RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
CTDSP2-206ENST00000550144 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
CTDSP2-206ENST00000550144 ABCC9O60706 1549 aa22.43■■□□□ 1.18
CTDSP2-206ENST00000550144 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
CTDSP2-206ENST00000550144 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
CTDSP2-206ENST00000550144 DCAF1Q9Y4B6 1507 aa22.08■■□□□ 1.13
CTDSP2-206ENST00000550144 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
CTDSP2-206ENST00000550144 NACADO15069 1562 aa21.87■■□□□ 1.09
CTDSP2-206ENST00000550144 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
CTDSP2-206ENST00000550144 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
CTDSP2-206ENST00000550144 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
CTDSP2-206ENST00000550144 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
CTDSP2-206ENST00000550144 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
CTDSP2-206ENST00000550144 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
CTDSP2-206ENST00000550144 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
CTDSP2-206ENST00000550144 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
CTDSP2-206ENST00000550144 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
CTDSP2-206ENST00000550144 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
CTDSP2-206ENST00000550144 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
CTDSP2-206ENST00000550144 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
CTDSP2-206ENST00000550144 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
CTDSP2-206ENST00000550144 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
CTDSP2-206ENST00000550144 WIZO95785 1651 aa20.39■□□□□ 0.86
CTDSP2-206ENST00000550144 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
CTDSP2-206ENST00000550144 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
CTDSP2-206ENST00000550144 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
CTDSP2-206ENST00000550144 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
CTDSP2-206ENST00000550144 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
CTDSP2-206ENST00000550144 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
CTDSP2-206ENST00000550144 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
CTDSP2-206ENST00000550144 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
CTDSP2-206ENST00000550144 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
CTDSP2-206ENST00000550144 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
CTDSP2-206ENST00000550144 CFTRP13569 1480 aa19.64■□□□□ 0.73
CTDSP2-206ENST00000550144 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
CTDSP2-206ENST00000550144 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
CTDSP2-206ENST00000550144 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
CTDSP2-206ENST00000550144 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
CTDSP2-206ENST00000550144 NESP48681 1621 aa19.5■□□□□ 0.71
CTDSP2-206ENST00000550144 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
CTDSP2-206ENST00000550144 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
CTDSP2-206ENST00000550144 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
CTDSP2-206ENST00000550144 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
CTDSP2-206ENST00000550144 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
CTDSP2-206ENST00000550144 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
CTDSP2-206ENST00000550144 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
CTDSP2-206ENST00000550144 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
CTDSP2-206ENST00000550144 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
CTDSP2-206ENST00000550144 CUX1P39880 1505 aa19.26■□□□□ 0.67
CTDSP2-206ENST00000550144 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
CTDSP2-206ENST00000550144 CUX2O14529 1486 aa19.24■□□□□ 0.67
CTDSP2-206ENST00000550144 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
CTDSP2-206ENST00000550144 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
CTDSP2-206ENST00000550144 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
CTDSP2-206ENST00000550144 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
CTDSP2-206ENST00000550144 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
CTDSP2-206ENST00000550144 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
CTDSP2-206ENST00000550144 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
CTDSP2-206ENST00000550144 WDR62O43379 1518 aa19.05■□□□□ 0.64
CTDSP2-206ENST00000550144 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
CTDSP2-206ENST00000550144 SOGA1O94964 1423 aa19.04■□□□□ 0.64
CTDSP2-206ENST00000550144 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
CTDSP2-206ENST00000550144 EEA1Q15075 1411 aa19.01■□□□□ 0.63
CTDSP2-206ENST00000550144 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
CTDSP2-206ENST00000550144 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
CTDSP2-206ENST00000550144 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
CTDSP2-206ENST00000550144 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
CTDSP2-206ENST00000550144 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
CTDSP2-206ENST00000550144 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
CTDSP2-206ENST00000550144 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
CTDSP2-206ENST00000550144 WDR97A6NE52 1622 aa18.89■□□□□ 0.61
CTDSP2-206ENST00000550144 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-206ENST00000550144 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
CTDSP2-206ENST00000550144 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
CTDSP2-206ENST00000550144 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
CTDSP2-206ENST00000550144 IGF1RP08069 1367 aa18.78■□□□□ 0.6
CTDSP2-206ENST00000550144 KIF21BO75037 1637 aa18.76■□□□□ 0.59
CTDSP2-206ENST00000550144 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
CTDSP2-206ENST00000550144 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
CTDSP2-206ENST00000550144 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.597e-7■■■■□ 25.9
CTDSP2-206ENST00000550144 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
CTDSP2-206ENST00000550144 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
CTDSP2-206ENST00000550144 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
CTDSP2-206ENST00000550144 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
CTDSP2-206ENST00000550144 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
CTDSP2-206ENST00000550144 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
CTDSP2-206ENST00000550144 CUL7Q14999 1698 aa18.69■□□□□ 0.58
CTDSP2-206ENST00000550144 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
CTDSP2-206ENST00000550144 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
CTDSP2-206ENST00000550144 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
CTDSP2-206ENST00000550144 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
CTDSP2-206ENST00000550144 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
CTDSP2-206ENST00000550144 ADAMTS12P58397 1594 aa18.58■□□□□ 0.56
CTDSP2-206ENST00000550144 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
CTDSP2-206ENST00000550144 MAGI1Q96QZ7 1491 aaPredicted RBP18.56■□□□□ 0.56
CTDSP2-206ENST00000550144 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
CTDSP2-206ENST00000550144 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
CTDSP2-206ENST00000550144 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
CTDSP2-206ENST00000550144 GRIN2AQ12879 1464 aa18.45■□□□□ 0.54
CTDSP2-206ENST00000550144 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms