
AP003071.5-201ENST00000641568 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
AP003071.5-201ENST00000641568 PRXQ9BXM0 1461 aa27.67■■■□□ 2.02
AP003071.5-201ENST00000641568 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
AP003071.5-201ENST00000641568 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
AP003071.5-201ENST00000641568 KIF21BO75037 1637 aa27.63■■■□□ 2.01
AP003071.5-201ENST00000641568 GTF3C3Q9Y5Q9 886 aa27.62■■■□□ 2.01
AP003071.5-201ENST00000641568 CUL7Q14999 1698 aa27.58■■■□□ 2.01
AP003071.5-201ENST00000641568 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms