RNA–Protein interactions for RNA: ENST00000579886.2

ACADVL-221, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-221ENST00000579886 NISCHQ9Y2I1 1504 aa50.36■■■■■ 5.65
ACADVL-221ENST00000579886 CCDC180Q9P1Z9 1646 aa44.72■■■■■ 4.75
ACADVL-221ENST00000579886 ABCC9O60706 1549 aa43.85■■■■■ 4.61
ACADVL-221ENST00000579886 RB1CC1Q8TDY2 1594 aa42.15■■■■■ 4.34
ACADVL-221ENST00000579886 NACADO15069 1562 aa42.14■■■■■ 4.34
ACADVL-221ENST00000579886 DCAF8L2P0C7V8 631 aa42.01■■■■■ 4.32
ACADVL-221ENST00000579886 MYO15BQ96JP2 1530 aa41.96■■■■■ 4.31
ACADVL-221ENST00000579886 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
ACADVL-221ENST00000579886 DCAF1Q9Y4B6 1507 aa41.72■■■■■ 4.27
ACADVL-221ENST00000579886 UNC13AQ9UPW8 1703 aa41.05■■■■■ 4.16
ACADVL-221ENST00000579886 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.161e-8■■■■■ 33.4
ACADVL-221ENST00000579886 BICRAQ9NZM4 1560 aa40.92■■■■■ 4.14
ACADVL-221ENST00000579886 SCRIBQ14160 1630 aa40.73■■■■■ 4.11
ACADVL-221ENST00000579886 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
ACADVL-221ENST00000579886 DNAJC5BQ9UF47 199 aa40.47■■■■■ 4.07
ACADVL-221ENST00000579886 EIF4G1Q04637 1599 aaKnown RBP39.83■■■■□ 3.97
ACADVL-221ENST00000579886 CC2D2AQ9P2K1 1620 aa39.65■■■■□ 3.94
ACADVL-221ENST00000579886 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
ACADVL-221ENST00000579886 SMARCA4P51532 1647 aa39.02■■■■□ 3.84
ACADVL-221ENST00000579886 BAZ1AQ9NRL2 1556 aaPredicted RBP39■■■■□ 3.83
ACADVL-221ENST00000579886 NCAPD3P42695 1498 aa38.97■■■■□ 3.83
ACADVL-221ENST00000579886 ATAD2BQ9ULI0 1458 aa38.92■■■■□ 3.82
ACADVL-221ENST00000579886 SMARCA2P51531 1590 aa38.82■■■■□ 3.8
ACADVL-221ENST00000579886 MROH2BQ7Z745 1585 aa38.78■■■■□ 3.8
ACADVL-221ENST00000579886 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
ACADVL-221ENST00000579886 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
ACADVL-221ENST00000579886 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
ACADVL-221ENST00000579886 RSF1Q96T23 1441 aaPredicted RBP38.36■■■■□ 3.73
ACADVL-221ENST00000579886 WIZO95785 1651 aa38.27■■■■□ 3.72
ACADVL-221ENST00000579886 NESP48681 1621 aa37.94■■■■□ 3.66
ACADVL-221ENST00000579886 TOP2AP11388 1531 aaKnown RBP37.92■■■■□ 3.66
ACADVL-221ENST00000579886 LAMC3Q9Y6N6 1575 aa37.85■■■■□ 3.65
ACADVL-221ENST00000579886 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
ACADVL-221ENST00000579886 ERCC6Q03468 1493 aa37.78■■■■□ 3.64
ACADVL-221ENST00000579886 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
ACADVL-221ENST00000579886 CFTRP13569 1480 aa37.55■■■■□ 3.6
ACADVL-221ENST00000579886 CCDC88BA6NC98 1476 aa37.52■■■■□ 3.6
ACADVL-221ENST00000579886 CUX2O14529 1486 aa37.51■■■■□ 3.59
ACADVL-221ENST00000579886 KIF21AQ7Z4S6 1674 aa37.36■■■■□ 3.57
ACADVL-221ENST00000579886 THOC2Q8NI27 1593 aaKnown RBP37.35■■■■□ 3.57
ACADVL-221ENST00000579886 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
ACADVL-221ENST00000579886 CEP164Q9UPV0 1460 aa37.24■■■■□ 3.55
ACADVL-221ENST00000579886 MRC2Q9UBG0 1479 aa37.22■■■■□ 3.55
ACADVL-221ENST00000579886 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
ACADVL-221ENST00000579886 WDR62O43379 1518 aa37.11■■■■□ 3.53
ACADVL-221ENST00000579886 PRDM2Q13029 1718 aa37.01■■■■□ 3.51
ACADVL-221ENST00000579886 URB2Q14146 1524 aaKnown RBP36.94■■■■□ 3.5
ACADVL-221ENST00000579886 ABCC8Q09428 1581 aa36.72■■■■□ 3.47
ACADVL-221ENST00000579886 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
ACADVL-221ENST00000579886 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
ACADVL-221ENST00000579886 DNAJC5Q9H3Z4 198 aa36.54■■■■□ 3.44
ACADVL-221ENST00000579886 IFT140Q96RY7 1462 aa36.5■■■■□ 3.43
ACADVL-221ENST00000579886 POLA1P09884 1462 aaPredicted RBP36.38■■■■□ 3.41
ACADVL-221ENST00000579886 CUX1P39880 1505 aa36.38■■■■□ 3.41
ACADVL-221ENST00000579886 ZNF608Q9ULD9 1512 aaPredicted RBP36.33■■■■□ 3.41
ACADVL-221ENST00000579886 TARBP1Q13395 1621 aaKnown RBP36.28■■■■□ 3.4
ACADVL-221ENST00000579886 SOGA1O94964 1423 aa36.25■■■■□ 3.39
ACADVL-221ENST00000579886 FGD5Q6ZNL6 1462 aa36.25■■■■□ 3.39
ACADVL-221ENST00000579886 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
ACADVL-221ENST00000579886 WRNQ14191 1432 aaPredicted RBP eCLIP36.13■■■■□ 3.37
ACADVL-221ENST00000579886 AQRO60306 1485 aaKnown RBP eCLIP36.12■■■■□ 3.373e-8■■■■□ 24.7
ACADVL-221ENST00000579886 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
ACADVL-221ENST00000579886 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
ACADVL-221ENST00000579886 TOP2BQ02880 1626 aa36.03■■■■□ 3.36
ACADVL-221ENST00000579886 WDR97A6NE52 1622 aa36.01■■■■□ 3.36
ACADVL-221ENST00000579886 SYNJ1O43426 1573 aa35.98■■■■□ 3.35
ACADVL-221ENST00000579886 BIVM-ERCC5R4GMW8 1640 aa35.98■■■■□ 3.35
ACADVL-221ENST00000579886 OSCARQ8IYS5 282 aa35.97■■■■□ 3.35
ACADVL-221ENST00000579886 ABCA10Q8WWZ4 1543 aa35.95■■■■□ 3.35
ACADVL-221ENST00000579886 GRIN2BQ13224 1484 aa35.83■■■■□ 3.33
ACADVL-221ENST00000579886 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
ACADVL-221ENST00000579886 SNAPC4Q5SXM2 1469 aa35.75■■■■□ 3.31
ACADVL-221ENST00000579886 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
ACADVL-221ENST00000579886 MAGI1Q96QZ7 1491 aaPredicted RBP35.74■■■■□ 3.31
ACADVL-221ENST00000579886 FBLN2P98095 1184 aa35.65■■■■□ 3.3
ACADVL-221ENST00000579886 SYNJ2O15056 1496 aa35.61■■■■□ 3.29
ACADVL-221ENST00000579886 CHMP7Q8WUX9 453 aaPredicted RBP35.6■■■■□ 3.29
ACADVL-221ENST00000579886 CHD1O14646 1710 aa35.58■■■■□ 3.29
ACADVL-221ENST00000579886 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
ACADVL-221ENST00000579886 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
ACADVL-221ENST00000579886 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
ACADVL-221ENST00000579886 ADAMTS12P58397 1594 aa35.39■■■■□ 3.26
ACADVL-221ENST00000579886 KIF27Q86VH2 1401 aa35.39■■■■□ 3.26
ACADVL-221ENST00000579886 CLASP1Q7Z460 1538 aa35.36■■■■□ 3.25
ACADVL-221ENST00000579886 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
ACADVL-221ENST00000579886 IGF1RP08069 1367 aa35.33■■■■□ 3.25
ACADVL-221ENST00000579886 ARHGEF11O15085 1522 aa35.32■■■■□ 3.24
ACADVL-221ENST00000579886 RIMBP3CA6NJZ7 1639 aa35.27■■■■□ 3.24
ACADVL-221ENST00000579886 RIMBP3BA6NNM3 1639 aa35.27■■■■□ 3.24
ACADVL-221ENST00000579886 RIMBP3Q9UFD9 1639 aa35.27■■■■□ 3.24
ACADVL-221ENST00000579886 NUP160Q12769 1436 aa35.25■■■■□ 3.23
ACADVL-221ENST00000579886 TRIM41Q8WV44 630 aa35.2■■■■□ 3.23
ACADVL-221ENST00000579886 CEP170Q5SW79 1584 aa35.14■■■■□ 3.22
ACADVL-221ENST00000579886 CUL7Q14999 1698 aa35.08■■■■□ 3.21
ACADVL-221ENST00000579886 CARMIL1Q5VZK9 1371 aa35.06■■■■□ 3.2
ACADVL-221ENST00000579886 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
ACADVL-221ENST00000579886 CYB5RLQ6IPT4 315 aa35.02■■■■□ 3.2
ACADVL-221ENST00000579886 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
ACADVL-221ENST00000579886 SHROOM2Q13796 1616 aa34.93■■■■□ 3.18
ACADVL-221ENST00000579886 JPH4Q96JJ6 628 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms