Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.955e-8■■□□□ 13.2
PRPF8Q6P2Q9 PIGQ-213ENST00000540241 608 ntTSL 310.69□□□□□ -0.79e-7■■□□□ 13.2
PRPF8Q6P2Q9 NPL-207ENST00000460690 804 ntTSL 317.8■□□□□ 0.445e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-211ENST00000488424 2144 ntTSL 1 (best)15.89■□□□□ 0.135e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-209ENST00000471010 518 ntTSL 313.61□□□□□ -0.235e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-208ENST00000463899 2369 ntTSL 1 (best)11.91□□□□□ -0.55e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.6□□□□□ -0.555e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC10.53□□□□□ -0.725e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.61□□□□□ -1.355e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-210ENST00000479721 585 ntTSL 36.61□□□□□ -1.355e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.445e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.26□□□□□ -1.575e-11■■□□□ 13.2
PRPF8Q6P2Q9 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.585e-11■■□□□ 13.2
PRPF8Q6P2Q9 TFR2-209ENST00000473963 771 ntTSL 312.05□□□□□ -0.483e-7■■□□□ 13.2
PRPF8Q6P2Q9 GDPD5-205ENST00000527322 1000 ntTSL 1 (best)9.67□□□□□ -0.862e-7■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.297e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.04■□□□□ -07e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-207ENST00000602804 1804 ntTSL 214.67□□□□□ -0.067e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-201ENST00000354191 1695 ntTSL 214.65□□□□□ -0.067e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-208ENST00000630940 1664 ntTSL 213.65□□□□□ -0.227e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.247e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-205ENST00000602438 576 ntTSL 411.66□□□□□ -0.547e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.617e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-204ENST00000488252 3149 ntTSL 29.74□□□□□ -0.857e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-MEF2B-206ENST00000602689 554 ntTSL 39.36□□□□□ -0.917e-9■■□□□ 13.2
PRPF8Q6P2Q9 BORCS8-205ENST00000494489 877 ntTSL 39.31□□□□□ -0.927e-9■■□□□ 13.2
PRPF8Q6P2Q9 ALDOA-223ENST00000567555 554 ntTSL 1 (best)13.24□□□□□ -0.296e-25■■□□□ 13.2
PRPF8Q6P2Q9 DDX56-209ENST00000473924 385 ntTSL 510.33□□□□□ -0.766e-10■■□□□ 13.2
PRPF8Q6P2Q9 SMG7-205ENST00000440812 1190 ntTSL 518.36■□□□□ 0.533e-11■■□□□ 13.2
PRPF8Q6P2Q9 SMG7-203ENST00000367538 328 ntTSL 216.36■□□□□ 0.213e-11■■□□□ 13.2
PRPF8Q6P2Q9 SMG7-206ENST00000444547 580 ntTSL 416.06■□□□□ 0.163e-11■■□□□ 13.2
PRPF8Q6P2Q9 SMG7-213ENST00000507691 760 ntTSL 515.12■□□□□ 0.013e-11■■□□□ 13.2
PRPF8Q6P2Q9 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.25□□□□□ -1.253e-11■■□□□ 13.2
PRPF8Q6P2Q9 CRNDE-209ENST00000560208 735 ntTSL 220.01■□□□□ 0.793e-21■■□□□ 13.2
PRPF8Q6P2Q9 CRNDE-205ENST00000558952 600 ntTSL 418.2■□□□□ 0.53e-21■■□□□ 13.2
PRPF8Q6P2Q9 ADGRG6-209ENST00000497898 715 ntTSL 1 (best)-0.52□□□□□ -2.494e-11■■□□□ 13.2
PRPF8Q6P2Q9 SEPT2-237ENST00000481500 756 ntTSL 25.83□□□□□ -1.485e-7■■□□□ 13.2
PRPF8Q6P2Q9 SAFB-214ENST00000592707 940 ntTSL 211.94□□□□□ -0.53e-9■■□□□ 13.2
PRPF8Q6P2Q9 SAFB-212ENST00000592396 620 ntTSL 45.34□□□□□ -1.553e-9■■□□□ 13.2
PRPF8Q6P2Q9 ZSWIM8-219ENST00000604165 582 ntTSL 518.1■□□□□ 0.498e-8■■□□□ 13.2
PRPF8Q6P2Q9 SMARCD2-208ENST00000580054 477 ntTSL 58.56□□□□□ -1.043e-7■■□□□ 13.2
PRPF8Q6P2Q9 PHYKPL-215ENST00000510913 643 ntTSL 36.66□□□□□ -1.342e-20■■□□□ 13.2
PRPF8Q6P2Q9 FBXW2-203ENST00000476481 661 ntTSL 316.67■□□□□ 0.261e-6■■□□□ 13.2
PRPF8Q6P2Q9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.13e-7■■□□□ 13.2
PRPF8Q6P2Q9 C2CD2-204ENST00000467074 1952 ntTSL 58.89□□□□□ -0.993e-7■■□□□ 13.2
PRPF8Q6P2Q9 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC8.18□□□□□ -1.13e-7■■□□□ 13.2
PRPF8Q6P2Q9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.481e-6■■□□□ 13.2
PRPF8Q6P2Q9 DDB1-212ENST00000538470 858 ntTSL 27.6□□□□□ -1.196e-7■■□□□ 13.2
PRPF8Q6P2Q9 PRKCSH-204ENST00000587290 780 ntTSL 213.31□□□□□ -0.289e-17■■□□□ 13.2
PRPF8Q6P2Q9 TLK1-210ENST00000478683 2749 ntTSL 1 (best)6.05□□□□□ -1.446e-10■■□□□ 13.2
PRPF8Q6P2Q9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.061e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-212ENST00000525165 573 ntTSL 212.02□□□□□ -0.492e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-213ENST00000525326 492 ntTSL 411.92□□□□□ -0.52e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-210ENST00000436153 705 ntTSL 210.32□□□□□ -0.762e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-214ENST00000525410 595 ntTSL 49.96□□□□□ -0.812e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-211ENST00000487944 717 ntTSL 29.56□□□□□ -0.882e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-220ENST00000528557 516 ntTSL 49.31□□□□□ -0.922e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-221ENST00000529688 589 ntTSL 49.31□□□□□ -0.922e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-215ENST00000525546 581 ntTSL 28.72□□□□□ -1.012e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-204ENST00000374186 656 ntTSL 38.08□□□□□ -1.122e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-222ENST00000530781 556 ntTSL 47.36□□□□□ -1.232e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-223ENST00000531312 496 ntTSL 47.09□□□□□ -1.282e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-225ENST00000533087 582 ntTSL 57.09□□□□□ -1.282e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-218ENST00000526278 548 ntTSL 47.07□□□□□ -1.282e-6■■□□□ 13.2
PRPF8Q6P2Q9 DHDDS-224ENST00000531955 559 ntTSL 54.95□□□□□ -1.622e-6■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-226ENST00000581562 571 ntTSL 319.47■□□□□ 0.715e-7■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-208ENST00000577857 566 ntTSL 419.32■□□□□ 0.685e-7■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-217ENST00000579286 933 ntTSL 319.32■□□□□ 0.685e-7■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-233ENST00000583312 799 ntTSL 319.32■□□□□ 0.685e-7■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-221ENST00000579886 502 ntTSL 517.33■□□□□ 0.375e-7■■□□□ 13.2
PRPF8Q6P2Q9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.48e-7■■□□□ 13.2
PRPF8Q6P2Q9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.228e-7■■□□□ 13.2
PRPF8Q6P2Q9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.28e-7■■□□□ 13.2
PRPF8Q6P2Q9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.358e-7■■□□□ 13.2
PRPF8Q6P2Q9 WDR18-203ENST00000586317 831 ntTSL 217.54■□□□□ 0.45e-10■■□□□ 13.2
PRPF8Q6P2Q9 STAT5A-210ENST00000590726 835 ntTSL 319.52■□□□□ 0.713e-7■■□□□ 13.2
PRPF8Q6P2Q9 CRNKL1-204ENST00000490910 4183 ntTSL 1 (best)8.73□□□□□ -1.015e-7■■□□□ 13.2
PRPF8Q6P2Q9 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.8□□□□□ -1.165e-7■■□□□ 13.2
PRPF8Q6P2Q9 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC7.1□□□□□ -1.275e-7■■□□□ 13.2
PRPF8Q6P2Q9 HMGXB3-204ENST00000513318 749 ntTSL 36.43□□□□□ -1.383e-6■■□□□ 13.2
PRPF8Q6P2Q9 CRNKL1-205ENST00000496549 4093 ntTSL 1 (best)5.88□□□□□ -1.475e-7■■□□□ 13.2
PRPF8Q6P2Q9 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.515e-7■■□□□ 13.2
PRPF8Q6P2Q9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.529e-8■■□□□ 13.2
PRPF8Q6P2Q9 ZNF444-206ENST00000587664 568 ntTSL 316.69■□□□□ 0.269e-8■■□□□ 13.2
PRPF8Q6P2Q9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.249e-8■■□□□ 13.2
PRPF8Q6P2Q9 CS-205ENST00000546891 911 ntTSL 27.22□□□□□ -1.252e-6■■□□□ 13.2
PRPF8Q6P2Q9 ACADVL-227ENST00000582056 738 ntTSL 217.19■□□□□ 0.341e-8■■□□□ 13.2
PRPF8Q6P2Q9 ASL-208ENST00000488343 198 ntTSL 312.91□□□□□ -0.342e-9■■□□□ 13.2
PRPF8Q6P2Q9 JMJD6-207ENST00000591460 667 ntTSL 29.83□□□□□ -0.842e-8■■□□□ 13.2
PRPF8Q6P2Q9 JMJD6-206ENST00000589982 467 ntTSL 29.77□□□□□ -0.852e-8■■□□□ 13.2
PRPF8Q6P2Q9 MYRF-205ENST00000537318 1844 ntTSL 213.22□□□□□ -0.292e-7■■□□□ 13.2
PRPF8Q6P2Q9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.083e-15■■□□□ 13.2
PRPF8Q6P2Q9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.273e-15■■□□□ 13.2
PRPF8Q6P2Q9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.353e-15■■□□□ 13.2
PRPF8Q6P2Q9 TTC17-203ENST00000418561 575 ntTSL 34.49□□□□□ -1.692e-7■■□□□ 13.2
PRPF8Q6P2Q9 TTC17-209ENST00000529140 1017 ntTSL 24.28□□□□□ -1.722e-7■■□□□ 13.2
PRPF8Q6P2Q9 TTC17-207ENST00000525543 3142 ntTSL 23.89□□□□□ -1.792e-7■■□□□ 13.2
PRPF8Q6P2Q9 LRP5-202ENST00000528714 534 ntTSL 313.43□□□□□ -0.263e-8■■□□□ 13.2
PRPF8Q6P2Q9 RUNX1-204ENST00000399237 822 ntTSL 518.28■□□□□ 0.526e-7■■□□□ 13.2
PRPF8Q6P2Q9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.91□□□□□ -0.346e-7■■□□□ 13.2
Retrieved 100 of 73,762 protein–RNA pairs in 1365.2 ms