Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.666e-8■■□□□ 12.9
PRPF8Q6P2Q9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.666e-8■■□□□ 12.9
PRPF8Q6P2Q9 C19orf60-205ENST00000597371 1081 ntTSL 318.68■□□□□ 0.586e-8■■□□□ 12.9
PRPF8Q6P2Q9 C19orf60-206ENST00000598375 1792 ntTSL 517.77■□□□□ 0.446e-8■■□□□ 12.9
PRPF8Q6P2Q9 C19orf60-207ENST00000600997 2275 ntTSL 215.8■□□□□ 0.126e-8■■□□□ 12.9
PRPF8Q6P2Q9 C19orf60-208ENST00000601736 491 ntTSL 214.66□□□□□ -0.066e-8■■□□□ 12.9
PRPF8Q6P2Q9 RRBP1-207ENST00000468428 2200 ntTSL 212.38□□□□□ -0.433e-12■■□□□ 12.9
PRPF8Q6P2Q9 CALR-205ENST00000587486 957 ntTSL 214.25□□□□□ -0.131e-19■■□□□ 12.8
PRPF8Q6P2Q9 MAP4-201ENST00000335271 1564 ntAPPRIS ALT2 TSL 212.44□□□□□ -0.421e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP4-208ENST00000429422 3724 ntTSL 1 (best)9.57□□□□□ -0.881e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.161e-6■■□□□ 12.8
PRPF8Q6P2Q9 TRIM47-205ENST00000587774 720 ntTSL 216.46■□□□□ 0.231e-12■■□□□ 12.8
PRPF8Q6P2Q9 PIEZO1-212ENST00000497793 1228 ntTSL 216.75■□□□□ 0.275e-40■■□□□ 12.8
PRPF8Q6P2Q9 PIEZO1-204ENST00000466823 584 ntTSL 27.2□□□□□ -1.265e-40■■□□□ 12.8
PRPF8Q6P2Q9 SEMA4G-208ENST00000518948 376 ntTSL 310.7□□□□□ -0.74e-10■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-202ENST00000444355 640 ntTSL 212.04□□□□□ -0.485e-10■■□□□ 12.8
PRPF8Q6P2Q9 ATP5A1-208ENST00000589252 662 ntTSL 516.75■□□□□ 0.272e-8■■□□□ 12.8
PRPF8Q6P2Q9 ATP5A1-210ENST00000589869 910 ntTSL 312.95□□□□□ -0.342e-8■■□□□ 12.8
PRPF8Q6P2Q9 ATP5A1-218ENST00000592364 576 ntTSL 511.28□□□□□ -0.62e-8■■□□□ 12.8
PRPF8Q6P2Q9 COBLL1-211ENST00000452626 772 ntTSL 5-0.77□□□□□ -2.538e-8■■□□□ 12.8
PRPF8Q6P2Q9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.3■□□□□ 0.041e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.061e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-208ENST00000540700 627 ntTSL 214.13□□□□□ -0.151e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-204ENST00000536661 624 ntTSL 212.83□□□□□ -0.361e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.83□□□□□ -0.361e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-211ENST00000542416 517 ntTSL 47.94□□□□□ -1.141e-10■■□□□ 12.8
PRPF8Q6P2Q9 UBC-213ENST00000546120 718 ntTSL 5 BASIC6.55□□□□□ -1.361e-10■■□□□ 12.8
PRPF8Q6P2Q9 YIPF3-211ENST00000503147 652 ntTSL 210.38□□□□□ -0.753e-7■■□□□ 12.8
PRPF8Q6P2Q9 YIPF3-216ENST00000512713 306 ntTSL 27.78□□□□□ -1.163e-7■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-203ENST00000586439 744 ntTSL 516.67■□□□□ 0.262e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-204ENST00000586789 993 ntTSL 516.49■□□□□ 0.232e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.32e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-206ENST00000589591 542 ntTSL 211.99□□□□□ -0.492e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-205ENST00000589069 582 ntTSL 211.97□□□□□ -0.492e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-202ENST00000585842 368 ntTSL 29.89□□□□□ -0.832e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR2I-207ENST00000592962 493 ntTSL 29.31□□□□□ -0.922e-10■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.16■□□□□ 0.185e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-204ENST00000412965 852 ntTSL 315.21■□□□□ 0.035e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.015e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-214ENST00000497897 1562 ntTSL 214.9□□□□□ -0.025e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-202ENST00000357419 1463 ntTSL 214.33□□□□□ -0.125e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.25□□□□□ -0.135e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.325e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-213ENST00000486114 568 ntTSL 312.8□□□□□ -0.365e-7■■□□□ 12.8
PRPF8Q6P2Q9 ABHD11-206ENST00000437891 760 ntTSL 510.35□□□□□ -0.755e-7■■□□□ 12.8
PRPF8Q6P2Q9 PRCC-205ENST00000473387 452 ntTSL 25.78□□□□□ -1.482e-6■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.416e-8■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.626e-8■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC10.06□□□□□ -0.86e-8■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-205ENST00000433667 3800 ntTSL 5 BASIC9.22□□□□□ -0.936e-8■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-201ENST00000265346 3643 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.946e-8■■□□□ 12.8
PRPF8Q6P2Q9 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC8.24□□□□□ -1.096e-8■■□□□ 12.8
PRPF8Q6P2Q9 MFF-214ENST00000452930 736 ntTSL 415.5■□□□□ 0.072e-10■■□□□ 12.8
PRPF8Q6P2Q9 SH3D19-205ENST00000462257 882 ntTSL 26.21□□□□□ -1.424e-8■■□□□ 12.8
PRPF8Q6P2Q9 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 517.07■□□□□ 0.321e-8■■□□□ 12.8
PRPF8Q6P2Q9 C9orf3-208ENST00000451893 514 ntTSL 318.55■□□□□ 0.562e-10■■□□□ 12.8
PRPF8Q6P2Q9 C9orf3-222ENST00000496567 1575 ntTSL 517.93■□□□□ 0.462e-10■■□□□ 12.8
PRPF8Q6P2Q9 ZNF335-202ENST00000475002 1721 ntTSL 215.95■□□□□ 0.142e-7■■□□□ 12.8
PRPF8Q6P2Q9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.232e-9■■□□□ 12.8
PRPF8Q6P2Q9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.65■□□□□ 0.262e-7■■□□□ 12.8
PRPF8Q6P2Q9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.14■□□□□ 0.815e-18■■□□□ 12.8
PRPF8Q6P2Q9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.2■□□□□ 0.022e-16■■□□□ 12.8
PRPF8Q6P2Q9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.3□□□□□ -0.62e-16■■□□□ 12.8
PRPF8Q6P2Q9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.632e-16■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-221ENST00000498366 2153 ntTSL 515.14■□□□□ 0.013e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)14.92□□□□□ -0.023e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-206ENST00000454936 1922 ntTSL 214.25□□□□□ -0.133e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.98□□□□□ -0.173e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.8□□□□□ -0.23e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-214ENST00000483222 2091 ntTSL 513.74□□□□□ -0.213e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.223e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.63□□□□□ -0.233e-7■■□□□ 12.8
PRPF8Q6P2Q9 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)13.53□□□□□ -0.243e-7■■□□□ 12.8
PRPF8Q6P2Q9 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC8.45□□□□□ -1.063e-6■■□□□ 12.8
PRPF8Q6P2Q9 IFRD1-208ENST00000443101 440 ntTSL 31.68□□□□□ -2.143e-6■■□□□ 12.8
PRPF8Q6P2Q9 PUS1-204ENST00000456665 577 ntTSL 520.43■□□□□ 0.865e-10■■□□□ 12.8
PRPF8Q6P2Q9 PUS1-210ENST00000544213 687 ntTSL 520.43■□□□□ 0.865e-10■■□□□ 12.8
PRPF8Q6P2Q9 PUS1-211ENST00000544662 836 ntTSL 318.51■□□□□ 0.555e-10■■□□□ 12.8
PRPF8Q6P2Q9 NHSL1-201ENST00000342260 736 ntAPPRIS ALT2 TSL 59.66□□□□□ -0.867e-8■■□□□ 12.8
PRPF8Q6P2Q9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.42■□□□□ 0.224e-9■■□□□ 12.8
PRPF8Q6P2Q9 ASL-209ENST00000493708 885 ntTSL 321.95■■□□□ 1.17e-7■■□□□ 12.8
PRPF8Q6P2Q9 AC068533.4-201ENST00000450043 922 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.047e-7■■□□□ 12.8
PRPF8Q6P2Q9 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.619e-7■■□□□ 12.8
PRPF8Q6P2Q9 AMPD2-220ENST00000528958 714 ntTSL 213.47□□□□□ -0.256e-8■■□□□ 12.8
PRPF8Q6P2Q9 STAT6-224ENST00000557781 1569 ntTSL 214.61□□□□□ -0.076e-7■■□□□ 12.8
PRPF8Q6P2Q9 ASCC2-217ENST00000478812 827 ntTSL 57.58□□□□□ -1.28e-9■■□□□ 12.8
PRPF8Q6P2Q9 ARHGAP1-206ENST00000528837 1000 ntTSL 58.44□□□□□ -1.061e-7■■□□□ 12.8
PRPF8Q6P2Q9 NT5C3B-213ENST00000517701 1028 ntTSL 210.38□□□□□ -0.754e-7■■□□□ 12.8
PRPF8Q6P2Q9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.91■□□□□ 0.784e-8■■□□□ 12.8
PRPF8Q6P2Q9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.364e-8■■□□□ 12.8
PRPF8Q6P2Q9 CTDSP2-207ENST00000551594 900 ntTSL 315.69■□□□□ 0.14e-8■■□□□ 12.8
PRPF8Q6P2Q9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.314e-8■■□□□ 12.8
PRPF8Q6P2Q9 CTDSP2-206ENST00000550144 544 ntTSL 49.25□□□□□ -0.934e-8■■□□□ 12.8
PRPF8Q6P2Q9 HGS-211ENST00000573949 461 ntTSL 511.32□□□□□ -0.62e-8■■□□□ 12.8
PRPF8Q6P2Q9 GIT1-202ENST00000335356 660 ntTSL 324.55■■□□□ 1.521e-7■■□□□ 12.8
PRPF8Q6P2Q9 PSMB4-206ENST00000495288 986 ntTSL 213.98□□□□□ -0.173e-7■■□□□ 12.8
PRPF8Q6P2Q9 PSMB4-205ENST00000493673 1650 ntTSL 513.26□□□□□ -0.293e-7■■□□□ 12.8
PRPF8Q6P2Q9 GIT1-213ENST00000583413 546 ntTSL 412.17□□□□□ -0.461e-7■■□□□ 12.8
PRPF8Q6P2Q9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.553e-7■■□□□ 12.8
PRPF8Q6P2Q9 PSMB4-207ENST00000495805 811 ntTSL 211.34□□□□□ -0.593e-7■■□□□ 12.8
Retrieved 100 of 73,762 protein–RNA pairs in 822.8 ms