RNA–Protein interactions for RNA: ENST00000443101.6

IFRD1-208, Transcript of interferon related developmental regulator 1, humanhuman

TSL 3

Gene IFRD1, Length 440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-208ENST00000443101 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
IFRD1-208ENST00000443101 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
IFRD1-208ENST00000443101 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
IFRD1-208ENST00000443101 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
IFRD1-208ENST00000443101 FOXD1Q16676 465 aa20.56■□□□□ 0.88
IFRD1-208ENST00000443101 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
IFRD1-208ENST00000443101 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
IFRD1-208ENST00000443101 ADRA2BP18089 450 aa19.48■□□□□ 0.71
IFRD1-208ENST00000443101 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
IFRD1-208ENST00000443101 MSH5O43196 834 aa19■□□□□ 0.63
IFRD1-208ENST00000443101 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
IFRD1-208ENST00000443101 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
IFRD1-208ENST00000443101 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
IFRD1-208ENST00000443101 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
IFRD1-208ENST00000443101 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
IFRD1-208ENST00000443101 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
IFRD1-208ENST00000443101 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
IFRD1-208ENST00000443101 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
IFRD1-208ENST00000443101 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
IFRD1-208ENST00000443101 KCNA4P22459 653 aa16.91■□□□□ 0.3
IFRD1-208ENST00000443101 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
IFRD1-208ENST00000443101 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
IFRD1-208ENST00000443101 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
IFRD1-208ENST00000443101 RNF39Q9H2S5 420 aa16.31■□□□□ 0.2
IFRD1-208ENST00000443101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.183e-8■■■■□ 20.8
IFRD1-208ENST00000443101 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
IFRD1-208ENST00000443101 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
IFRD1-208ENST00000443101 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
IFRD1-208ENST00000443101 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
IFRD1-208ENST00000443101 U3KPZ7 1027 aaPredicted RBP15.98■□□□□ 0.15
IFRD1-208ENST00000443101 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
IFRD1-208ENST00000443101 ZBTB22O15209 634 aa15.61■□□□□ 0.09
IFRD1-208ENST00000443101 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
IFRD1-208ENST00000443101 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
IFRD1-208ENST00000443101 CAPN15O75808 1086 aa15.53■□□□□ 0.08
IFRD1-208ENST00000443101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
IFRD1-208ENST00000443101 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
IFRD1-208ENST00000443101 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
IFRD1-208ENST00000443101 APLP2Q06481 763 aa15.41■□□□□ 0.06
IFRD1-208ENST00000443101 DSG3P32926 999 aa15.4■□□□□ 0.06
IFRD1-208ENST00000443101 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
IFRD1-208ENST00000443101 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
IFRD1-208ENST00000443101 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
IFRD1-208ENST00000443101 ABCB7O75027 752 aa15.26■□□□□ 0.03
IFRD1-208ENST00000443101 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
IFRD1-208ENST00000443101 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
IFRD1-208ENST00000443101 POLA2Q14181 598 aa15.07■□□□□ 0
IFRD1-208ENST00000443101 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
IFRD1-208ENST00000443101 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
IFRD1-208ENST00000443101 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
IFRD1-208ENST00000443101 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
IFRD1-208ENST00000443101 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
IFRD1-208ENST00000443101 FBLN2P98095 1184 aa14.52□□□□□ -0.09
IFRD1-208ENST00000443101 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
IFRD1-208ENST00000443101 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
IFRD1-208ENST00000443101 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
IFRD1-208ENST00000443101 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
IFRD1-208ENST00000443101 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
IFRD1-208ENST00000443101 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
IFRD1-208ENST00000443101 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
IFRD1-208ENST00000443101 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
IFRD1-208ENST00000443101 POTEHQ6S545 545 aa14.17□□□□□ -0.14
IFRD1-208ENST00000443101 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
IFRD1-208ENST00000443101 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
IFRD1-208ENST00000443101 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
IFRD1-208ENST00000443101 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
IFRD1-208ENST00000443101 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
IFRD1-208ENST00000443101 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
IFRD1-208ENST00000443101 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
IFRD1-208ENST00000443101 PROM2Q8N271 834 aa13.77□□□□□ -0.21
IFRD1-208ENST00000443101 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
IFRD1-208ENST00000443101 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
IFRD1-208ENST00000443101 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
IFRD1-208ENST00000443101 FKBP8Q14318 412 aa13.7□□□□□ -0.22
IFRD1-208ENST00000443101 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
IFRD1-208ENST00000443101 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
IFRD1-208ENST00000443101 HAX1O00165 279 aa13.56□□□□□ -0.24
IFRD1-208ENST00000443101 EVX2Q03828 476 aa13.53□□□□□ -0.24
IFRD1-208ENST00000443101 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
IFRD1-208ENST00000443101 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
IFRD1-208ENST00000443101 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
IFRD1-208ENST00000443101 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
IFRD1-208ENST00000443101 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
IFRD1-208ENST00000443101 MIER1Q8N108 512 aa13.3□□□□□ -0.28
IFRD1-208ENST00000443101 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
IFRD1-208ENST00000443101 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
IFRD1-208ENST00000443101 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
IFRD1-208ENST00000443101 GABBR2O75899 941 aa13.19□□□□□ -0.3
IFRD1-208ENST00000443101 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
IFRD1-208ENST00000443101 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
IFRD1-208ENST00000443101 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
IFRD1-208ENST00000443101 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
IFRD1-208ENST00000443101 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
IFRD1-208ENST00000443101 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
IFRD1-208ENST00000443101 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
IFRD1-208ENST00000443101 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
IFRD1-208ENST00000443101 NUBP1P53384 320 aa13.05□□□□□ -0.32
IFRD1-208ENST00000443101 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
IFRD1-208ENST00000443101 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
IFRD1-208ENST00000443101 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms