RNA–Protein interactions for RNA: ENST00000601736.1

C19orf60-208, Transcript of Uncharacterized protein C19orf60, human

TSL 2

Gene C19orf60, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C19orf60-208	ENST00000601736	NISCH	Q9Y2I1	1504 aa		42.2	■■■■■ 4.35
C19orf60-208	ENST00000601736	CCDC180	Q9P1Z9	1646 aa		37.64	■■■■□ 3.62
C19orf60-208	ENST00000601736	ABCC9	O60706	1549 aa		37.1	■■■■□ 3.53
C19orf60-208	ENST00000601736	RB1CC1	Q8TDY2	1594 aa		35.55	■■■■□ 3.28
C19orf60-208	ENST00000601736	NACAD	O15069	1562 aa		35.42	■■■■□ 3.26
C19orf60-208	ENST00000601736	DCAF8L2	P0C7V8	631 aa		35.41	■■■■□ 3.26
C19orf60-208	ENST00000601736	ZCCHC6	Q5VYS8	1495 aa	Known RBP	35.1	■■■■□ 3.21
C19orf60-208	ENST00000601736	MYO15B	Q96JP2	1530 aa		35.1	■■■■□ 3.21
C19orf60-208	ENST00000601736	DCAF1	Q9Y4B6	1507 aa		34.86	■■■■□ 3.17
C19orf60-208	ENST00000601736	UNC13A	Q9UPW8	1703 aa		34.81	■■■■□ 3.16
C19orf60-208	ENST00000601736	PABPN1	Q86U42	306 aa	Known RBP eCLIP	34.64	■■■■□ 3.14
C19orf60-208	ENST00000601736	BICRA	Q9NZM4	1560 aa		34.5	■■■■□ 3.11
C19orf60-208	ENST00000601736	SCRIB	Q14160	1630 aa		34.37	■■■■□ 3.09
C19orf60-208	ENST00000601736	DNAJC5B	Q9UF47	199 aa		34.29	■■■■□ 3.08
C19orf60-208	ENST00000601736	SHROOM4	Q9ULL8	1493 aa		34.04	■■■■□ 3.04
C19orf60-208	ENST00000601736	EIF4G1	Q04637	1599 aa	Known RBP	33.6	■■■□□ 2.97
C19orf60-208	ENST00000601736	CC2D2A	Q9P2K1	1620 aa		33.55	■■■□□ 2.96
C19orf60-208	ENST00000601736	CECR2	Q9BXF3	1484 aa		33.35	■■■□□ 2.93
C19orf60-208	ENST00000601736	SMARCA4	P51532	1647 aa		32.83	■■■□□ 2.85
C19orf60-208	ENST00000601736	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.72	■■■□□ 2.83
C19orf60-208	ENST00000601736	NCAPD3	P42695	1498 aa		32.68	■■■□□ 2.82
C19orf60-208	ENST00000601736	ATAD2B	Q9ULI0	1458 aa		32.68	■■■□□ 2.82
C19orf60-208	ENST00000601736	SMARCA2	P51531	1590 aa		32.62	■■■□□ 2.81
C19orf60-208	ENST00000601736	MROH2B	Q7Z745	1585 aa		32.55	■■■□□ 2.8
C19orf60-208	ENST00000601736	HMGXB3	Q12766	1538 aa		32.51	■■■□□ 2.8
C19orf60-208	ENST00000601736	PEG3	Q9GZU2	1588 aa		32.47	■■■□□ 2.79
C19orf60-208	ENST00000601736	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.42	■■■□□ 2.78
C19orf60-208	ENST00000601736	WIZ	O95785	1651 aa		32.21	■■■□□ 2.75
C19orf60-208	ENST00000601736	RSF1	Q96T23	1441 aa	Predicted RBP	32.06	■■■□□ 2.72
C19orf60-208	ENST00000601736	NES	P48681	1621 aa		32.04	■■■□□ 2.72
C19orf60-208	ENST00000601736	ERCC6	Q03468	1493 aa		31.99	■■■□□ 2.71
C19orf60-208	ENST00000601736	LAMC3	Q9Y6N6	1575 aa		31.89	■■■□□ 2.7
C19orf60-208	ENST00000601736	TOP2A	P11388	1531 aa	Known RBP	31.81	■■■□□ 2.68
C19orf60-208	ENST00000601736	CADPS	Q9ULU8	1353 aa		31.73	■■■□□ 2.67
C19orf60-208	ENST00000601736	CUX2	O14529	1486 aa		31.71	■■■□□ 2.67
C19orf60-208	ENST00000601736	KIF21A	Q7Z4S6	1674 aa		31.67	■■■□□ 2.66
C19orf60-208	ENST00000601736	PDS5B	Q9NTI5	1447 aa		31.66	■■■□□ 2.66
C19orf60-208	ENST00000601736	THOC2	Q8NI27	1593 aa	Known RBP	31.6	■■■□□ 2.65
C19orf60-208	ENST00000601736	CFTR	P13569	1480 aa		31.49	■■■□□ 2.63
C19orf60-208	ENST00000601736	CCDC88B	A6NC98	1476 aa		31.44	■■■□□ 2.62
C19orf60-208	ENST00000601736	FANCD2	Q9BXW9	1451 aa		31.39	■■■□□ 2.62
C19orf60-208	ENST00000601736	MRC2	Q9UBG0	1479 aa		31.38	■■■□□ 2.61
C19orf60-208	ENST00000601736	CEP164	Q9UPV0	1460 aa		31.37	■■■□□ 2.61
C19orf60-208	ENST00000601736	PRDM2	Q13029	1718 aa		31.29	■■■□□ 2.6
C19orf60-208	ENST00000601736	WDR62	O43379	1518 aa		31.29	■■■□□ 2.6
C19orf60-208	ENST00000601736	URB2	Q14146	1524 aa	Known RBP	31.1	■■■□□ 2.57
C19orf60-208	ENST00000601736	SUPT5H	O00267	1087 aa	Known RBP	31.1	■■■□□ 2.57
C19orf60-208	ENST00000601736	DNAJC5	Q9H3Z4	198 aa		31.04	■■■□□ 2.56
C19orf60-208	ENST00000601736	TOPBP1	Q92547	1522 aa		30.86	■■■□□ 2.53
C19orf60-208	ENST00000601736	DNMBP	Q6XZF7	1577 aa		30.8	■■■□□ 2.52
C19orf60-208	ENST00000601736	ABCC8	Q09428	1581 aa		30.79	■■■□□ 2.52
C19orf60-208	ENST00000601736	IFT140	Q96RY7	1462 aa		30.71	■■■□□ 2.51
C19orf60-208	ENST00000601736	ZNF608	Q9ULD9	1512 aa	Predicted RBP	30.63	■■■□□ 2.49
C19orf60-208	ENST00000601736	POLA1	P09884	1462 aa	Predicted RBP	30.58	■■■□□ 2.49
C19orf60-208	ENST00000601736	TARBP1	Q13395	1621 aa	Known RBP	30.55	■■■□□ 2.48
C19orf60-208	ENST00000601736	CUX1	P39880	1505 aa		30.54	■■■□□ 2.48
C19orf60-208	ENST00000601736	EIF4G3	O43432	1585 aa	Known RBP	30.5	■■■□□ 2.47
C19orf60-208	ENST00000601736	FGD5	Q6ZNL6	1462 aa		30.48	■■■□□ 2.47
C19orf60-208	ENST00000601736	RAD54L2	Q9Y4B4	1467 aa		30.47	■■■□□ 2.47
C19orf60-208	ENST00000601736	SOGA1	O94964	1423 aa		30.45	■■■□□ 2.46
C19orf60-208	ENST00000601736	AQR	O60306	1485 aa	Known RBP eCLIP	30.42	■■■□□ 2.46	1e-6	■■■■□ 22.5
C19orf60-208	ENST00000601736	OSCAR	Q8IYS5	282 aa		30.36	■■■□□ 2.45
C19orf60-208	ENST00000601736	TDRD9	Q8NDG6	1382 aa	Known RBP	30.32	■■■□□ 2.44
C19orf60-208	ENST00000601736	WDR97	A6NE52	1622 aa		30.25	■■■□□ 2.43
C19orf60-208	ENST00000601736	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.24	■■■□□ 2.43
C19orf60-208	ENST00000601736	BIVM-ERCC5	R4GMW8	1640 aa		30.22	■■■□□ 2.43
C19orf60-208	ENST00000601736	SYNJ1	O43426	1573 aa		30.21	■■■□□ 2.43
C19orf60-208	ENST00000601736	TOP2B	Q02880	1626 aa		30.21	■■■□□ 2.43
C19orf60-208	ENST00000601736	CHD1	O14646	1710 aa		30.2	■■■□□ 2.43
C19orf60-208	ENST00000601736	ABCA10	Q8WWZ4	1543 aa		30.15	■■■□□ 2.42
C19orf60-208	ENST00000601736	SNAPC4	Q5SXM2	1469 aa		30.13	■■■□□ 2.41
C19orf60-208	ENST00000601736	FBLN2	P98095	1184 aa		30.12	■■■□□ 2.41
C19orf60-208	ENST00000601736	GRIN2B	Q13224	1484 aa		30.12	■■■□□ 2.41
C19orf60-208	ENST00000601736	GAPVD1	Q14C86	1478 aa		30.09	■■■□□ 2.41
C19orf60-208	ENST00000601736	PBRM1	Q86U86	1689 aa		30.09	■■■□□ 2.41
C19orf60-208	ENST00000601736	ABCA5	Q8WWZ7	1642 aa		30.07	■■■□□ 2.4
C19orf60-208	ENST00000601736	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.06	■■■□□ 2.4
C19orf60-208	ENST00000601736	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.97	■■■□□ 2.39
C19orf60-208	ENST00000601736	TRIM41	Q8WV44	630 aa		29.96	■■■□□ 2.39
C19orf60-208	ENST00000601736	SYNJ2	O15056	1496 aa		29.95	■■■□□ 2.39
C19orf60-208	ENST00000601736	RIMBP3C	A6NJZ7	1639 aa		29.95	■■■□□ 2.38
C19orf60-208	ENST00000601736	RIMBP3B	A6NNM3	1639 aa		29.95	■■■□□ 2.38
C19orf60-208	ENST00000601736	RIMBP3	Q9UFD9	1639 aa		29.95	■■■□□ 2.38
C19orf60-208	ENST00000601736	ARHGEF11	O15085	1522 aa		29.9	■■■□□ 2.38
C19orf60-208	ENST00000601736	CLASP1	Q7Z460	1538 aa		29.81	■■■□□ 2.36
C19orf60-208	ENST00000601736	ADAMTS12	P58397	1594 aa		29.81	■■■□□ 2.36
C19orf60-208	ENST00000601736	ERICH3	Q5RHP9	1530 aa		29.78	■■■□□ 2.36
C19orf60-208	ENST00000601736	GRIN2A	Q12879	1464 aa		29.74	■■■□□ 2.35
C19orf60-208	ENST00000601736	FHAD1	B1AJZ9	1412 aa		29.72	■■■□□ 2.35
C19orf60-208	ENST00000601736	ARAP1	Q96P48	1450 aa		29.64	■■■□□ 2.34
C19orf60-208	ENST00000601736	CYB5RL	Q6IPT4	315 aa		29.63	■■■□□ 2.33
C19orf60-208	ENST00000601736	CEP170	Q5SW79	1584 aa		29.62	■■■□□ 2.33
C19orf60-208	ENST00000601736	KIF27	Q86VH2	1401 aa		29.61	■■■□□ 2.33
C19orf60-208	ENST00000601736	NUP160	Q12769	1436 aa		29.6	■■■□□ 2.33
C19orf60-208	ENST00000601736	IGF1R	P08069	1367 aa		29.52	■■■□□ 2.32
C19orf60-208	ENST00000601736	CUL7	Q14999	1698 aa		29.48	■■■□□ 2.31
C19orf60-208	ENST00000601736	ERCC6L2	Q5T890	1561 aa		29.43	■■■□□ 2.3
C19orf60-208	ENST00000601736	SHROOM2	Q13796	1616 aa		29.42	■■■□□ 2.3
C19orf60-208	ENST00000601736	RUSC2	Q8N2Y8	1516 aa		29.37	■■■□□ 2.29
C19orf60-208	ENST00000601736	CARMIL1	Q5VZK9	1371 aa		29.36	■■■□□ 2.29

Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms