RNA–Protein interactions for RNA: ENST00000415061.7

RDH13-203, Transcript of retinol dehydrogenase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH13, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-203ENST00000415061 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
RDH13-203ENST00000415061 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
RDH13-203ENST00000415061 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.44
RDH13-203ENST00000415061 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
RDH13-203ENST00000415061 ABCC9O60706 1549 aa35.85■■■■□ 3.33
RDH13-203ENST00000415061 DCAF8L2P0C7V8 631 aa35.84■■■■□ 3.33
RDH13-203ENST00000415061 DCAF1Q9Y4B6 1507 aa35.82■■■■□ 3.32
RDH13-203ENST00000415061 MYO15BQ96JP2 1530 aa35.2■■■■□ 3.23
RDH13-203ENST00000415061 NACADO15069 1562 aa35.06■■■■□ 3.2
RDH13-203ENST00000415061 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
RDH13-203ENST00000415061 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
RDH13-203ENST00000415061 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
RDH13-203ENST00000415061 UNC13AQ9UPW8 1703 aa34.17■■■■□ 3.06
RDH13-203ENST00000415061 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
RDH13-203ENST00000415061 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
RDH13-203ENST00000415061 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
RDH13-203ENST00000415061 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
RDH13-203ENST00000415061 MROH2BQ7Z745 1585 aa33.63■■■□□ 2.97
RDH13-203ENST00000415061 BAZ1AQ9NRL2 1556 aaPredicted RBP33.49■■■□□ 2.95
RDH13-203ENST00000415061 WIZO95785 1651 aa33.44■■■□□ 2.94
RDH13-203ENST00000415061 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
RDH13-203ENST00000415061 CHIC1Q5VXU3 224 aa33.33■■■□□ 2.93
RDH13-203ENST00000415061 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
RDH13-203ENST00000415061 PEG3Q9GZU2 1588 aa32.85■■■□□ 2.85
RDH13-203ENST00000415061 EIF4G1Q04637 1599 aaKnown RBP32.82■■■□□ 2.84
RDH13-203ENST00000415061 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
RDH13-203ENST00000415061 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
RDH13-203ENST00000415061 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
RDH13-203ENST00000415061 BAZ1BQ9UIG0 1483 aaKnown RBP32.51■■■□□ 2.79
RDH13-203ENST00000415061 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
RDH13-203ENST00000415061 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
RDH13-203ENST00000415061 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
RDH13-203ENST00000415061 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
RDH13-203ENST00000415061 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
RDH13-203ENST00000415061 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
RDH13-203ENST00000415061 FAM9AQ8IZU1 332 aaPredicted RBP32.01■■■□□ 2.72
RDH13-203ENST00000415061 WRNQ14191 1432 aaPredicted RBP eCLIP31.84■■■□□ 2.69
RDH13-203ENST00000415061 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
RDH13-203ENST00000415061 SYNJ1O43426 1573 aa31.79■■■□□ 2.68
RDH13-203ENST00000415061 CFTRP13569 1480 aa31.68■■■□□ 2.66
RDH13-203ENST00000415061 SOGA1O94964 1423 aa31.65■■■□□ 2.66
RDH13-203ENST00000415061 PRDM2Q13029 1718 aa31.65■■■□□ 2.66
RDH13-203ENST00000415061 EHMT2Q96KQ7 1210 aa31.63■■■□□ 2.65
RDH13-203ENST00000415061 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
RDH13-203ENST00000415061 RUSC2Q8N2Y8 1516 aa31.55■■■□□ 2.64
RDH13-203ENST00000415061 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
RDH13-203ENST00000415061 EEA1Q15075 1411 aa31.51■■■□□ 2.63
RDH13-203ENST00000415061 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
RDH13-203ENST00000415061 CUX1P39880 1505 aa31.42■■■□□ 2.62
RDH13-203ENST00000415061 CSRNP3Q8WYN3 585 aa31.37■■■□□ 2.61
RDH13-203ENST00000415061 NESP48681 1621 aa31.35■■■□□ 2.61
RDH13-203ENST00000415061 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
RDH13-203ENST00000415061 KIF21BO75037 1637 aa31.19■■■□□ 2.58
RDH13-203ENST00000415061 GOLGA3Q08378 1498 aa31.18■■■□□ 2.58
RDH13-203ENST00000415061 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
RDH13-203ENST00000415061 TNIKQ9UKE5 1360 aa31.13■■■□□ 2.57
RDH13-203ENST00000415061 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
RDH13-203ENST00000415061 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
RDH13-203ENST00000415061 PCGF6Q9BYE7 350 aa31.08■■■□□ 2.57
RDH13-203ENST00000415061 CEP162Q5TB80 1403 aa31.06■■■□□ 2.56
RDH13-203ENST00000415061 UBTFP17480 764 aaKnown RBP31.06■■■□□ 2.56
RDH13-203ENST00000415061 KIF21AQ7Z4S6 1674 aa31.02■■■□□ 2.56
RDH13-203ENST00000415061 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
RDH13-203ENST00000415061 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
RDH13-203ENST00000415061 KIF27Q86VH2 1401 aa30.97■■■□□ 2.55
RDH13-203ENST00000415061 DNMBPQ6XZF7 1577 aa30.97■■■□□ 2.55
RDH13-203ENST00000415061 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
RDH13-203ENST00000415061 TRIM26Q12899 539 aaPredicted RBP30.89■■■□□ 2.53
RDH13-203ENST00000415061 PRXQ9BXM0 1461 aa30.88■■■□□ 2.53
RDH13-203ENST00000415061 CUX2O14529 1486 aa30.87■■■□□ 2.53
RDH13-203ENST00000415061 ERICH3Q5RHP9 1530 aa30.87■■■□□ 2.53
RDH13-203ENST00000415061 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
RDH13-203ENST00000415061 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
RDH13-203ENST00000415061 POLA1P09884 1462 aaPredicted RBP30.78■■■□□ 2.52
RDH13-203ENST00000415061 RAD54L2Q9Y4B4 1467 aa30.73■■■□□ 2.51
RDH13-203ENST00000415061 MRC2Q9UBG0 1479 aa30.72■■■□□ 2.51
RDH13-203ENST00000415061 CLIP1P30622 1438 aa30.71■■■□□ 2.51
RDH13-203ENST00000415061 PPARGC1BQ86YN6 1023 aaKnown RBP30.68■■■□□ 2.5
RDH13-203ENST00000415061 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
RDH13-203ENST00000415061 IGF1RP08069 1367 aa30.68■■■□□ 2.5
RDH13-203ENST00000415061 WDR97A6NE52 1622 aa30.64■■■□□ 2.49
RDH13-203ENST00000415061 WDR62O43379 1518 aa30.56■■■□□ 2.48
RDH13-203ENST00000415061 RANGAP1P46060 587 aaPredicted RBP30.55■■■□□ 2.48
RDH13-203ENST00000415061 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
RDH13-203ENST00000415061 CARMIL1Q5VZK9 1371 aa30.53■■■□□ 2.48
RDH13-203ENST00000415061 VPS8Q8N3P4 1428 aa30.48■■■□□ 2.47
RDH13-203ENST00000415061 HRCP23327 699 aa30.46■■■□□ 2.47
RDH13-203ENST00000415061 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
RDH13-203ENST00000415061 CUL7Q14999 1698 aa30.43■■■□□ 2.46
RDH13-203ENST00000415061 TARBP1Q13395 1621 aaKnown RBP30.43■■■□□ 2.46
RDH13-203ENST00000415061 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
RDH13-203ENST00000415061 TTBK1Q5TCY1 1321 aaPredicted RBP30.37■■■□□ 2.45
RDH13-203ENST00000415061 TDRD9Q8NDG6 1382 aaKnown RBP30.37■■■□□ 2.45
RDH13-203ENST00000415061 GAPVD1Q14C86 1478 aa30.34■■■□□ 2.45
RDH13-203ENST00000415061 ARHGAP35Q9NRY4 1499 aa30.31■■■□□ 2.44
RDH13-203ENST00000415061 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
RDH13-203ENST00000415061 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
RDH13-203ENST00000415061 CTTNBP2Q8WZ74 1663 aa30.23■■■□□ 2.43
RDH13-203ENST00000415061 APLP2Q06481 763 aa30.16■■■□□ 2.42
RDH13-203ENST00000415061 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.411e-9■■■■■ 45.4
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms