RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 NISCHQ9Y2I1 1504 aa47.09■■■■■ 5.13
TRIM47-205ENST00000587774 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.37
TRIM47-205ENST00000587774 ABCC9O60706 1549 aa41.91■■■■■ 4.3
TRIM47-205ENST00000587774 RB1CC1Q8TDY2 1594 aa40.09■■■■■ 4.01
TRIM47-205ENST00000587774 NACADO15069 1562 aa39.84■■■■□ 3.97
TRIM47-205ENST00000587774 UNC13AQ9UPW8 1703 aa39.5■■■■□ 3.91
TRIM47-205ENST00000587774 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
TRIM47-205ENST00000587774 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
TRIM47-205ENST00000587774 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
TRIM47-205ENST00000587774 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
TRIM47-205ENST00000587774 BICRAQ9NZM4 1560 aa38.95■■■■□ 3.83
TRIM47-205ENST00000587774 DCAF1Q9Y4B6 1507 aa38.93■■■■□ 3.82
TRIM47-205ENST00000587774 PABPN1Q86U42 306 aaKnown RBP eCLIP38.91■■■■□ 3.82
TRIM47-205ENST00000587774 SCRIBQ14160 1630 aa38.54■■■■□ 3.76
TRIM47-205ENST00000587774 SHROOM4Q9ULL8 1493 aa38.37■■■■□ 3.73
TRIM47-205ENST00000587774 CC2D2AQ9P2K1 1620 aa38■■■■□ 3.67
TRIM47-205ENST00000587774 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
TRIM47-205ENST00000587774 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
TRIM47-205ENST00000587774 SMARCA4P51532 1647 aa36.8■■■■□ 3.48
TRIM47-205ENST00000587774 NCAPD3P42695 1498 aa36.67■■■■□ 3.46
TRIM47-205ENST00000587774 ATAD2BQ9ULI0 1458 aa36.62■■■■□ 3.45
TRIM47-205ENST00000587774 SMARCA2P51531 1590 aa36.6■■■■□ 3.45
TRIM47-205ENST00000587774 BAZ1AQ9NRL2 1556 aaPredicted RBP36.57■■■■□ 3.45
TRIM47-205ENST00000587774 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
TRIM47-205ENST00000587774 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
TRIM47-205ENST00000587774 BAZ1BQ9UIG0 1483 aaKnown RBP36.31■■■■□ 3.4
TRIM47-205ENST00000587774 MROH2BQ7Z745 1585 aa36.3■■■■□ 3.4
TRIM47-205ENST00000587774 ERCC6Q03468 1493 aa36.16■■■■□ 3.38
TRIM47-205ENST00000587774 NESP48681 1621 aa36.1■■■■□ 3.37
TRIM47-205ENST00000587774 CUX2O14529 1486 aa36.04■■■■□ 3.36
TRIM47-205ENST00000587774 WIZO95785 1651 aa35.99■■■■□ 3.35
TRIM47-205ENST00000587774 LAMC3Q9Y6N6 1575 aa35.95■■■■□ 3.35
TRIM47-205ENST00000587774 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.33
TRIM47-205ENST00000587774 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
TRIM47-205ENST00000587774 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
TRIM47-205ENST00000587774 PDS5BQ9NTI5 1447 aa35.57■■■■□ 3.28
TRIM47-205ENST00000587774 RSF1Q96T23 1441 aaPredicted RBP35.54■■■■□ 3.28
TRIM47-205ENST00000587774 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
TRIM47-205ENST00000587774 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
TRIM47-205ENST00000587774 MRC2Q9UBG0 1479 aa35.34■■■■□ 3.25
TRIM47-205ENST00000587774 PRDM2Q13029 1718 aa35.33■■■■□ 3.25
TRIM47-205ENST00000587774 WDR62O43379 1518 aa35.32■■■■□ 3.24
TRIM47-205ENST00000587774 CEP164Q9UPV0 1460 aa35.25■■■■□ 3.23
TRIM47-205ENST00000587774 CFTRP13569 1480 aa35.23■■■■□ 3.23
TRIM47-205ENST00000587774 FANCD2Q9BXW9 1451 aa35.21■■■■□ 3.23
TRIM47-205ENST00000587774 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
TRIM47-205ENST00000587774 URB2Q14146 1524 aaKnown RBP34.94■■■■□ 3.18
TRIM47-205ENST00000587774 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
TRIM47-205ENST00000587774 DNMBPQ6XZF7 1577 aa34.55■■■■□ 3.12
TRIM47-205ENST00000587774 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
TRIM47-205ENST00000587774 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
TRIM47-205ENST00000587774 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
TRIM47-205ENST00000587774 EIF4G3O43432 1585 aaKnown RBP34.43■■■■□ 3.1
TRIM47-205ENST00000587774 TARBP1Q13395 1621 aaKnown RBP34.38■■■■□ 3.09
TRIM47-205ENST00000587774 POLA1P09884 1462 aaPredicted RBP34.26■■■■□ 3.07
TRIM47-205ENST00000587774 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
TRIM47-205ENST00000587774 CHD1O14646 1710 aa34.24■■■■□ 3.07
TRIM47-205ENST00000587774 TRIM41Q8WV44 630 aa34.15■■■■□ 3.06
TRIM47-205ENST00000587774 CUX1P39880 1505 aa34.11■■■■□ 3.05
TRIM47-205ENST00000587774 AQRO60306 1485 aaKnown RBP eCLIP34.1■■■■□ 3.052e-7■□□□□ 10.4
TRIM47-205ENST00000587774 RIMBP3CA6NJZ7 1639 aa34.09■■■■□ 3.05
TRIM47-205ENST00000587774 RIMBP3BA6NNM3 1639 aa34.09■■■■□ 3.05
TRIM47-205ENST00000587774 RIMBP3Q9UFD9 1639 aa34.09■■■■□ 3.05
TRIM47-205ENST00000587774 RAD54L2Q9Y4B4 1467 aa34.08■■■■□ 3.05
TRIM47-205ENST00000587774 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.05
TRIM47-205ENST00000587774 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
TRIM47-205ENST00000587774 SUPT5HO00267 1087 aaKnown RBP34.01■■■■□ 3.03
TRIM47-205ENST00000587774 SOGA1O94964 1423 aa33.99■■■■□ 3.03
TRIM47-205ENST00000587774 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
TRIM47-205ENST00000587774 ARHGEF11O15085 1522 aa33.92■■■■□ 3.02
TRIM47-205ENST00000587774 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
TRIM47-205ENST00000587774 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
TRIM47-205ENST00000587774 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
TRIM47-205ENST00000587774 BIVM-ERCC5R4GMW8 1640 aa33.76■■■■□ 3
TRIM47-205ENST00000587774 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■□□ 2.99
TRIM47-205ENST00000587774 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
TRIM47-205ENST00000587774 FBLN2P98095 1184 aa33.73■■■□□ 2.99
TRIM47-205ENST00000587774 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
TRIM47-205ENST00000587774 CLASP1Q7Z460 1538 aa33.68■■■□□ 2.98
TRIM47-205ENST00000587774 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
TRIM47-205ENST00000587774 SYNJ1O43426 1573 aa33.66■■■□□ 2.98
TRIM47-205ENST00000587774 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
TRIM47-205ENST00000587774 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
TRIM47-205ENST00000587774 ARAP1Q96P48 1450 aa33.58■■■□□ 2.97
TRIM47-205ENST00000587774 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
TRIM47-205ENST00000587774 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
TRIM47-205ENST00000587774 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
TRIM47-205ENST00000587774 CYB5RLQ6IPT4 315 aa33.45■■■□□ 2.95
TRIM47-205ENST00000587774 GRIN2AQ12879 1464 aa33.35■■■□□ 2.93
TRIM47-205ENST00000587774 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
TRIM47-205ENST00000587774 ERICH3Q5RHP9 1530 aa33.3■■■□□ 2.92
TRIM47-205ENST00000587774 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
TRIM47-205ENST00000587774 NUP160Q12769 1436 aa33.19■■■□□ 2.9
TRIM47-205ENST00000587774 SHROOM2Q13796 1616 aa33.18■■■□□ 2.9
TRIM47-205ENST00000587774 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
TRIM47-205ENST00000587774 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
TRIM47-205ENST00000587774 TRHP20396 242 aaPredicted RBP33■■■□□ 2.87
TRIM47-205ENST00000587774 CUL7Q14999 1698 aa32.98■■■□□ 2.87
TRIM47-205ENST00000587774 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
TRIM47-205ENST00000587774 PRG4Q92954 1404 aaPredicted RBP32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms