RNA–Protein interactions for RNA: ENST00000531955.5

DHDDS-224, Transcript of dehydrodolichyl diphosphate synthase subunit, human

TSL 5

Gene DHDDS, Length 559 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHDDS-224	ENST00000531955	NISCH	Q9Y2I1	1504 aa		14.49	□□□□□ -0.09
DHDDS-224	ENST00000531955	CCDC180	Q9P1Z9	1646 aa		12.63	□□□□□ -0.39
DHDDS-224	ENST00000531955	DNAJC5B	Q9UF47	199 aa		12.57	□□□□□ -0.4
DHDDS-224	ENST00000531955	ABCC9	O60706	1549 aa		12.56	□□□□□ -0.4
DHDDS-224	ENST00000531955	CHIC1	Q5VXU3	224 aa		12.55	□□□□□ -0.4
DHDDS-224	ENST00000531955	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.45	□□□□□ -0.42
DHDDS-224	ENST00000531955	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.24	□□□□□ -0.45
DHDDS-224	ENST00000531955	DNAJC5	Q9H3Z4	198 aa		12.2	□□□□□ -0.46
DHDDS-224	ENST00000531955	DCAF1	Q9Y4B6	1507 aa		12.02	□□□□□ -0.48
DHDDS-224	ENST00000531955	MYO15B	Q96JP2	1530 aa		11.83	□□□□□ -0.52
DHDDS-224	ENST00000531955	SHROOM4	Q9ULL8	1493 aa		11.81	□□□□□ -0.52
DHDDS-224	ENST00000531955	DCAF8L2	P0C7V8	631 aa		11.71	□□□□□ -0.53
DHDDS-224	ENST00000531955	NACAD	O15069	1562 aa		11.68	□□□□□ -0.54
DHDDS-224	ENST00000531955	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
DHDDS-224	ENST00000531955	SCRIB	Q14160	1630 aa		11.58	□□□□□ -0.56
DHDDS-224	ENST00000531955	RB1CC1	Q8TDY2	1594 aa		11.55	□□□□□ -0.56
DHDDS-224	ENST00000531955	TRIM41	Q8WV44	630 aa		11.42	□□□□□ -0.58
DHDDS-224	ENST00000531955	CECR2	Q9BXF3	1484 aa		11.39	□□□□□ -0.59
DHDDS-224	ENST00000531955	UNC13A	Q9UPW8	1703 aa		11.36	□□□□□ -0.59
DHDDS-224	ENST00000531955	SUPT5H	O00267	1087 aa	Known RBP	11.36	□□□□□ -0.59
DHDDS-224	ENST00000531955	RSF1	Q96T23	1441 aa	Predicted RBP	11.26	□□□□□ -0.61
DHDDS-224	ENST00000531955	BICRA	Q9NZM4	1560 aa		11.24	□□□□□ -0.61
DHDDS-224	ENST00000531955	CC2D2A	Q9P2K1	1620 aa		11.22	□□□□□ -0.61
DHDDS-224	ENST00000531955	PHF23	Q9BUL5	403 aa	Predicted RBP	11.21	□□□□□ -0.61
DHDDS-224	ENST00000531955	MROH2B	Q7Z745	1585 aa		11.2	□□□□□ -0.62
DHDDS-224	ENST00000531955	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.18	□□□□□ -0.62
DHDDS-224	ENST00000531955	SMARCA4	P51532	1647 aa		11.13	□□□□□ -0.63
DHDDS-224	ENST00000531955	CUX2	O14529	1486 aa		11.13	□□□□□ -0.63
DHDDS-224	ENST00000531955	WIZ	O95785	1651 aa		11.11	□□□□□ -0.63
DHDDS-224	ENST00000531955	TOP2A	P11388	1531 aa	Known RBP	11.03	□□□□□ -0.64
DHDDS-224	ENST00000531955	PEG3	Q9GZU2	1588 aa		11.02	□□□□□ -0.65
DHDDS-224	ENST00000531955	EIF4G1	Q04637	1599 aa	Known RBP	10.97	□□□□□ -0.65
DHDDS-224	ENST00000531955	ERCC6	Q03468	1493 aa		10.94	□□□□□ -0.66
DHDDS-224	ENST00000531955	SMARCA2	P51531	1590 aa		10.93	□□□□□ -0.66
DHDDS-224	ENST00000531955	ATAD2B	Q9ULI0	1458 aa		10.88	□□□□□ -0.67
DHDDS-224	ENST00000531955	CCDC88B	A6NC98	1476 aa		10.87	□□□□□ -0.67
DHDDS-224	ENST00000531955	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.81	□□□□□ -0.68
DHDDS-224	ENST00000531955	HMGXB3	Q12766	1538 aa		10.81	□□□□□ -0.68
DHDDS-224	ENST00000531955	NCAPD3	P42695	1498 aa		10.76	□□□□□ -0.69
DHDDS-224	ENST00000531955	ABCC8	Q09428	1581 aa		10.69	□□□□□ -0.7
DHDDS-224	ENST00000531955	ILDR1	Q86SU0	546 aa	Predicted RBP	10.67	□□□□□ -0.7
DHDDS-224	ENST00000531955	TRH	P20396	242 aa	Predicted RBP	10.65	□□□□□ -0.7
DHDDS-224	ENST00000531955	SYNJ1	O43426	1573 aa		10.6	□□□□□ -0.71
DHDDS-224	ENST00000531955	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.58	□□□□□ -0.72
DHDDS-224	ENST00000531955	PRDM2	Q13029	1718 aa		10.58	□□□□□ -0.72
DHDDS-224	ENST00000531955	CFTR	P13569	1480 aa		10.57	□□□□□ -0.72
DHDDS-224	ENST00000531955	OSCAR	Q8IYS5	282 aa		10.56	□□□□□ -0.72
DHDDS-224	ENST00000531955	SENP3	Q9H4L4	574 aa	Predicted RBP	10.55	□□□□□ -0.72
DHDDS-224	ENST00000531955	BIVM-ERCC5	R4GMW8	1640 aa		10.55	□□□□□ -0.72
DHDDS-224	ENST00000531955	TOP2B	Q02880	1626 aa		10.54	□□□□□ -0.72
DHDDS-224	ENST00000531955	LOC105371045	A0A1W2PR82	267 aa		10.53	□□□□□ -0.72
DHDDS-224	ENST00000531955	EHMT2	Q96KQ7	1210 aa		10.52	□□□□□ -0.73
DHDDS-224	ENST00000531955	EEA1	Q15075	1411 aa		10.51	□□□□□ -0.73
DHDDS-224	ENST00000531955	NES	P48681	1621 aa		10.51	□□□□□ -0.73
DHDDS-224	ENST00000531955	PLPPR3	Q6T4P5	718 aa		10.5	□□□□□ -0.73
DHDDS-224	ENST00000531955	THOC2	Q8NI27	1593 aa	Known RBP	10.5	□□□□□ -0.73
DHDDS-224	ENST00000531955	SOGA1	O94964	1423 aa		10.49	□□□□□ -0.73
DHDDS-224	ENST00000531955	CUX1	P39880	1505 aa		10.48	□□□□□ -0.73
DHDDS-224	ENST00000531955	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.47	□□□□□ -0.73
DHDDS-224	ENST00000531955	CADPS	Q9ULU8	1353 aa		10.47	□□□□□ -0.73
DHDDS-224	ENST00000531955	RUSC2	Q8N2Y8	1516 aa		10.45	□□□□□ -0.74
DHDDS-224	ENST00000531955	RIMBP3C	A6NJZ7	1639 aa		10.44	□□□□□ -0.74
DHDDS-224	ENST00000531955	RIMBP3B	A6NNM3	1639 aa		10.44	□□□□□ -0.74
DHDDS-224	ENST00000531955	RIMBP3	Q9UFD9	1639 aa		10.44	□□□□□ -0.74
DHDDS-224	ENST00000531955	KIF21B	O75037	1637 aa		10.42	□□□□□ -0.74
DHDDS-224	ENST00000531955	CYB5RL	Q6IPT4	315 aa		10.41	□□□□□ -0.74
DHDDS-224	ENST00000531955	LAMC3	Q9Y6N6	1575 aa		10.39	□□□□□ -0.75
DHDDS-224	ENST00000531955	GOLGA3	Q08378	1498 aa		10.37	□□□□□ -0.75
DHDDS-224	ENST00000531955	FANCD2	Q9BXW9	1451 aa		10.37	□□□□□ -0.75
DHDDS-224	ENST00000531955	CEP164	Q9UPV0	1460 aa		10.36	□□□□□ -0.75
DHDDS-224	ENST00000531955	CSRNP3	Q8WYN3	585 aa		10.35	□□□□□ -0.75
DHDDS-224	ENST00000531955	TNIK	Q9UKE5	1360 aa		10.34	□□□□□ -0.75
DHDDS-224	ENST00000531955	DNMBP	Q6XZF7	1577 aa		10.34	□□□□□ -0.75
DHDDS-224	ENST00000531955	ARHGEF11	O15085	1522 aa		10.33	□□□□□ -0.76
DHDDS-224	ENST00000531955	FGD5	Q6ZNL6	1462 aa		10.32	□□□□□ -0.76
DHDDS-224	ENST00000531955	ERICH3	Q5RHP9	1530 aa		10.32	□□□□□ -0.76
DHDDS-224	ENST00000531955	CEP162	Q5TB80	1403 aa		10.32	□□□□□ -0.76
DHDDS-224	ENST00000531955	PRX	Q9BXM0	1461 aa		10.3	□□□□□ -0.76
DHDDS-224	ENST00000531955	TOPBP1	Q92547	1522 aa		10.29	□□□□□ -0.76
DHDDS-224	ENST00000531955	KIF27	Q86VH2	1401 aa		10.29	□□□□□ -0.76
DHDDS-224	ENST00000531955	RAPGEF2	Q9Y4G8	1499 aa		10.29	□□□□□ -0.76
DHDDS-224	ENST00000531955	KIF21A	Q7Z4S6	1674 aa		10.27	□□□□□ -0.77
DHDDS-224	ENST00000531955	URB2	Q14146	1524 aa	Known RBP	10.27	□□□□□ -0.77
DHDDS-224	ENST00000531955	WDR97	A6NE52	1622 aa		10.26	□□□□□ -0.77
DHDDS-224	ENST00000531955	PDS5B	Q9NTI5	1447 aa		10.26	□□□□□ -0.77
DHDDS-224	ENST00000531955	POLA1	P09884	1462 aa	Predicted RBP	10.26	□□□□□ -0.77
DHDDS-224	ENST00000531955	ABCA10	Q8WWZ4	1543 aa		10.24	□□□□□ -0.77
DHDDS-224	ENST00000531955	MRC2	Q9UBG0	1479 aa		10.21	□□□□□ -0.78
DHDDS-224	ENST00000531955	KCNA4	P22459	653 aa		10.2	□□□□□ -0.78
DHDDS-224	ENST00000531955	ABCA5	Q8WWZ7	1642 aa		10.19	□□□□□ -0.78
DHDDS-224	ENST00000531955	RAD54L2	Q9Y4B4	1467 aa		10.19	□□□□□ -0.78
DHDDS-224	ENST00000531955	SLC24A1	O60721	1099 aa		10.19	□□□□□ -0.78
DHDDS-224	ENST00000531955	UBTF	P17480	764 aa	Known RBP	10.19	□□□□□ -0.78
DHDDS-224	ENST00000531955	CLIP1	P30622	1438 aa		10.18	□□□□□ -0.78
DHDDS-224	ENST00000531955	IGF1R	P08069	1367 aa		10.18	□□□□□ -0.78
DHDDS-224	ENST00000531955	PCGF6	Q9BYE7	350 aa		10.17	□□□□□ -0.78
DHDDS-224	ENST00000531955	CUL7	Q14999	1698 aa		10.17	□□□□□ -0.78
DHDDS-224	ENST00000531955	WDR62	O43379	1518 aa		10.17	□□□□□ -0.78
DHDDS-224	ENST00000531955	ARAP1	Q96P48	1450 aa		10.17	□□□□□ -0.78
DHDDS-224	ENST00000531955	TARBP1	Q13395	1621 aa	Known RBP	10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms