RNA–Protein interactions for RNA: ENST00000542060.5

STX6-204, Transcript of syntaxin 6, humanhuman

TSL 2 BASIC

Gene STX6, Length 4,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX6-204ENST00000542060 NISCHQ9Y2I1 1504 aa35.45■■■■□ 3.27
STX6-204ENST00000542060 DCAF8L2P0C7V8 631 aa34.89■■■■□ 3.18
STX6-204ENST00000542060 SUPT5HO00267 1087 aaKnown RBP32.75■■■□□ 2.83
STX6-204ENST00000542060 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
STX6-204ENST00000542060 EHMT2Q96KQ7 1210 aa31.05■■■□□ 2.56
STX6-204ENST00000542060 APLP2Q06481 763 aa30.73■■■□□ 2.51
STX6-204ENST00000542060 FAM9AQ8IZU1 332 aaPredicted RBP30.71■■■□□ 2.51
STX6-204ENST00000542060 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
STX6-204ENST00000542060 ABCC9O60706 1549 aa30.47■■■□□ 2.47
STX6-204ENST00000542060 RANGAP1P46060 587 aaPredicted RBP30.05■■■□□ 2.4
STX6-204ENST00000542060 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
STX6-204ENST00000542060 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
STX6-204ENST00000542060 TTBK1Q5TCY1 1321 aaPredicted RBP29.89■■■□□ 2.38
STX6-204ENST00000542060 ATP1B4Q9UN42 357 aaPredicted RBP29.83■■■□□ 2.37
STX6-204ENST00000542060 PCGF6Q9BYE7 350 aa29.69■■■□□ 2.34
STX6-204ENST00000542060 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
STX6-204ENST00000542060 CHIC1Q5VXU3 224 aa29.47■■■□□ 2.31
STX6-204ENST00000542060 ZCCHC6Q5VYS8 1495 aaKnown RBP29.37■■■□□ 2.29
STX6-204ENST00000542060 ZEB1P37275 1124 aaPredicted RBP29.26■■■□□ 2.27
STX6-204ENST00000542060 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
STX6-204ENST00000542060 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
STX6-204ENST00000542060 LOC105371045A0A1W2PR82 267 aa29.06■■■□□ 2.24
STX6-204ENST00000542060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
STX6-204ENST00000542060 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
STX6-204ENST00000542060 PPARGC1BQ86YN6 1023 aaKnown RBP29.02■■■□□ 2.24
STX6-204ENST00000542060 TRIM26Q12899 539 aaPredicted RBP28.92■■■□□ 2.22
STX6-204ENST00000542060 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
STX6-204ENST00000542060 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
STX6-204ENST00000542060 MYT1LQ9UL68 1186 aa28.73■■■□□ 2.19
STX6-204ENST00000542060 ITGAEP38570 1179 aa28.7■■■□□ 2.19
STX6-204ENST00000542060 NACADO15069 1562 aa28.66■■■□□ 2.18
STX6-204ENST00000542060 FBLN2P98095 1184 aa28.5■■■□□ 2.15
STX6-204ENST00000542060 CSRNP3Q8WYN3 585 aa28.44■■■□□ 2.14
STX6-204ENST00000542060 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
STX6-204ENST00000542060 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
STX6-204ENST00000542060 FAM50AQ14320 339 aaKnown RBP28.26■■■□□ 2.11
STX6-204ENST00000542060 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
STX6-204ENST00000542060 HRCP23327 699 aa28.08■■■□□ 2.09
STX6-204ENST00000542060 P3H3Q8IVL6 736 aa28.06■■■□□ 2.08
STX6-204ENST00000542060 TRIM52Q96A61 297 aa27.99■■■□□ 2.07
STX6-204ENST00000542060 POLR3GLQ9BT43 218 aa27.96■■■□□ 2.07
STX6-204ENST00000542060 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
STX6-204ENST00000542060 CDK11AQ9UQ88 783 aaPredicted RBP27.94■■■□□ 2.06
STX6-204ENST00000542060 NEFLP07196 543 aa27.89■■■□□ 2.06
STX6-204ENST00000542060 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
STX6-204ENST00000542060 YTHDC1Q96MU7 727 aaKnown RBP27.87■■■□□ 2.05
STX6-204ENST00000542060 ARID3CA6NKF2 412 aa27.82■■■□□ 2.04
STX6-204ENST00000542060 CECR2Q9BXF3 1484 aa27.69■■■□□ 2.02
STX6-204ENST00000542060 MYO15BQ96JP2 1530 aa27.68■■■□□ 2.02
STX6-204ENST00000542060 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
STX6-204ENST00000542060 NEUROD1Q13562 356 aa27.66■■■□□ 2.02
STX6-204ENST00000542060 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
STX6-204ENST00000542060 ZNF777Q9ULD5 760 aaPredicted RBP27.63■■■□□ 2.01
STX6-204ENST00000542060 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
STX6-204ENST00000542060 EEA1Q15075 1411 aa27.62■■■□□ 2.01
STX6-204ENST00000542060 SLC4A1APQ9BWU0 796 aaKnown RBP27.56■■■□□ 2
STX6-204ENST00000542060 CNGB1Q14028 1251 aaPredicted RBP27.51■■■□□ 2
STX6-204ENST00000542060 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
STX6-204ENST00000542060 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
STX6-204ENST00000542060 ERCC6Q03468 1493 aa27.4■■□□□ 1.98
STX6-204ENST00000542060 CLIP1P30622 1438 aa27.4■■□□□ 1.98
STX6-204ENST00000542060 DIEXFQ68CQ4 756 aaKnown RBP27.38■■□□□ 1.97
STX6-204ENST00000542060 ERICH6Q7L0X2 663 aa27.37■■□□□ 1.97
STX6-204ENST00000542060 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
STX6-204ENST00000542060 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
STX6-204ENST00000542060 GOLGA3Q08378 1498 aa27.35■■□□□ 1.97
STX6-204ENST00000542060 MTUS2Q5JR59 1369 aa27.31■■□□□ 1.96
STX6-204ENST00000542060 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
STX6-204ENST00000542060 TSPY4P0CV99 314 aa27.2■■□□□ 1.95
STX6-204ENST00000542060 TSPY10P0CW01 314 aa27.2■■□□□ 1.95
STX6-204ENST00000542060 CEP164Q9UPV0 1460 aa27.2■■□□□ 1.94
STX6-204ENST00000542060 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
STX6-204ENST00000542060 BCANQ96GW7 911 aa27.15■■□□□ 1.94
STX6-204ENST00000542060 CEP162Q5TB80 1403 aa27.14■■□□□ 1.93
STX6-204ENST00000542060 PLEKHD1A6NEE1 506 aa27.13■■□□□ 1.93
STX6-204ENST00000542060 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
STX6-204ENST00000542060 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
STX6-204ENST00000542060 ANP32CO43423 234 aa27.11■■□□□ 1.93
STX6-204ENST00000542060 CHIC2Q9UKJ5 165 aa27.1■■□□□ 1.93
STX6-204ENST00000542060 ZNF316A6NFI3 1004 aaPredicted RBP27.09■■□□□ 1.93
STX6-204ENST00000542060 TONSLQ96HA7 1378 aa27.04■■□□□ 1.92
STX6-204ENST00000542060 CUX2O14529 1486 aa27.02■■□□□ 1.92
STX6-204ENST00000542060 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
STX6-204ENST00000542060 STAG3Q9UJ98 1225 aa27■■□□□ 1.91
STX6-204ENST00000542060 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
STX6-204ENST00000542060 CHGAP10645 457 aaKnown RBP26.98■■□□□ 1.91
STX6-204ENST00000542060 KCNH8Q96L42 1107 aa26.98■■□□□ 1.91
STX6-204ENST00000542060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.95■■□□□ 1.92e-6■■□□□ 11.9
STX6-204ENST00000542060 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.9
STX6-204ENST00000542060 CADPSQ9ULU8 1353 aa26.93■■□□□ 1.9
STX6-204ENST00000542060 WIZO95785 1651 aa26.9■■□□□ 1.9
STX6-204ENST00000542060 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
STX6-204ENST00000542060 SOGA1O94964 1423 aa26.86■■□□□ 1.89
STX6-204ENST00000542060 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
STX6-204ENST00000542060 CFDP1Q9UEE9 299 aaPredicted RBP26.83■■□□□ 1.89
STX6-204ENST00000542060 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
STX6-204ENST00000542060 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
STX6-204ENST00000542060 DAXXQ9UER7 740 aaPredicted RBP26.77■■□□□ 1.88
STX6-204ENST00000542060 NEFMP07197 916 aa26.77■■□□□ 1.88
STX6-204ENST00000542060 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms